RNA–Protein interactions for RNA: ENST00000490980.1

FRAT1-202, Transcript of FRAT1, WNT signaling pathway regulator, humanhuman

TSL 2

Gene FRAT1, Length 633 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FRAT1-202ENST00000490980 C6orf226Q5I0X4 101 aa8.9□□□□□ -0.98
FRAT1-202ENST00000490980 C2orf82Q6UX34 121 aa8.9□□□□□ -0.98
FRAT1-202ENST00000490980 H3BRM9 83 aa8.89□□□□□ -0.99
FRAT1-202ENST00000490980 TLX1NBP0CAT3 122 aa8.89□□□□□ -0.99
FRAT1-202ENST00000490980 RPL37AP61513 92 aaKnown RBP8.89□□□□□ -0.99
FRAT1-202ENST00000490980 SERF1AO75920 110 aa8.88□□□□□ -0.99
FRAT1-202ENST00000490980 CXCL5P42830 114 aa8.88□□□□□ -0.99
FRAT1-202ENST00000490980 KRTAP10-4P60372 401 aaPredicted RBP8.88□□□□□ -0.99
FRAT1-202ENST00000490980 FAM19A2Q8N3H0 131 aa8.88□□□□□ -0.99
FRAT1-202ENST00000490980 IFI27L1Q96BM0 104 aa8.88□□□□□ -0.99
FRAT1-202ENST00000490980 ABCA13Q86UQ4 5058 aa8.88□□□□□ -0.99
FRAT1-202ENST00000490980 SPINK8P0C7L1 97 aa8.87□□□□□ -0.99
FRAT1-202ENST00000490980 LINC00310P59036 64 aa8.87□□□□□ -0.99
FRAT1-202ENST00000490980 COX7B2Q8TF08 81 aa8.87□□□□□ -0.99
FRAT1-202ENST00000490980 TRAV12-1A0A0B4J245 112 aa8.86□□□□□ -0.99
FRAT1-202ENST00000490980 F8VRH5 84 aa8.86□□□□□ -0.99
FRAT1-202ENST00000490980 ZNF22P17026 224 aaPredicted RBP8.86□□□□□ -0.99
FRAT1-202ENST00000490980 Q6ZRP5 223 aa8.86□□□□□ -0.99
FRAT1-202ENST00000490980 C7orf33Q8WU49 177 aa8.86□□□□□ -0.99
FRAT1-202ENST00000490980 CHTOPQ9Y3Y2 248 aaKnown RBP8.86□□□□□ -0.99
FRAT1-202ENST00000490980 C11orf86A6NJI1 115 aa8.85□□□□□ -0.99
FRAT1-202ENST00000490980 NDUFC2-KCTD14E9PQ53 114 aa8.85□□□□□ -0.99
FRAT1-202ENST00000490980 A0A1W2PNN7 141 aa8.83□□□□□ -1
FRAT1-202ENST00000490980 LEPROTL1O95214 131 aa8.83□□□□□ -1
FRAT1-202ENST00000490980 GAGE2EQ4V326 116 aa8.83□□□□□ -1
FRAT1-202ENST00000490980 C9orf116Q5BN46 136 aaPredicted RBP8.83□□□□□ -1
FRAT1-202ENST00000490980 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
FRAT1-202ENST00000490980 IGLV5-39A0A0G2JS06 123 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 NUPR1O60356 82 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BKO60814 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BJP06899 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BOP23527 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BBP33778 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BDP58876 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BCP62807 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST2H2BEQ16778 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.82□□□□□ -1
FRAT1-202ENST00000490980 TMEM170BQ5T4T1 132 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BHQ93079 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BNQ99877 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 HIST1H2BMQ99879 126 aa8.82□□□□□ -1
FRAT1-202ENST00000490980 S100A1P23297 94 aa8.8□□□□□ -1
FRAT1-202ENST00000490980 HSPB8Q9UJY1 196 aa8.8□□□□□ -1
FRAT1-202ENST00000490980 FAT1Q14517 4588 aa8.8□□□□□ -1
FRAT1-202ENST00000490980 FABP4P15090 132 aa8.79□□□□□ -1
FRAT1-202ENST00000490980 SRRM2Q9UQ35 2752 aaKnown RBP8.78□□□□□ -1
FRAT1-202ENST00000490980 FAM168BA1KXE4 195 aa8.78□□□□□ -1
FRAT1-202ENST00000490980 H0Y8G0 127 aa8.78□□□□□ -1
FRAT1-202ENST00000490980 PRR3P79522 188 aaKnown RBP8.78□□□□□ -1
FRAT1-202ENST00000490980 ODF1Q14990 250 aa8.78□□□□□ -1
FRAT1-202ENST00000490980 C9orf129Q5T035 196 aaKnown RBP8.78□□□□□ -1
FRAT1-202ENST00000490980 FAM19A5Q7Z5A7 132 aaPredicted RBP8.78□□□□□ -1
FRAT1-202ENST00000490980 TMEM223A0PJW6 202 aa8.77□□□□□ -1.01
FRAT1-202ENST00000490980 HNRNPA3P51991 378 aaKnown RBP8.77□□□□□ -1.01
FRAT1-202ENST00000490980 PHF5AQ7RTV0 110 aaKnown RBP8.77□□□□□ -1.01
FRAT1-202ENST00000490980 VPS13BQ7Z7G8 4022 aa8.77□□□□□ -1.01
FRAT1-202ENST00000490980 ATP6V1G1O75348 118 aa8.76□□□□□ -1.01
FRAT1-202ENST00000490980 SFTA2Q6UW10 78 aa8.76□□□□□ -1.01
FRAT1-202ENST00000490980 KRTAP7-1Q8IUC3 87 aa8.75□□□□□ -1.01
FRAT1-202ENST00000490980 XAGE1AQ9HD64 81 aa8.75□□□□□ -1.01
FRAT1-202ENST00000490980 M0QXV9 152 aa8.74□□□□□ -1.01
FRAT1-202ENST00000490980 PLNP26678 52 aa8.74□□□□□ -1.01
FRAT1-202ENST00000490980 MAP1LC3CQ9BXW4 147 aa8.74□□□□□ -1.01
FRAT1-202ENST00000490980 COA6Q5JTJ3 125 aaKnown RBP8.73□□□□□ -1.01
FRAT1-202ENST00000490980 ZNF625Q96I27 306 aaPredicted RBP8.73□□□□□ -1.01
FRAT1-202ENST00000490980 ERG28Q9UKR5 140 aa8.73□□□□□ -1.01
FRAT1-202ENST00000490980 KRTAP29-1A8MX34 341 aaPredicted RBP8.72□□□□□ -1.01
FRAT1-202ENST00000490980 DPM2O94777 84 aa8.72□□□□□ -1.01
FRAT1-202ENST00000490980 PFN2P35080 140 aa8.72□□□□□ -1.01
FRAT1-202ENST00000490980 COX17Q14061 63 aa8.72□□□□□ -1.01
FRAT1-202ENST00000490980 SERTAD4-AS1Q5TG53 156 aa8.72□□□□□ -1.01
FRAT1-202ENST00000490980 PSORS1C2Q9UIG4 136 aa8.72□□□□□ -1.01
FRAT1-202ENST00000490980 FLG2Q5D862 2391 aaPredicted RBP8.71□□□□□ -1.01
FRAT1-202ENST00000490980 PMCHL2Q9BQD1 86 aa8.71□□□□□ -1.02
FRAT1-202ENST00000490980 OXTP01178 125 aa8.7□□□□□ -1.02
FRAT1-202ENST00000490980 IGKCP01834 107 aa8.7□□□□□ -1.02
FRAT1-202ENST00000490980 UBE2BP63146 152 aa8.7□□□□□ -1.02
FRAT1-202ENST00000490980 PLA2G2DQ9UNK4 145 aa8.7□□□□□ -1.02
FRAT1-202ENST00000490980 SYS1-DBNDD2H3BUS1 97 aa8.69□□□□□ -1.02
FRAT1-202ENST00000490980 C22orf24Q9Y442 160 aa8.69□□□□□ -1.02
FRAT1-202ENST00000490980 J3QL48 77 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 HERVK_113P61574 105 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 HERV-K104P63124 156 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 LBHQ53QV2 105 aaPredicted RBP8.68□□□□□ -1.02
FRAT1-202ENST00000490980 C1orf137Q5JT78 98 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 SPINK6Q6UWN8 80 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 KRTAP11-1Q8IUC1 163 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 TP73-AS1Q9UF72 201 aa8.68□□□□□ -1.02
FRAT1-202ENST00000490980 IGLV5-37A0A075B6J1 123 aa8.67□□□□□ -1.02
FRAT1-202ENST00000490980 LEPROTO15243 131 aa8.67□□□□□ -1.02
FRAT1-202ENST00000490980 PLEKHB2Q96CS7 222 aa8.67□□□□□ -1.02
FRAT1-202ENST00000490980 SND1-IT1Q9HBX3 110 aa8.67□□□□□ -1.02
FRAT1-202ENST00000490980 MYMXA0A1B0GTQ4 84 aa8.66□□□□□ -1.02
FRAT1-202ENST00000490980 LINC00158P58513 81 aa8.66□□□□□ -1.02
FRAT1-202ENST00000490980 SRSF9Q13242 221 aaKnown RBP eCLIP8.66□□□□□ -1.02
FRAT1-202ENST00000490980 PET117Q6UWS5 81 aa8.66□□□□□ -1.02
FRAT1-202ENST00000490980 MRPL55Q7Z7F7 128 aaKnown RBP8.66□□□□□ -1.02
FRAT1-202ENST00000490980 NDUFA12Q9UI09 145 aa8.66□□□□□ -1.02
FRAT1-202ENST00000490980 TSPEAR-AS2P59090 65 aa8.65□□□□□ -1.02
FRAT1-202ENST00000490980 LINC01545Q5VT33 79 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 84.8 ms