RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 Q8IZM0 81 aa9.55□□□□□ -0.88
SS18L1-204ENST00000491916 Q6ZRP5 223 aa9.54□□□□□ -0.88
SS18L1-204ENST00000491916 STPG4Q8N801 248 aa9.54□□□□□ -0.88
SS18L1-204ENST00000491916 A0A1W2PNN7 141 aa9.53□□□□□ -0.88
SS18L1-204ENST00000491916 ZNF22P17026 224 aaPredicted RBP9.53□□□□□ -0.88
SS18L1-204ENST00000491916 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
SS18L1-204ENST00000491916 C9orf116Q5BN46 136 aaPredicted RBP9.53□□□□□ -0.88
SS18L1-204ENST00000491916 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
SS18L1-204ENST00000491916 DPH3Q96FX2 82 aa9.53□□□□□ -0.88
SS18L1-204ENST00000491916 LINC00474Q9P2X8 69 aa9.53□□□□□ -0.88
SS18L1-204ENST00000491916 TRBV30A0A0K0K1B3 111 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 C11orf86A6NJI1 115 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 HSBP1O75506 76 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
SS18L1-204ENST00000491916 SPINK8P0C7L1 97 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 INAFM2P0DMQ5 153 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 NDUFA6P56556 154 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 TOMM7Q9P0U1 55 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 PKIGQ9Y2B9 76 aa9.52□□□□□ -0.89
SS18L1-204ENST00000491916 TRAV12-1A0A0B4J245 112 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 IGLV5-39A0A0G2JS06 123 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BKO60814 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BJP06899 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BOP23527 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BBP33778 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BDP58876 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BCP62807 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST2H2BEQ16778 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 C6orf226Q5I0X4 101 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BHQ93079 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 PACRGQ96M98 296 aaPredicted RBP9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BNQ99877 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 HIST1H2BMQ99879 126 aa9.51□□□□□ -0.89
SS18L1-204ENST00000491916 PRSS2P07478 247 aa9.5□□□□□ -0.89
SS18L1-204ENST00000491916 HNRNPA3P51991 378 aaKnown RBP9.5□□□□□ -0.89
SS18L1-204ENST00000491916 RPL18AQ02543 176 aaKnown RBP9.5□□□□□ -0.89
SS18L1-204ENST00000491916 KRTAP7-1Q8IUC3 87 aa9.5□□□□□ -0.89
SS18L1-204ENST00000491916 HERC1Q15751 4861 aa9.49□□□□□ -0.89
SS18L1-204ENST00000491916 RPL37AP61513 92 aaKnown RBP9.49□□□□□ -0.89
SS18L1-204ENST00000491916 COX7B2Q8TF08 81 aa9.49□□□□□ -0.89
SS18L1-204ENST00000491916 CHTOPQ9Y3Y2 248 aaKnown RBP9.48□□□□□ -0.89
SS18L1-204ENST00000491916 FAM168BA1KXE4 195 aa9.47□□□□□ -0.89
SS18L1-204ENST00000491916 NDUFC2-KCTD14E9PQ53 114 aa9.47□□□□□ -0.89
SS18L1-204ENST00000491916 F8VRH5 84 aa9.47□□□□□ -0.89
SS18L1-204ENST00000491916 CKS1BP61024 79 aa9.47□□□□□ -0.89
SS18L1-204ENST00000491916 H3BRM9 83 aa9.46□□□□□ -0.9
SS18L1-204ENST00000491916 LEPROTL1O95214 131 aa9.46□□□□□ -0.9
SS18L1-204ENST00000491916 CXCL5P42830 114 aa9.46□□□□□ -0.9
SS18L1-204ENST00000491916 ODF1Q14990 250 aa9.46□□□□□ -0.9
