RNA–Protein interactions for RNA: ENST00000492275.5

TTC3-223, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 3

Gene TTC3, Length 769 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-223ENST00000492275 PRSS2P07478 247 aa16.3■□□□□ 0.2
TTC3-223ENST00000492275 STPG4Q8N801 248 aa16.3■□□□□ 0.2
TTC3-223ENST00000492275 IFI27L1Q96BM0 104 aa16.3■□□□□ 0.2
TTC3-223ENST00000492275 LINC00474Q9P2X8 69 aa16.3■□□□□ 0.2
TTC3-223ENST00000492275 C6orf226Q5I0X4 101 aa16.29■□□□□ 0.2
TTC3-223ENST00000492275 PLA2G1BP04054 148 aaKnown RBP16.28■□□□□ 0.2
TTC3-223ENST00000492275 TRBV30A0A0K0K1B3 111 aa16.27■□□□□ 0.2
TTC3-223ENST00000492275 SPINK8P0C7L1 97 aa16.27■□□□□ 0.2
TTC3-223ENST00000492275 KRTAP10-4P60372 401 aaPredicted RBP16.27■□□□□ 0.2
TTC3-223ENST00000492275 TLX1NBP0CAT3 122 aa16.26■□□□□ 0.19
TTC3-223ENST00000492275 ZNF22P17026 224 aaPredicted RBP16.26■□□□□ 0.19
TTC3-223ENST00000492275 RPL18AQ02543 176 aaKnown RBP16.26■□□□□ 0.19
TTC3-223ENST00000492275 INAFM2P0DMQ5 153 aa16.25■□□□□ 0.19
TTC3-223ENST00000492275 CKS1BP61024 79 aa16.25■□□□□ 0.19
TTC3-223ENST00000492275 TRAV12-1A0A0B4J245 112 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 C11orf86A6NJI1 115 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 H3BRM9 83 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BKO60814 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BJP06899 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BOP23527 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BBP33778 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BDP58876 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BCP62807 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST2H2BEQ16778 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.24■□□□□ 0.19
TTC3-223ENST00000492275 Q6ZRP5 223 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BHQ93079 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BNQ99877 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 HIST1H2BMQ99879 126 aa16.24■□□□□ 0.19
TTC3-223ENST00000492275 CHTOPQ9Y3Y2 248 aaKnown RBP16.24■□□□□ 0.19
TTC3-223ENST00000492275 C9orf116Q5BN46 136 aaPredicted RBP16.23■□□□□ 0.19
TTC3-223ENST00000492275 COX7B2Q8TF08 81 aa16.23■□□□□ 0.19
TTC3-223ENST00000492275 A0A1W2PNN7 141 aa16.22■□□□□ 0.19
TTC3-223ENST00000492275 LEPROTL1O95214 131 aa16.21■□□□□ 0.19
TTC3-223ENST00000492275 S100A1P23297 94 aa16.2■□□□□ 0.18
TTC3-223ENST00000492275 RPL37AP61513 92 aaKnown RBP16.2■□□□□ 0.18
TTC3-223ENST00000492275 IGLV5-39A0A0G2JS06 123 aa16.19■□□□□ 0.18
TTC3-223ENST00000492275 F8VRH5 84 aa16.19■□□□□ 0.18
TTC3-223ENST00000492275 SRRM2Q9UQ35 2752 aaKnown RBP16.19■□□□□ 0.18
TTC3-223ENST00000492275 NDUFC2-KCTD14E9PQ53 114 aa16.18■□□□□ 0.18
TTC3-223ENST00000492275 ATP6V1G1O75348 118 aa16.18■□□□□ 0.18
TTC3-223ENST00000492275 CXCL5P42830 114 aa16.18■□□□□ 0.18
TTC3-223ENST00000492275 GAGE2EQ4V326 116 aa16.18■□□□□ 0.18
TTC3-223ENST00000492275 GAGE2DQ9UEU5 116 aa16.18■□□□□ 0.18
TTC3-223ENST00000492275 TMEM170BQ5T4T1 132 aa16.17■□□□□ 0.18
TTC3-223ENST00000492275 FABP4P15090 132 aa16.16■□□□□ 0.18
TTC3-223ENST00000492275 HSPB8Q9UJY1 196 aa16.14■□□□□ 0.17
TTC3-223ENST00000492275 H0Y8G0 127 aa16.13■□□□□ 0.17
TTC3-223ENST00000492275 ODF1Q14990 250 aa16.13■□□□□ 0.17
TTC3-223ENST00000492275 C7orf33Q8WU49 177 aa16.13■□□□□ 0.17
TTC3-223ENST00000492275 FAM168BA1KXE4 195 aa16.12■□□□□ 0.17
TTC3-223ENST00000492275 FLG2Q5D862 2391 aaPredicted RBP16.11■□□□□ 0.17
TTC3-223ENST00000492275 C9orf129Q5T035 196 aaKnown RBP16.11■□□□□ 0.17
TTC3-223ENST00000492275 TMEM223A0PJW6 202 aa16.1■□□□□ 0.17
TTC3-223ENST00000492275 KRTAP7-1Q8IUC3 87 aa16.09■□□□□ 0.17
TTC3-223ENST00000492275 HNRNPA3P51991 378 aaKnown RBP16.08■□□□□ 0.16
TTC3-223ENST00000492275 COA6Q5JTJ3 125 aaKnown RBP16.06■□□□□ 0.16
TTC3-223ENST00000492275 PHF5AQ7RTV0 110 aaKnown RBP16.06■□□□□ 0.16
TTC3-223ENST00000492275 FAM19A5Q7Z5A7 132 aaPredicted RBP16.05■□□□□ 0.16
TTC3-223ENST00000492275 XAGE1AQ9HD64 81 aa16.05■□□□□ 0.16
TTC3-223ENST00000492275 PKHD1L1Q86WI1 4243 aa16.04■□□□□ 0.16
TTC3-223ENST00000492275 PRR3P79522 188 aaKnown RBP16.03■□□□□ 0.16
TTC3-223ENST00000492275 PMCHL2Q9BQD1 86 aa16.03■□□□□ 0.16
TTC3-223ENST00000492275 MAP1LC3CQ9BXW4 147 aa16.03■□□□□ 0.16
TTC3-223ENST00000492275 ZNF625Q96I27 306 aaPredicted RBP16.02■□□□□ 0.16
TTC3-223ENST00000492275 SERTAD4-AS1Q5TG53 156 aa16■□□□□ 0.15
TTC3-223ENST00000492275 DPM2O94777 84 aa15.99■□□□□ 0.15
TTC3-223ENST00000492275 PLNP26678 52 aa15.99■□□□□ 0.15
TTC3-223ENST00000492275 PFN2P35080 140 aa15.98■□□□□ 0.15
TTC3-223ENST00000492275 ERG28Q9UKR5 140 aa15.98■□□□□ 0.15
TTC3-223ENST00000492275 SYS1-DBNDD2H3BUS1 97 aa15.97■□□□□ 0.15
TTC3-223ENST00000492275 KRTAP11-1Q8IUC1 163 aa15.97■□□□□ 0.15
TTC3-223ENST00000492275 M0QXV9 152 aa15.96■□□□□ 0.15
TTC3-223ENST00000492275 IGKCP01834 107 aa15.96■□□□□ 0.15
TTC3-223ENST00000492275 SFTA2Q6UW10 78 aa15.96■□□□□ 0.15
TTC3-223ENST00000492275 PSORS1C2Q9UIG4 136 aa15.95■□□□□ 0.14
TTC3-223ENST00000492275 MYCBP2O75592 4640 aa15.94■□□□□ 0.14
TTC3-223ENST00000492275 COX17Q14061 63 aa15.93■□□□□ 0.14
TTC3-223ENST00000492275 C22orf24Q9Y442 160 aa15.93■□□□□ 0.14
TTC3-223ENST00000492275 TSPEAR-AS2P59090 65 aa15.91■□□□□ 0.14
TTC3-223ENST00000492275 PLA2G2DQ9UNK4 145 aa15.91■□□□□ 0.14
TTC3-223ENST00000492275 LEPROTO15243 131 aa15.9■□□□□ 0.14
TTC3-223ENST00000492275 C3orf79P0CE67 100 aa15.9■□□□□ 0.14
TTC3-223ENST00000492275 LINC01545Q5VT33 79 aa15.89■□□□□ 0.13
TTC3-223ENST00000492275 PET117Q6UWS5 81 aa15.89■□□□□ 0.13
TTC3-223ENST00000492275 SND1-IT1Q9HBX3 110 aa15.89■□□□□ 0.13
TTC3-223ENST00000492275 KRTAP29-1A8MX34 341 aaPredicted RBP15.88■□□□□ 0.13
TTC3-223ENST00000492275 SRSF9Q13242 221 aaKnown RBP eCLIP15.88■□□□□ 0.13
TTC3-223ENST00000492275 PLEKHB2Q96CS7 222 aa15.88■□□□□ 0.13
TTC3-223ENST00000492275 NDUFA12Q9UI09 145 aa15.88■□□□□ 0.13
TTC3-223ENST00000492275 HERVK_113P61574 105 aa15.87■□□□□ 0.13
TTC3-223ENST00000492275 HERV-K104P63124 156 aa15.86■□□□□ 0.13
TTC3-223ENST00000492275 UBE2BP63146 152 aa15.86■□□□□ 0.13
TTC3-223ENST00000492275 C1orf137Q5JT78 98 aa15.86■□□□□ 0.13
TTC3-223ENST00000492275 TP73-AS1Q9UF72 201 aa15.86■□□□□ 0.13
TTC3-223ENST00000492275 LRP1Q07954 4544 aaKnown RBP15.85■□□□□ 0.13
TTC3-223ENST00000492275 A0A0U1RRA0 63 aa15.85■□□□□ 0.13
TTC3-223ENST00000492275 J3QQQ9 107 aa15.85■□□□□ 0.13
TTC3-223ENST00000492275 LINC00158P58513 81 aa15.85■□□□□ 0.13
TTC3-223ENST00000492275 IGLV5-37A0A075B6J1 123 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms