RNA–Protein interactions for RNA: ENST00000490346.1

ECM1-205, Transcript of extracellular matrix protein 1, humanhuman

TSL 3

Gene ECM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-205ENST00000490346 HIST1H2BOP23527 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BBP33778 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 PTTG1IPP53801 180 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BDP58876 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BCP62807 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 RPL18AQ02543 176 aaKnown RBP5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST2H2BEQ16778 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 RNF151Q2KHN1 245 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 C6orf226Q5I0X4 101 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST2H2BFQ5QNW6 126 aaPredicted RBP5.82□□□□□ -1.48
ECM1-205ENST00000490346 Q8IZM0 81 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 STPG4Q8N801 248 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BHQ93079 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BNQ99877 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 HIST1H2BMQ99879 126 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 LINC00474Q9P2X8 69 aa5.82□□□□□ -1.48
ECM1-205ENST00000490346 C11orf86A6NJI1 115 aa5.81□□□□□ -1.48
ECM1-205ENST00000490346 H3BRM9 83 aa5.81□□□□□ -1.48
ECM1-205ENST00000490346 LEPROTL1O95214 131 aa5.81□□□□□ -1.48
ECM1-205ENST00000490346 ZNF22P17026 224 aaPredicted RBP5.81□□□□□ -1.48
ECM1-205ENST00000490346 CKS1BP61024 79 aa5.81□□□□□ -1.48
ECM1-205ENST00000490346 PLAC8Q9NZF1 115 aa5.81□□□□□ -1.48
ECM1-205ENST00000490346 CHTOPQ9Y3Y2 248 aaKnown RBP5.81□□□□□ -1.48
ECM1-205ENST00000490346 TRAV12-1A0A0B4J245 112 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 TRBV30A0A0K0K1B3 111 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 H0Y8G0 127 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 TLX1NBP0CAT3 122 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 FABP4P15090 132 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 C9orf116Q5BN46 136 aaPredicted RBP5.8□□□□□ -1.48
ECM1-205ENST00000490346 TMEM170BQ5T4T1 132 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 COX7B2Q8TF08 81 aa5.8□□□□□ -1.48
ECM1-205ENST00000490346 F8VRH5 84 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 PLA2G1BP04054 148 aaKnown RBP5.79□□□□□ -1.48
ECM1-205ENST00000490346 CXCL5P42830 114 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 GAGE2EQ4V326 116 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 Q6ZRP5 223 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 GAGE2DQ9UEU5 116 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 HSPB8Q9UJY1 196 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 SRRM2Q9UQ35 2752 aaKnown RBP5.79□□□□□ -1.48
ECM1-205ENST00000490346 ABCA13Q86UQ4 5058 aa5.79□□□□□ -1.48
ECM1-205ENST00000490346 PCLOQ9Y6V0 5065 aa5.78□□□□□ -1.48
ECM1-205ENST00000490346 IGLV5-39A0A0G2JS06 123 aa5.78□□□□□ -1.48
ECM1-205ENST00000490346 A0A1W2PNN7 141 aa5.78□□□□□ -1.48
ECM1-205ENST00000490346 RPL37AP61513 92 aaKnown RBP5.78□□□□□ -1.48
ECM1-205ENST00000490346 NDUFC2-KCTD14E9PQ53 114 aa5.77□□□□□ -1.49
ECM1-205ENST00000490346 INAFM2P0DMQ5 153 aa5.77□□□□□ -1.49
ECM1-205ENST00000490346 ODF1Q14990 250 aa5.77□□□□□ -1.49
ECM1-205ENST00000490346 VPS13BQ7Z7G8 4022 aa5.77□□□□□ -1.49
ECM1-205ENST00000490346 TMEM223A0PJW6 202 aa5.76□□□□□ -1.49
ECM1-205ENST00000490346 KRTAP10-4P60372 401 aaPredicted RBP5.76□□□□□ -1.49
ECM1-205ENST00000490346 C7orf33Q8WU49 177 aa5.76□□□□□ -1.49
ECM1-205ENST00000490346 FAM168BA1KXE4 195 aa5.75□□□□□ -1.49
ECM1-205ENST00000490346 COA6Q5JTJ3 125 aaKnown RBP5.75□□□□□ -1.49
ECM1-205ENST00000490346 PMCHL2Q9BQD1 86 aa5.75□□□□□ -1.49
ECM1-205ENST00000490346 MAP1LC3CQ9BXW4 147 aa5.75□□□□□ -1.49
ECM1-205ENST00000490346 C9orf129Q5T035 196 aaKnown RBP5.74□□□□□ -1.49
ECM1-205ENST00000490346 FAM19A5Q7Z5A7 132 aaPredicted RBP5.74□□□□□ -1.49
ECM1-205ENST00000490346 XAGE1AQ9HD64 81 aa5.74□□□□□ -1.49
ECM1-205ENST00000490346 SYS1-DBNDD2H3BUS1 97 aa5.73□□□□□ -1.49
ECM1-205ENST00000490346 DPM2O94777 84 aa5.73□□□□□ -1.49
ECM1-205ENST00000490346 PLNP26678 52 aa5.73□□□□□ -1.49
ECM1-205ENST00000490346 PHF5AQ7RTV0 110 aaKnown RBP5.73□□□□□ -1.49
ECM1-205ENST00000490346 ZNF625Q96I27 306 aaPredicted RBP5.73□□□□□ -1.49
ECM1-205ENST00000490346 IGKCP01834 107 aa5.72□□□□□ -1.49
ECM1-205ENST00000490346 PFN2P35080 140 aa5.72□□□□□ -1.49
ECM1-205ENST00000490346 HNRNPA3P51991 378 aaKnown RBP5.72□□□□□ -1.49
ECM1-205ENST00000490346 KRTAP7-1Q8IUC3 87 aa5.72□□□□□ -1.49
ECM1-205ENST00000490346 FLG2Q5D862 2391 aaPredicted RBP5.72□□□□□ -1.49
ECM1-205ENST00000490346 M0QXV9 152 aa5.71□□□□□ -1.5
ECM1-205ENST00000490346 PRR3P79522 188 aaKnown RBP5.71□□□□□ -1.5
ECM1-205ENST00000490346 SERTAD4-AS1Q5TG53 156 aa5.71□□□□□ -1.5
ECM1-205ENST00000490346 ERG28Q9UKR5 140 aa5.71□□□□□ -1.5
ECM1-205ENST00000490346 C3orf79P0CE67 100 aa5.7□□□□□ -1.5
ECM1-205ENST00000490346 TSPEAR-AS2P59090 65 aa5.7□□□□□ -1.5
ECM1-205ENST00000490346 SFTA2Q6UW10 78 aa5.7□□□□□ -1.5
ECM1-205ENST00000490346 LEPROTO15243 131 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 KRTDAPP60985 99 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 HERVK_113P61574 105 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 COX17Q14061 63 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 LINC01545Q5VT33 79 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 PET117Q6UWS5 81 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 NDUFA12Q9UI09 145 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 PSORS1C2Q9UIG4 136 aa5.69□□□□□ -1.5
ECM1-205ENST00000490346 A0A0U1RRA0 63 aa5.68□□□□□ -1.5
ECM1-205ENST00000490346 KRTAP11-1Q8IUC1 163 aa5.68□□□□□ -1.5
ECM1-205ENST00000490346 PLEKHB2Q96CS7 222 aa5.68□□□□□ -1.5
ECM1-205ENST00000490346 SND1-IT1Q9HBX3 110 aa5.68□□□□□ -1.5
ECM1-205ENST00000490346 C22orf24Q9Y442 160 aa5.68□□□□□ -1.5
ECM1-205ENST00000490346 MYMXA0A1B0GTQ4 84 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 J3QQQ9 107 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 LINC00158P58513 81 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 HERV-K104P63124 156 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 UBE2BP63146 152 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 MEIG1Q5JSS6 88 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 C1orf137Q5JT78 98 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 HIST3H2BBQ8N257 126 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 PKHD1L1Q86WI1 4243 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 MYCBP2O75592 4640 aa5.67□□□□□ -1.5
ECM1-205ENST00000490346 S100A6P06703 90 aa5.66□□□□□ -1.5
ECM1-205ENST00000490346 SMIM13P0DJ93 91 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms