RNA–Protein interactions for RNA: ENST00000490561.6

SNX12-205, Transcript of sorting nexin 12, humanhuman

TSL 1 (best)

Gene SNX12, Length 862 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX12-205ENST00000490561 SPATA45Q537H7 98 aa8.68□□□□□ -1.02
SNX12-205ENST00000490561 NDUFA12Q9UI09 145 aa8.68□□□□□ -1.02
SNX12-205ENST00000490561 PKIGQ9Y2B9 76 aa8.68□□□□□ -1.02
SNX12-205ENST00000490561 TRBV30A0A0K0K1B3 111 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 LINC00587B1AMM8 73 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 TNP2Q05952 138 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 SYCNQ0VAF6 134 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 RNF151Q2KHN1 245 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 MAJINQ3KP22 176 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 CARD19Q96LW7 228 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 PAM16Q9Y3D7 125 aa8.67□□□□□ -1.02
SNX12-205ENST00000490561 TSPEAR-AS2P59090 65 aa8.66□□□□□ -1.02
SNX12-205ENST00000490561 ZNF625Q96I27 306 aaPredicted RBP8.66□□□□□ -1.02
SNX12-205ENST00000490561 IGKV2D-26A0A0A0MRZ7 120 aa8.65□□□□□ -1.02
SNX12-205ENST00000490561 ZNF815PA8K554 130 aa8.64□□□□□ -1.03
SNX12-205ENST00000490561 CDPF1Q6NVV7 123 aa8.64□□□□□ -1.03
SNX12-205ENST00000490561 LINC00526Q96FQ7 95 aa8.64□□□□□ -1.03
SNX12-205ENST00000490561 RYR3Q15413 4870 aa8.64□□□□□ -1.03
SNX12-205ENST00000490561 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.63□□□□□ -1.03
SNX12-205ENST00000490561 DLEU1O43261 78 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 COX8AP10176 69 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 COX17Q14061 63 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 C2orf82Q6UX34 121 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 UNQ6190/PRO20217Q6UXQ8 127 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 Q6ZRU5 148 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 PGPEP1Q9NXJ5 209 aa8.63□□□□□ -1.03
SNX12-205ENST00000490561 CIRBPQ14011 172 aaKnown RBP8.62□□□□□ -1.03
SNX12-205ENST00000490561 C12orf57Q99622 126 aa8.62□□□□□ -1.03
SNX12-205ENST00000490561 IGLV5-52A0A0A0MRZ9 124 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 SLPIP03973 132 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 MEIG1Q5JSS6 88 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 C10orf25Q5T742 122 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 SLC25A34Q6PIV7 304 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 SCGB1D4Q6XE38 83 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 PCP2Q8IVA1 136 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 BOD1L2Q8IYS8 172 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 C9orf163Q8N9P6 203 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 C6orf48Q9UBA6 75 aa8.61□□□□□ -1.03
SNX12-205ENST00000490561 FAT2Q9NYQ8 4349 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 A0A0J9YXY3 114 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 TIMM17BO60830 172 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 TLX1NBP0CAT3 122 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 GCSHP23434 173 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 ERG28Q9UKR5 140 aa8.6□□□□□ -1.03
SNX12-205ENST00000490561 LOC107984640A0A0U1RRK4 108 aa8.59□□□□□ -1.03
SNX12-205ENST00000490561 LINC00518Q8N0U6 118 aa8.59□□□□□ -1.03
SNX12-205ENST00000490561 TTTY13Q9BZ97 58 aa8.59□□□□□ -1.03
SNX12-205ENST00000490561 TMEM238C9JI98 176 aa8.58□□□□□ -1.04
SNX12-205ENST00000490561 NDUFC2-KCTD14E9PQ53 114 aa8.58□□□□□ -1.04
SNX12-205ENST00000490561 C14orf144Q96I85 54 aa8.58□□□□□ -1.04
SNX12-205ENST00000490561 LINC00158P58513 81 aa8.57□□□□□ -1.04
SNX12-205ENST00000490561 UQCR10Q9UDW1 63 aa8.57□□□□□ -1.04
SNX12-205ENST00000490561 HECTD4Q9Y4D8 3996 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 TSTD3H0UI37 97 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 PFN2P35080 140 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 C9orf116Q5BN46 136 aaPredicted RBP8.56□□□□□ -1.04
SNX12-205ENST00000490561 Q6ZVH6 145 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 COPS9Q8WXC6 57 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 DNAH11Q96DT5 4516 aa8.56□□□□□ -1.04
SNX12-205ENST00000490561 A0A1B0GVY2 172 aa8.55□□□□□ -1.04
SNX12-205ENST00000490561 SMIM13P0DJ93 91 aa8.55□□□□□ -1.04
SNX12-205ENST00000490561 RPL18AQ02543 176 aaKnown RBP8.55□□□□□ -1.04
SNX12-205ENST00000490561 HIGD1BQ9P298 99 aa8.55□□□□□ -1.04
SNX12-205ENST00000490561 LINC00474Q9P2X8 69 aa8.55□□□□□ -1.04
SNX12-205ENST00000490561 KRTAP10-2P60368 255 aa8.54□□□□□ -1.04
SNX12-205ENST00000490561 SPANXB1Q9NS25 103 aaPredicted RBP8.54□□□□□ -1.04
SNX12-205ENST00000490561 C16orf90A8MZG2 172 aa8.53□□□□□ -1.04
SNX12-205ENST00000490561 MIR7-3HGQ8N6C7 128 aa8.53□□□□□ -1.04
SNX12-205ENST00000490561 MIEN1Q9BRT3 115 aa8.53□□□□□ -1.04
SNX12-205ENST00000490561 SPANXDQ9BXN6 97 aa8.53□□□□□ -1.04
SNX12-205ENST00000490561 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
SNX12-205ENST00000490561 IFITM1P13164 125 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 PTTG1IPP53801 180 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 SDIM1Q6ZPB5 146 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 Q6ZRP5 223 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 LITAFQ99732 161 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 PPDPFQ9H3Y8 114 aa8.52□□□□□ -1.05
SNX12-205ENST00000490561 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
SNX12-205ENST00000490561 GAGE2BQ13066 116 aa8.51□□□□□ -1.05
SNX12-205ENST00000490561 SRSF9Q13242 221 aaKnown RBP eCLIP8.51□□□□□ -1.05
SNX12-205ENST00000490561 GAGE2EQ4V326 116 aa8.51□□□□□ -1.05
SNX12-205ENST00000490561 PRO1933Q9H354 126 aa8.51□□□□□ -1.05
SNX12-205ENST00000490561 GAGE2DQ9UEU5 116 aa8.51□□□□□ -1.05
SNX12-205ENST00000490561 LOC107984156A0A0G2JMH3 177 aa8.5□□□□□ -1.05
SNX12-205ENST00000490561 HNRNPA3P51991 378 aaKnown RBP8.5□□□□□ -1.05
SNX12-205ENST00000490561 ARL17AQ8IVW1 177 aa8.5□□□□□ -1.05
SNX12-205ENST00000490561 SND1-IT1Q9HBX3 110 aa8.5□□□□□ -1.05
SNX12-205ENST00000490561 DNAH5Q8TE73 4624 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 PKD1P98161 4303 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 A0A096LNI7 61 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 TAL2Q16559 108 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 ADAMTSL4-AS1Q5T5F5 129 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 C2orf91Q6ZV80 131 aa8.49□□□□□ -1.05
SNX12-205ENST00000490561 DAND5Q8N907 189 aa8.48□□□□□ -1.05
SNX12-205ENST00000490561 HIST1H4GQ99525 98 aa8.48□□□□□ -1.05
SNX12-205ENST00000490561 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
SNX12-205ENST00000490561 IGKV2-24A0A0C4DH68 120 aa8.47□□□□□ -1.05
SNX12-205ENST00000490561 FUSP35637 526 aaKnown RBP eCLIP8.47□□□□□ -1.05
SNX12-205ENST00000490561 RPL24P83731 157 aaKnown RBP8.47□□□□□ -1.05
SNX12-205ENST00000490561 LINC01620Q4KN68 170 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 100.1 ms