SS18L1-204ENST00000491916 C9orf129Q5T035 196 aaKnown RBP9.46□□□□□ -0.9
SS18L1-204ENST00000491916 ATP6V1G1O75348 118 aa9.45□□□□□ -0.9
SS18L1-204ENST00000491916 GAGE2EQ4V326 116 aa9.45□□□□□ -0.9
SS18L1-204ENST00000491916 GAGE2DQ9UEU5 116 aa9.45□□□□□ -0.9
SS18L1-204ENST00000491916 TMEM170BQ5T4T1 132 aa9.44□□□□□ -0.9
SS18L1-204ENST00000491916 TMEM223A0PJW6 202 aa9.43□□□□□ -0.9
SS18L1-204ENST00000491916 FABP4P15090 132 aa9.43□□□□□ -0.9
SS18L1-204ENST00000491916 S100A1P23297 94 aa9.43□□□□□ -0.9
SS18L1-204ENST00000491916 COA6Q5JTJ3 125 aaKnown RBP9.42□□□□□ -0.9
SS18L1-204ENST00000491916 PHF5AQ7RTV0 110 aaKnown RBP9.42□□□□□ -0.9
SS18L1-204ENST00000491916 KRTAP11-1Q8IUC1 163 aa9.42□□□□□ -0.9
SS18L1-204ENST00000491916 C7orf33Q8WU49 177 aa9.42□□□□□ -0.9
SS18L1-204ENST00000491916 PRR3P79522 188 aaKnown RBP9.41□□□□□ -0.9
SS18L1-204ENST00000491916 ZNF625Q96I27 306 aaPredicted RBP9.41□□□□□ -0.9
SS18L1-204ENST00000491916 HSPB8Q9UJY1 196 aa9.41□□□□□ -0.9
SS18L1-204ENST00000491916 TNXBP22105 4242 aa9.4□□□□□ -0.9
SS18L1-204ENST00000491916 H0Y8G0 127 aa9.39□□□□□ -0.91
SS18L1-204ENST00000491916 SERTAD4-AS1Q5TG53 156 aa9.39□□□□□ -0.91
SS18L1-204ENST00000491916 FAM19A5Q7Z5A7 132 aaPredicted RBP9.39□□□□□ -0.91
SS18L1-204ENST00000491916 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
SS18L1-204ENST00000491916 DMBT1Q9UGM3 2413 aaPredicted RBP9.39□□□□□ -0.91
SS18L1-204ENST00000491916 PMCHL2Q9BQD1 86 aa9.38□□□□□ -0.91
SS18L1-204ENST00000491916 PSORS1C2Q9UIG4 136 aa9.36□□□□□ -0.91
SS18L1-204ENST00000491916 KRTAP29-1A8MX34 341 aaPredicted RBP9.35□□□□□ -0.91
SS18L1-204ENST00000491916 SRSF9Q13242 221 aaKnown RBP eCLIP9.35□□□□□ -0.91
SS18L1-204ENST00000491916 SYS1-DBNDD2H3BUS1 97 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 M0QXV9 152 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 PLNP26678 52 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 TSPEAR-AS2P59090 65 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 MAP1LC3CQ9BXW4 147 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 ERG28Q9UKR5 140 aa9.34□□□□□ -0.91
SS18L1-204ENST00000491916 DPM2O94777 84 aa9.33□□□□□ -0.92
SS18L1-204ENST00000491916 PFN2P35080 140 aa9.33□□□□□ -0.92
SS18L1-204ENST00000491916 PLA2G2DQ9UNK4 145 aa9.33□□□□□ -0.92
SS18L1-204ENST00000491916 C22orf24Q9Y442 160 aa9.33□□□□□ -0.92
SS18L1-204ENST00000491916 IGKCP01834 107 aa9.32□□□□□ -0.92
SS18L1-204ENST00000491916 COX17Q14061 63 aa9.32□□□□□ -0.92
SS18L1-204ENST00000491916 Q8NDZ9 215 aa9.32□□□□□ -0.92
SS18L1-204ENST00000491916 IGLV5-37A0A075B6J1 123 aa9.31□□□□□ -0.92
SS18L1-204ENST00000491916 LINC01545Q5VT33 79 aa9.31□□□□□ -0.92
SS18L1-204ENST00000491916 SFTA2Q6UW10 78 aa9.31□□□□□ -0.92
SS18L1-204ENST00000491916 SND1-IT1Q9HBX3 110 aa9.31□□□□□ -0.92
SS18L1-204ENST00000491916 LEPROTO15243 131 aa9.3□□□□□ -0.92
SS18L1-204ENST00000491916 C3orf79P0CE67 100 aa9.3□□□□□ -0.92
SS18L1-204ENST00000491916 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
SS18L1-204ENST00000491916 OXTP01178 125 aa9.29□□□□□ -0.92
SS18L1-204ENST00000491916 PET117Q6UWS5 81 aa9.29□□□□□ -0.92
SS18L1-204ENST00000491916 NDUFA12Q9UI09 145 aa9.29□□□□□ -0.92
SS18L1-204ENST00000491916 VPREB1P12018 145 aa9.28□□□□□ -0.92
SS18L1-204ENST00000491916 C1orf137Q5JT78 98 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms