RNA–Protein interactions for RNA: ENST00000489502.5

HLA-F-229, Transcript of major histocompatibility complex, class I, F, humanhuman

Gene HLA-F, Length 489 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-F-229ENST00000489502 Q8IZM0 81 aa9.19□□□□□ -0.94
HLA-F-229ENST00000489502 SPACA4Q8TDM5 124 aa9.19□□□□□ -0.94
HLA-F-229ENST00000489502 MRPL35Q9NZE8 188 aaKnown RBP9.19□□□□□ -0.94
HLA-F-229ENST00000489502 HSPB8Q9UJY1 196 aa9.19□□□□□ -0.94
HLA-F-229ENST00000489502 FAT1Q14517 4588 aa9.19□□□□□ -0.94
HLA-F-229ENST00000489502 F8VRH5 84 aa9.18□□□□□ -0.94
HLA-F-229ENST00000489502 RPL18AQ02543 176 aaKnown RBP9.18□□□□□ -0.94
HLA-F-229ENST00000489502 CIRBPQ14011 172 aaKnown RBP9.18□□□□□ -0.94
HLA-F-229ENST00000489502 ODF1Q14990 250 aa9.18□□□□□ -0.94
HLA-F-229ENST00000489502 TMEM170BQ5T4T1 132 aa9.18□□□□□ -0.94
HLA-F-229ENST00000489502 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 F8WDY8 70 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 CKS1BP61024 79 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 MAJINQ3KP22 176 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 C6orf226Q5I0X4 101 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 COX7B2Q8TF08 81 aa9.17□□□□□ -0.94
HLA-F-229ENST00000489502 RNF151Q2KHN1 245 aa9.16□□□□□ -0.94
HLA-F-229ENST00000489502 C9orf116Q5BN46 136 aaPredicted RBP9.16□□□□□ -0.94
HLA-F-229ENST00000489502 COA6Q5JTJ3 125 aaKnown RBP9.16□□□□□ -0.94
HLA-F-229ENST00000489502 Q8N1X5 172 aa9.16□□□□□ -0.94
HLA-F-229ENST00000489502 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
HLA-F-229ENST00000489502 PKIGQ9Y2B9 76 aa9.16□□□□□ -0.94
HLA-F-229ENST00000489502 A0A087WYN8 130 aa9.15□□□□□ -0.94
HLA-F-229ENST00000489502 IGLV5-39A0A0G2JS06 123 aa9.15□□□□□ -0.94
HLA-F-229ENST00000489502 PTTG1IPP53801 180 aa9.15□□□□□ -0.94
HLA-F-229ENST00000489502 PMCHL2Q9BQD1 86 aa9.15□□□□□ -0.94
HLA-F-229ENST00000489502 TRBV30A0A0K0K1B3 111 aa9.14□□□□□ -0.95
HLA-F-229ENST00000489502 Q5VSD8 79 aa9.14□□□□□ -0.95
HLA-F-229ENST00000489502 LINC00528Q8N1L1 170 aa9.14□□□□□ -0.95
HLA-F-229ENST00000489502 DPH3Q96FX2 82 aa9.14□□□□□ -0.95
HLA-F-229ENST00000489502 CXCL5P42830 114 aa9.13□□□□□ -0.95
HLA-F-229ENST00000489502 MAP1LC3CQ9BXW4 147 aa9.13□□□□□ -0.95
HLA-F-229ENST00000489502 TMEM223A0PJW6 202 aa9.12□□□□□ -0.95
HLA-F-229ENST00000489502 Q6ZRP5 223 aa9.12□□□□□ -0.95
HLA-F-229ENST00000489502 STPG4Q8N801 248 aa9.12□□□□□ -0.95
HLA-F-229ENST00000489502 EPM2AB3EWF7 344 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 TLX1NBP0CAT3 122 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 GAGE2EQ4V326 116 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 PLAC8Q9NZF1 115 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 LINC00474Q9P2X8 69 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 GAGE2DQ9UEU5 116 aa9.11□□□□□ -0.95
HLA-F-229ENST00000489502 SYS1-DBNDD2H3BUS1 97 aa9.1□□□□□ -0.95
HLA-F-229ENST00000489502 DPM2O94777 84 aa9.1□□□□□ -0.95
HLA-F-229ENST00000489502 PLNP26678 52 aa9.1□□□□□ -0.95
HLA-F-229ENST00000489502 NDUFC2-KCTD14E9PQ53 114 aa9.09□□□□□ -0.95
HLA-F-229ENST00000489502 A0A1W2PNN7 141 aa9.08□□□□□ -0.96
HLA-F-229ENST00000489502 FAM229AH3BQW9 127 aa9.08□□□□□ -0.96
HLA-F-229ENST00000489502 IGKCP01834 107 aa9.08□□□□□ -0.96
HLA-F-229ENST00000489502 C3orf79P0CE67 100 aa9.08□□□□□ -0.96
HLA-F-229ENST00000489502 ABCA13Q86UQ4 5058 aa9.08□□□□□ -0.96
HLA-F-229ENST00000489502 SRRM2Q9UQ35 2752 aaKnown RBP9.08□□□□□ -0.96
HLA-F-229ENST00000489502 FAM168BA1KXE4 195 aa9.07□□□□□ -0.96
HLA-F-229ENST00000489502 KRTDAPP60985 99 aa9.07□□□□□ -0.96
HLA-F-229ENST00000489502 ZNF625Q96I27 306 aaPredicted RBP9.07□□□□□ -0.96
HLA-F-229ENST00000489502 VPS13BQ7Z7G8 4022 aa9.06□□□□□ -0.96
HLA-F-229ENST00000489502 TSPEAR-AS2P59090 65 aa9.06□□□□□ -0.96
HLA-F-229ENST00000489502 C9orf129Q5T035 196 aaKnown RBP9.06□□□□□ -0.96
HLA-F-229ENST00000489502 HIST3H2BBQ8N257 126 aa9.06□□□□□ -0.96
HLA-F-229ENST00000489502 XAGE1AQ9HD64 81 aa9.06□□□□□ -0.96
HLA-F-229ENST00000489502 LINC01545Q5VT33 79 aa9.05□□□□□ -0.96
HLA-F-229ENST00000489502 PET117Q6UWS5 81 aa9.05□□□□□ -0.96
HLA-F-229ENST00000489502 FAM19A5Q7Z5A7 132 aaPredicted RBP9.05□□□□□ -0.96
HLA-F-229ENST00000489502 S100A6P06703 90 aa9.04□□□□□ -0.96
HLA-F-229ENST00000489502 RPL37AP61513 92 aaKnown RBP9.04□□□□□ -0.96
HLA-F-229ENST00000489502 PLA2G1BP04054 148 aaKnown RBP9.03□□□□□ -0.96
HLA-F-229ENST00000489502 PFN2P35080 140 aa9.03□□□□□ -0.96
HLA-F-229ENST00000489502 HERVK_113P61574 105 aa9.03□□□□□ -0.96
HLA-F-229ENST00000489502 ERG28Q9UKR5 140 aa9.03□□□□□ -0.96
HLA-F-229ENST00000489502 LEPROTO15243 131 aa9.02□□□□□ -0.97
HLA-F-229ENST00000489502 S100A2P29034 98 aa9.02□□□□□ -0.97
HLA-F-229ENST00000489502 KRTAP10-4P60372 401 aaPredicted RBP9.02□□□□□ -0.97
HLA-F-229ENST00000489502 PHF5AQ7RTV0 110 aaKnown RBP9.02□□□□□ -0.97
HLA-F-229ENST00000489502 KRTAP7-1Q8IUC3 87 aa9.02□□□□□ -0.97
HLA-F-229ENST00000489502 C7orf33Q8WU49 177 aa9.02□□□□□ -0.97
HLA-F-229ENST00000489502 HIST1H2BLQ99880 126 aa9.02□□□□□ -0.97
HLA-F-229ENST00000489502 SERTAD4-AS1Q5TG53 156 aa9.01□□□□□ -0.97
HLA-F-229ENST00000489502 PLEKHB2Q96CS7 222 aa9.01□□□□□ -0.97
HLA-F-229ENST00000489502 NDUFA12Q9UI09 145 aa9.01□□□□□ -0.97
HLA-F-229ENST00000489502 FLG2Q5D862 2391 aaPredicted RBP9.01□□□□□ -0.97
HLA-F-229ENST00000489502 PCLOQ9Y6V0 5065 aa9□□□□□ -0.97
HLA-F-229ENST00000489502 J3QQQ9 107 aa9□□□□□ -0.97
HLA-F-229ENST00000489502 M0QXV9 152 aa9□□□□□ -0.97
HLA-F-229ENST00000489502 SNRPEP62304 92 aaKnown RBP9□□□□□ -0.97
HLA-F-229ENST00000489502 SFTA2Q6UW10 78 aa9□□□□□ -0.97
HLA-F-229ENST00000489502 A0A0U1RRA0 63 aa8.99□□□□□ -0.97
HLA-F-229ENST00000489502 C20orf202A1L168 122 aa8.99□□□□□ -0.97
HLA-F-229ENST00000489502 ATOH7Q8N100 152 aa8.99□□□□□ -0.97
HLA-F-229ENST00000489502 LGALS3P17931 250 aaKnown RBP8.98□□□□□ -0.97
HLA-F-229ENST00000489502 MEIG1Q5JSS6 88 aa8.98□□□□□ -0.97
HLA-F-229ENST00000489502 MYMXA0A1B0GTQ4 84 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 E9PLD3 99 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 SMIM13P0DJ93 91 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 INAFM2P0DMQ5 153 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 LINC00158P58513 81 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 PRR3P79522 188 aaKnown RBP8.97□□□□□ -0.97
HLA-F-229ENST00000489502 SND1-IT1Q9HBX3 110 aa8.97□□□□□ -0.97
HLA-F-229ENST00000489502 HNRNPA3P51991 378 aaKnown RBP8.96□□□□□ -0.98
HLA-F-229ENST00000489502 HERV-K104P63124 156 aa8.96□□□□□ -0.98
HLA-F-229ENST00000489502 COX17Q14061 63 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms