RNA–Protein interactions for RNA: ENST00000491052.5

LIMK1-207, Transcript of LIM domain kinase 1, humanhuman

TSL 4

Gene LIMK1, Length 587 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-207ENST00000491052 Q8IZM0 81 aa8.16□□□□□ -1.1
LIMK1-207ENST00000491052 C6orf48Q9UBA6 75 aa8.16□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BKO60814 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BJP06899 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BOP23527 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BBP33778 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BDP58876 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BCP62807 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST2H2BEQ16778 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.15□□□□□ -1.1
LIMK1-207ENST00000491052 STPG4Q8N801 248 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BHQ93079 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BNQ99877 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 HIST1H2BMQ99879 126 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 LINC00474Q9P2X8 69 aa8.15□□□□□ -1.1
LIMK1-207ENST00000491052 CHTOPQ9Y3Y2 248 aaKnown RBP8.15□□□□□ -1.1
LIMK1-207ENST00000491052 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 C11orf86A6NJI1 115 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 H0Y8G0 127 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 NUPR1O60356 82 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 ZNF22P17026 224 aaPredicted RBP8.14□□□□□ -1.11
LIMK1-207ENST00000491052 COX7B2Q8TF08 81 aa8.14□□□□□ -1.11
LIMK1-207ENST00000491052 TRAV12-1A0A0B4J245 112 aa8.13□□□□□ -1.11
LIMK1-207ENST00000491052 PLA2G1BP04054 148 aaKnown RBP8.13□□□□□ -1.11
LIMK1-207ENST00000491052 FABP4P15090 132 aa8.13□□□□□ -1.11
LIMK1-207ENST00000491052 TMEM170BQ5T4T1 132 aa8.13□□□□□ -1.11
LIMK1-207ENST00000491052 PLAC8Q9NZF1 115 aa8.13□□□□□ -1.11
LIMK1-207ENST00000491052 CXCL5P42830 114 aa8.12□□□□□ -1.11
LIMK1-207ENST00000491052 HSPB8Q9UJY1 196 aa8.12□□□□□ -1.11
LIMK1-207ENST00000491052 F8VRH5 84 aa8.11□□□□□ -1.11
LIMK1-207ENST00000491052 C9orf116Q5BN46 136 aaPredicted RBP8.11□□□□□ -1.11
LIMK1-207ENST00000491052 FAT1Q14517 4588 aa8.1□□□□□ -1.11
LIMK1-207ENST00000491052 TLX1NBP0CAT3 122 aa8.1□□□□□ -1.11
LIMK1-207ENST00000491052 RPL37AP61513 92 aaKnown RBP8.1□□□□□ -1.11
LIMK1-207ENST00000491052 GAGE2EQ4V326 116 aa8.1□□□□□ -1.11
LIMK1-207ENST00000491052 Q6ZRP5 223 aa8.1□□□□□ -1.11
LIMK1-207ENST00000491052 GAGE2DQ9UEU5 116 aa8.1□□□□□ -1.11
LIMK1-207ENST00000491052 FLG2Q5D862 2391 aaPredicted RBP8.09□□□□□ -1.11
LIMK1-207ENST00000491052 IGLV5-39A0A0G2JS06 123 aa8.09□□□□□ -1.11
LIMK1-207ENST00000491052 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
LIMK1-207ENST00000491052 INAFM2P0DMQ5 153 aa8.09□□□□□ -1.11
LIMK1-207ENST00000491052 ODF1Q14990 250 aa8.09□□□□□ -1.11
LIMK1-207ENST00000491052 C7orf33Q8WU49 177 aa8.09□□□□□ -1.11
LIMK1-207ENST00000491052 SRRM2Q9UQ35 2752 aaKnown RBP8.07□□□□□ -1.12
LIMK1-207ENST00000491052 A0A1W2PNN7 141 aa8.07□□□□□ -1.12
LIMK1-207ENST00000491052 MAP1LC3CQ9BXW4 147 aa8.07□□□□□ -1.12
LIMK1-207ENST00000491052 TMEM223A0PJW6 202 aa8.06□□□□□ -1.12
LIMK1-207ENST00000491052 FAM168BA1KXE4 195 aa8.05□□□□□ -1.12
LIMK1-207ENST00000491052 FAM19A5Q7Z5A7 132 aaPredicted RBP8.05□□□□□ -1.12
LIMK1-207ENST00000491052 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
LIMK1-207ENST00000491052 DPM2O94777 84 aa8.04□□□□□ -1.12
LIMK1-207ENST00000491052 PLNP26678 52 aa8.04□□□□□ -1.12
LIMK1-207ENST00000491052 KRTAP10-4P60372 401 aaPredicted RBP8.04□□□□□ -1.12
LIMK1-207ENST00000491052 COA6Q5JTJ3 125 aaKnown RBP8.04□□□□□ -1.12
LIMK1-207ENST00000491052 XAGE1AQ9HD64 81 aa8.04□□□□□ -1.12
LIMK1-207ENST00000491052 C9orf129Q5T035 196 aaKnown RBP8.03□□□□□ -1.12
LIMK1-207ENST00000491052 SYS1-DBNDD2H3BUS1 97 aa8.02□□□□□ -1.13
LIMK1-207ENST00000491052 IGKCP01834 107 aa8.02□□□□□ -1.13
LIMK1-207ENST00000491052 PFN2P35080 140 aa8.02□□□□□ -1.13
LIMK1-207ENST00000491052 SFTA2Q6UW10 78 aa8.02□□□□□ -1.13
LIMK1-207ENST00000491052 PHF5AQ7RTV0 110 aaKnown RBP8.02□□□□□ -1.13
LIMK1-207ENST00000491052 ZNF625Q96I27 306 aaPredicted RBP8.02□□□□□ -1.13
LIMK1-207ENST00000491052 VPS13BQ7Z7G8 4022 aa8.02□□□□□ -1.13
LIMK1-207ENST00000491052 M0QXV9 152 aa8.01□□□□□ -1.13
LIMK1-207ENST00000491052 ERG28Q9UKR5 140 aa8.01□□□□□ -1.13
LIMK1-207ENST00000491052 ABCA13Q86UQ4 5058 aa8.01□□□□□ -1.13
LIMK1-207ENST00000491052 HERVK_113P61574 105 aa8□□□□□ -1.13
LIMK1-207ENST00000491052 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
LIMK1-207ENST00000491052 KRTDAPP60985 99 aa7.99□□□□□ -1.13
LIMK1-207ENST00000491052 HNRNPA3P51991 378 aaKnown RBP7.98□□□□□ -1.13
LIMK1-207ENST00000491052 SERTAD4-AS1Q5TG53 156 aa7.98□□□□□ -1.13
LIMK1-207ENST00000491052 PET117Q6UWS5 81 aa7.98□□□□□ -1.13
LIMK1-207ENST00000491052 KRTAP7-1Q8IUC3 87 aa7.98□□□□□ -1.13
LIMK1-207ENST00000491052 PLEKHB2Q96CS7 222 aa7.98□□□□□ -1.13
LIMK1-207ENST00000491052 PCLOQ9Y6V0 5065 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 LEPROTO15243 131 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 C3orf79P0CE67 100 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 UBE2BP63146 152 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 COX17Q14061 63 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 LINC01545Q5VT33 79 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 NDUFA12Q9UI09 145 aa7.97□□□□□ -1.13
LIMK1-207ENST00000491052 A0A0U1RRA0 63 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 LINC00158P58513 81 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 TSPEAR-AS2P59090 65 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 MEIG1Q5JSS6 88 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 SND1-IT1Q9HBX3 110 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 PSORS1C2Q9UIG4 136 aa7.96□□□□□ -1.14
LIMK1-207ENST00000491052 TMA7Q9Y2S6 64 aaKnown RBP7.96□□□□□ -1.14
LIMK1-207ENST00000491052 MYMXA0A1B0GTQ4 84 aa7.95□□□□□ -1.14
LIMK1-207ENST00000491052 J3QQQ9 107 aa7.95□□□□□ -1.14
LIMK1-207ENST00000491052 S100A6P06703 90 aa7.95□□□□□ -1.14
LIMK1-207ENST00000491052 LGALS3P17931 250 aaKnown RBP7.95□□□□□ -1.14
LIMK1-207ENST00000491052 HERV-K104P63124 156 aa7.95□□□□□ -1.14
LIMK1-207ENST00000491052 DMBT1Q9UGM3 2413 aaPredicted RBP7.94□□□□□ -1.14
LIMK1-207ENST00000491052 C20orf202A1L168 122 aa7.94□□□□□ -1.14
LIMK1-207ENST00000491052 S100A2P29034 98 aa7.94□□□□□ -1.14
LIMK1-207ENST00000491052 C22orf24Q9Y442 160 aa7.94□□□□□ -1.14
LIMK1-207ENST00000491052 SMIM13P0DJ93 91 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms