RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 GAGE12BA1L429 117 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 GAGE7O76087 117 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 GAGE12FP0CL80 117 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 GAGE12GP0CL81 117 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 GAGE12IP0CL82 117 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 ZNF25P17030 456 aaPredicted RBP4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 TMEM170BQ5T4T1 132 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 DGAT2L7PQ6IED9 249 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 Q6ZTI0 123 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 C2orf91Q6ZV80 131 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 DAZ4Q86SG3 579 aaKnown RBP4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 PCP2Q8IVA1 136 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 ORAOV1Q8WV07 137 aa4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 DAZ3Q9NR90 486 aaKnown RBP4.74□□□□□ -1.65
EXOSC3-206ENST00000489414 A0A096LPF7 62 aa4.73□□□□□ -1.65
EXOSC3-206ENST00000489414 C11orf86A6NJI1 115 aa4.73□□□□□ -1.65
EXOSC3-206ENST00000489414 E9PLD3 99 aa4.73□□□□□ -1.65
EXOSC3-206ENST00000489414 REG3GQ6UW15 175 aa4.73□□□□□ -1.65
EXOSC3-206ENST00000489414 PRADC1Q9BSG0 188 aa4.73□□□□□ -1.65
EXOSC3-206ENST00000489414 IGLV4-3A0A075B6K6 122 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 TRBV25-1A0A075B6N4 114 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 IGKV2D-26A0A0A0MRZ7 120 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 MYMXA0A1B0GTQ4 84 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 TRBV6-4A0A1B0GX49 114 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 ZNF815PA8K554 130 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 UBE2L6O14933 153 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 LGALS3P17931 250 aaKnown RBP4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 PTTG1IPP53801 180 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 TAL2Q16559 108 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 SCGB1D4Q6XE38 83 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 PLEKHB2Q96CS7 222 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 ZNF479Q96JC4 524 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 HIST1H4GQ99525 98 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 TIMM21Q9BVV7 248 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 TP73-AS1Q9UF72 201 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 COX11Q9Y6N1 276 aa4.72□□□□□ -1.65
EXOSC3-206ENST00000489414 IGLV4-69A0A075B6H9 119 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 IGHV3-38A0A0C4DH36 116 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 PLAC8L1A1L4L8 177 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 MT1HP80294 61 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 GAGE1Q13065 139 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 AMMECR1LQ6DCA0 310 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 GEMIN7Q9H840 131 aaKnown RBP4.71□□□□□ -1.66
EXOSC3-206ENST00000489414 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 IGKV2-29A2NJV5 120 aaPredicted RBP4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 H3BRM9 83 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 H7C423 109 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 SMIM13P0DJ93 91 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 UBE2D3P61077 147 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 UBE2D2P62837 147 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 MRPS36P82909 103 aaKnown RBP4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 GAGE4Q13068 117 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 GAGE5Q13069 117 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 SRSF9Q13242 221 aaKnown RBP eCLIP4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 VAMP3Q15836 100 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 GAGE13Q4V321 117 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 CEND1Q8N111 149 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 C10orf126Q8N4M7 172 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 SLC25A29Q8N8R3 303 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 OR5A1Q8NGJ0 315 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 AMELXQ99217 191 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 TMEM243Q9BU79 118 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 CHCHD7Q9BUK0 85 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 GTSF1LQ9H1H1 148 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 UBE2D4Q9Y2X8 147 aa4.7□□□□□ -1.66
EXOSC3-206ENST00000489414 TINCRA0A1B0GVN0 87 aa4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 J3QQQ9 107 aa4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 LEPROTO15243 131 aa4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 LINC00469Q8N7U9 141 aa4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 OPRPNQ99935 248 aaPredicted RBP4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 TTTY13Q9BZ97 58 aa4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 CSDC2Q9Y534 153 aaKnown RBP4.69□□□□□ -1.66
EXOSC3-206ENST00000489414 TMEM223A0PJW6 202 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 TAX1BP3O14907 124 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 LECT2O14960 151 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 ZNF22P17026 224 aaPredicted RBP4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 HERVK_113P63121 156 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 C21orf62-AS1Q17RA5 79 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 Q6ZUT4 128 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 WFDC10BQ8IUB3 73 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 TM2D2Q9BX73 214 aa4.68□□□□□ -1.66
EXOSC3-206ENST00000489414 KMT2DO14686 5537 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 C9orf118A6NHY6 69 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 TMEM238C9JI98 176 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 FHL2Q14192 279 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 GTF2H5Q6ZYL4 71 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 LINC00612Q8N6U2 182 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 VSIG2Q96IQ7 327 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 NHP2Q9NX24 153 aaKnown RBP4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 Q9UF83 564 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 PRO0255Q9UI72 69 aa4.67□□□□□ -1.66
EXOSC3-206ENST00000489414 GYPEP15421 78 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 UBE2D1P51668 147 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 FXYD2P54710 66 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 TIRAPP58753 221 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 UBE2V1Q13404 147 aa4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 RNASE13Q5GAN3 156 aaKnown RBP4.66□□□□□ -1.66
EXOSC3-206ENST00000489414 ATP6V0E2Q8NHE4 81 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms