RNA–Protein interactions for RNA: ENST00000490663.1

C4A-256, Transcript of complement C4A (Rodgers blood group), human

TSL 2

Gene C4A, Length 524 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
C4A-256	ENST00000490663	SERF1A	O75920	110 aa		11.71	□□□□□ -0.53
C4A-256	ENST00000490663	PLA2G1B	P04054	148 aa	Known RBP	11.71	□□□□□ -0.53
C4A-256	ENST00000490663	PRSS2	P07478	247 aa		11.71	□□□□□ -0.53
C4A-256	ENST00000490663	IGLV5-45	A0A087WSX0	123 aa		11.7	□□□□□ -0.54
C4A-256	ENST00000490663	NUPR1	O60356	82 aa		11.7	□□□□□ -0.54
C4A-256	ENST00000490663	ATP5L	O75964	103 aa		11.7	□□□□□ -0.54
C4A-256	ENST00000490663	RPL37A	P61513	92 aa	Known RBP	11.7	□□□□□ -0.54
C4A-256	ENST00000490663	IGLC3	P0DOY3	106 aa		11.69	□□□□□ -0.54
C4A-256	ENST00000490663	RNF151	Q2KHN1	245 aa		11.68	□□□□□ -0.54
C4A-256	ENST00000490663	C6orf226	Q5I0X4	101 aa		11.68	□□□□□ -0.54
C4A-256	ENST00000490663		Q8IZM0	81 aa		11.68	□□□□□ -0.54
C4A-256	ENST00000490663	PKIG	Q9Y2B9	76 aa		11.68	□□□□□ -0.54
C4A-256	ENST00000490663		A0A1W2PNN7	141 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663	C11orf86	A6NJI1	115 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663		F8WDY8	70 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663	ZNF22	P17026	224 aa	Predicted RBP	11.67	□□□□□ -0.54
C4A-256	ENST00000490663	CKS1B	P61024	79 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663	GAGE2E	Q4V326	116 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663		Q6ZRP5	223 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663	IFI27L1	Q96BM0	104 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663	GAGE2D	Q9UEU5	116 aa		11.67	□□□□□ -0.54
C4A-256	ENST00000490663		H0Y8G0	127 aa		11.66	□□□□□ -0.54
C4A-256	ENST00000490663	HNRNPA3	P51991	378 aa	Known RBP	11.66	□□□□□ -0.54
C4A-256	ENST00000490663	COX7B2	Q8TF08	81 aa		11.66	□□□□□ -0.54
C4A-256	ENST00000490663	FAM168B	A1KXE4	195 aa		11.65	□□□□□ -0.54
C4A-256	ENST00000490663	LINC00474	Q9P2X8	69 aa		11.65	□□□□□ -0.54
C4A-256	ENST00000490663	CHTOP	Q9Y3Y2	248 aa	Known RBP	11.65	□□□□□ -0.54
C4A-256	ENST00000490663	TRBV30	A0A0K0K1B3	111 aa		11.64	□□□□□ -0.55
C4A-256	ENST00000490663		H3BRM9	83 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BK	O60814	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BJ	P06899	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	TLX1NB	P0CAT3	122 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	FABP4	P15090	132 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BO	P23527	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BB	P33778	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BD	P58876	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BC	P62807	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST2H2BE	Q16778	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST2H2BF	Q5QNW6	126 aa	Predicted RBP	11.62	□□□□□ -0.55
C4A-256	ENST00000490663	TMEM170B	Q5T4T1	132 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BH	Q93079	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BN	Q99877	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	HIST1H2BM	Q99879	126 aa		11.62	□□□□□ -0.55
C4A-256	ENST00000490663	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	11.61	□□□□□ -0.55
C4A-256	ENST00000490663	C7orf33	Q8WU49	177 aa		11.61	□□□□□ -0.55
C4A-256	ENST00000490663	MYCBP2	O75592	4640 aa		11.61	□□□□□ -0.55
C4A-256	ENST00000490663		F8VRH5	84 aa		11.6	□□□□□ -0.55
C4A-256	ENST00000490663	ATP6V1G1	O75348	118 aa		11.6	□□□□□ -0.55
C4A-256	ENST00000490663	LEPROTL1	O95214	131 aa		11.6	□□□□□ -0.55
C4A-256	ENST00000490663	PHF5A	Q7RTV0	110 aa	Known RBP	11.6	□□□□□ -0.55
C4A-256	ENST00000490663	TRAV12-1	A0A0B4J245	112 aa		11.59	□□□□□ -0.55
C4A-256	ENST00000490663	NDUFC2-KCTD14	E9PQ53	114 aa		11.59	□□□□□ -0.55
C4A-256	ENST00000490663	C9orf129	Q5T035	196 aa	Known RBP	11.59	□□□□□ -0.55
C4A-256	ENST00000490663	IGLV5-39	A0A0G2JS06	123 aa		11.58	□□□□□ -0.56
C4A-256	ENST00000490663	KRTAP7-1	Q8IUC3	87 aa		11.58	□□□□□ -0.56
C4A-256	ENST00000490663	XAGE1A	Q9HD64	81 aa		11.58	□□□□□ -0.56
C4A-256	ENST00000490663	CXCL5	P42830	114 aa		11.57	□□□□□ -0.56
C4A-256	ENST00000490663	ODF1	Q14990	250 aa		11.56	□□□□□ -0.56
C4A-256	ENST00000490663	PMCHL2	Q9BQD1	86 aa		11.56	□□□□□ -0.56
C4A-256	ENST00000490663	PRR3	P79522	188 aa	Known RBP	11.55	□□□□□ -0.56
C4A-256	ENST00000490663	ZNF625	Q96I27	306 aa	Predicted RBP	11.55	□□□□□ -0.56
C4A-256	ENST00000490663	TMEM223	A0PJW6	202 aa		11.54	□□□□□ -0.56
C4A-256	ENST00000490663	DMBT1	Q9UGM3	2413 aa	Predicted RBP	11.53	□□□□□ -0.56
C4A-256	ENST00000490663	SERTAD4-AS1	Q5TG53	156 aa		11.53	□□□□□ -0.56
C4A-256	ENST00000490663	KRTAP11-1	Q8IUC1	163 aa		11.53	□□□□□ -0.56
C4A-256	ENST00000490663	HSPB8	Q9UJY1	196 aa		11.52	□□□□□ -0.57
C4A-256	ENST00000490663	LRP1	Q07954	4544 aa	Known RBP	11.51	□□□□□ -0.57
C4A-256	ENST00000490663		M0QXV9	152 aa		11.51	□□□□□ -0.57
C4A-256	ENST00000490663	PFN2	P35080	140 aa		11.51	□□□□□ -0.57
C4A-256	ENST00000490663	S100A1	P23297	94 aa		11.5	□□□□□ -0.57
C4A-256	ENST00000490663	FAT3	Q8TDW7	4589 aa		11.49	□□□□□ -0.57
C4A-256	ENST00000490663	PSORS1C2	Q9UIG4	136 aa		11.49	□□□□□ -0.57
C4A-256	ENST00000490663	ERG28	Q9UKR5	140 aa		11.47	□□□□□ -0.57
C4A-256	ENST00000490663		A0A0U1RRA0	63 aa		11.46	□□□□□ -0.57
C4A-256	ENST00000490663	TSPEAR-AS2	P59090	65 aa		11.46	□□□□□ -0.57
C4A-256	ENST00000490663	MAP1LC3C	Q9BXW4	147 aa		11.46	□□□□□ -0.57
C4A-256	ENST00000490663	DPM2	O94777	84 aa		11.45	□□□□□ -0.58
C4A-256	ENST00000490663	UBE2B	P63146	152 aa		11.45	□□□□□ -0.58
C4A-256	ENST00000490663	C1orf137	Q5JT78	98 aa		11.44	□□□□□ -0.58
C4A-256	ENST00000490663	C22orf24	Q9Y442	160 aa		11.44	□□□□□ -0.58
C4A-256	ENST00000490663		J3QL48	77 aa		11.43	□□□□□ -0.58
C4A-256	ENST00000490663	IGKC	P01834	107 aa		11.43	□□□□□ -0.58
C4A-256	ENST00000490663	SYS1-DBNDD2	H3BUS1	97 aa		11.42	□□□□□ -0.58
C4A-256	ENST00000490663	PLN	P26678	52 aa		11.42	□□□□□ -0.58
C4A-256	ENST00000490663	KRTAP29-1	A8MX34	341 aa	Predicted RBP	11.41	□□□□□ -0.58
C4A-256	ENST00000490663	COA6	Q5JTJ3	125 aa	Known RBP	11.41	□□□□□ -0.58
C4A-256	ENST00000490663	SND1-IT1	Q9HBX3	110 aa		11.41	□□□□□ -0.58
C4A-256	ENST00000490663	GAGE10	A6NGK3	116 aa		11.4	□□□□□ -0.58
C4A-256	ENST00000490663	LEPROT	O15243	131 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663	C3orf79	P0CE67	100 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663	SMIM13	P0DJ93	91 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663	LINC00158	P58513	81 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663		Q8NDZ9	215 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663	NDUFA12	Q9UI09	145 aa		11.39	□□□□□ -0.59
C4A-256	ENST00000490663	KRTDAP	P60985	99 aa		11.38	□□□□□ -0.59
C4A-256	ENST00000490663	MEIG1	Q5JSS6	88 aa		11.38	□□□□□ -0.59
C4A-256	ENST00000490663	MRPL55	Q7Z7F7	128 aa	Known RBP	11.38	□□□□□ -0.59
C4A-256	ENST00000490663	RPL37AP8	A6NKH3	93 aa		11.37	□□□□□ -0.59
C4A-256	ENST00000490663		J3QQQ9	107 aa		11.36	□□□□□ -0.59
C4A-256	ENST00000490663	HERVK_113	P61574	105 aa		11.36	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms