RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 SLC7A5P1Q8MH63 180 aa6.16□□□□□ -1.42
HDAC6-233ENST00000489352 SFT2D1Q8WV19 159 aa6.16□□□□□ -1.42
HDAC6-233ENST00000489352 SPRR4Q96PI1 79 aa6.16□□□□□ -1.42
HDAC6-233ENST00000489352 BIN3Q9NQY0 253 aa6.16□□□□□ -1.42
HDAC6-233ENST00000489352 A0A1B0GV50 99 aa6.15□□□□□ -1.42
HDAC6-233ENST00000489352 UQCC3Q6UW78 93 aa6.15□□□□□ -1.42
HDAC6-233ENST00000489352 MBD3L1Q8WWY6 194 aa6.15□□□□□ -1.42
HDAC6-233ENST00000489352 ATP6V1G1O75348 118 aa6.14□□□□□ -1.43
HDAC6-233ENST00000489352 TMEM126AQ9H061 195 aa6.14□□□□□ -1.43
HDAC6-233ENST00000489352 S100A1P23297 94 aa6.13□□□□□ -1.43
HDAC6-233ENST00000489352 TAGLN2P37802 199 aaKnown RBP6.13□□□□□ -1.43
HDAC6-233ENST00000489352 GNG4P50150 75 aa6.13□□□□□ -1.43
HDAC6-233ENST00000489352 PEA15Q15121 130 aa6.13□□□□□ -1.43
HDAC6-233ENST00000489352 LINC01551Q86U37 167 aa6.13□□□□□ -1.43
HDAC6-233ENST00000489352 ALKBH7Q9BT30 221 aaPredicted RBP6.13□□□□□ -1.43
HDAC6-233ENST00000489352 GEMIN7Q9H840 131 aaKnown RBP6.13□□□□□ -1.43
HDAC6-233ENST00000489352 TMEM238C9JI98 176 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 Q6ZN92 141 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 SMIM12Q96EX1 92 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 MANBALQ9NQG1 85 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 GNG13Q9P2W3 67 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 MUC12Q9UKN1 5478 aa6.12□□□□□ -1.43
HDAC6-233ENST00000489352 TRBV20OR9-2A0A075B6H5 130 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 IGLV5-37A0A075B6J1 123 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 F8VRH5 84 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 PPP1R17O96001 155 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 RPL39P62891 51 aaKnown RBP6.11□□□□□ -1.43
HDAC6-233ENST00000489352 NUDT10Q8NFP7 164 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 BORCS7Q96B45 105 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 NUDT11Q96G61 164 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 EIF5A2Q9GZV4 153 aaKnown RBP6.11□□□□□ -1.43
HDAC6-233ENST00000489352 SPANXA1Q9NS26 97 aa6.11□□□□□ -1.43
HDAC6-233ENST00000489352 CCL20P78556 96 aa6.1□□□□□ -1.43
HDAC6-233ENST00000489352 MRPS36P82909 103 aaKnown RBP6.1□□□□□ -1.43
HDAC6-233ENST00000489352 Q8IZM0 81 aa6.1□□□□□ -1.43
HDAC6-233ENST00000489352 LINC01561Q8N1V8 128 aa6.1□□□□□ -1.43
HDAC6-233ENST00000489352 IGLV9-49A0A0B4J1Y8 123 aa6.09□□□□□ -1.43
HDAC6-233ENST00000489352 SCO1O75880 301 aa6.09□□□□□ -1.43
HDAC6-233ENST00000489352 SUMO2P61956 95 aaKnown RBP6.09□□□□□ -1.43
HDAC6-233ENST00000489352 MOBPQ13875 183 aa6.09□□□□□ -1.43
HDAC6-233ENST00000489352 TMEM218A2RU14 115 aa6.08□□□□□ -1.44
HDAC6-233ENST00000489352 PPP1R2P9O14990 202 aa6.08□□□□□ -1.44
HDAC6-233ENST00000489352 TCAPO15273 167 aa6.08□□□□□ -1.44
HDAC6-233ENST00000489352 KRTAP19-6Q3LI70 58 aa6.08□□□□□ -1.44
HDAC6-233ENST00000489352 SSBP3-AS1Q7Z2R9 100 aa6.08□□□□□ -1.44
HDAC6-233ENST00000489352 IGLV6-57P01721 117 aa6.07□□□□□ -1.44
HDAC6-233ENST00000489352 F8W036 122 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 SMKR1H3BMG3 65 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 M0R378 163 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 PDE6DO43924 150 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 RAB4AP20338 218 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 CEBPGP53567 150 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 FAM104AQ969W3 186 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 SEC11CQ9BY50 192 aa6.06□□□□□ -1.44
HDAC6-233ENST00000489352 TMEM250H0YL14 139 aa6.05□□□□□ -1.44
HDAC6-233ENST00000489352 SRP19P09132 144 aaKnown RBP6.05□□□□□ -1.44
HDAC6-233ENST00000489352 NPSP0C0P6 89 aa6.05□□□□□ -1.44
HDAC6-233ENST00000489352 IFI27P40305 119 aaPredicted RBP6.05□□□□□ -1.44
HDAC6-233ENST00000489352 RAB5BP61020 215 aa6.05□□□□□ -1.44
HDAC6-233ENST00000489352 C11orf52Q96A22 123 aa6.05□□□□□ -1.44
HDAC6-233ENST00000489352 TMEM191AQ9H0A3 160 aa6.05□□□□□ -1.44
HDAC6-233ENST00000489352 C9JQL5 133 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 CXCL5P42830 114 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 KRTAP10-10P60014 251 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 FAM74A3Q4VXF1 159 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 AMN1Q8IY45 258 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 SVBPQ8N300 66 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 TIMM17AQ99595 171 aa6.04□□□□□ -1.44
HDAC6-233ENST00000489352 SNAPINO95295 136 aa6.03□□□□□ -1.44
HDAC6-233ENST00000489352 APOC3P02656 99 aa6.03□□□□□ -1.44
HDAC6-233ENST00000489352 MT2AP02795 61 aa6.03□□□□□ -1.44
HDAC6-233ENST00000489352 C10orf91Q5T1B1 145 aa6.03□□□□□ -1.44
HDAC6-233ENST00000489352 C2orf88Q9BSF0 95 aa6.03□□□□□ -1.44
HDAC6-233ENST00000489352 A8MWL6 223 aa6.02□□□□□ -1.45
HDAC6-233ENST00000489352 ADCYAP1P18509 176 aa6.02□□□□□ -1.45
HDAC6-233ENST00000489352 GAGE2AQ6NT46 116 aa6.02□□□□□ -1.45
HDAC6-233ENST00000489352 TEX43Q6ZNM6 134 aa6.02□□□□□ -1.45
HDAC6-233ENST00000489352 FAM231DQ6ZW35 169 aa6.02□□□□□ -1.45
HDAC6-233ENST00000489352 RPL37P61927 97 aaKnown RBP6.01□□□□□ -1.45
HDAC6-233ENST00000489352 RPL24P83731 157 aaKnown RBP6.01□□□□□ -1.45
HDAC6-233ENST00000489352 NRACQ8N912 160 aa6.01□□□□□ -1.45
HDAC6-233ENST00000489352 TMEM141Q96I45 108 aa6.01□□□□□ -1.45
HDAC6-233ENST00000489352 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
HDAC6-233ENST00000489352 A0A1B0GUT8 65 aa6□□□□□ -1.45
HDAC6-233ENST00000489352 GATCO43716 136 aaKnown RBP6□□□□□ -1.45
HDAC6-233ENST00000489352 SMCR5Q8TEV8 140 aa6□□□□□ -1.45
HDAC6-233ENST00000489352 SMIM7Q9BQ49 75 aa6□□□□□ -1.45
HDAC6-233ENST00000489352 NAT8Q9UHE5 227 aa6□□□□□ -1.45
HDAC6-233ENST00000489352 C20orf78Q9BR46 151 aa5.99□□□□□ -1.45
HDAC6-233ENST00000489352 LIMD2Q9BT23 127 aa5.99□□□□□ -1.45
HDAC6-233ENST00000489352 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 C20orf202A1L168 122 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 MT1FP04733 61 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 RHEBQ15382 184 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 LINC00483Q53H64 154 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 C9orf153Q5TBE3 101 aa5.98□□□□□ -1.45
HDAC6-233ENST00000489352 LGALS3P17931 250 aaKnown RBP5.97□□□□□ -1.45
HDAC6-233ENST00000489352 ADIRFQ15847 76 aa5.97□□□□□ -1.45
HDAC6-233ENST00000489352 RPS10P5Q9NQ39 176 aa5.97□□□□□ -1.45
HDAC6-233ENST00000489352 PYGO1Q9Y3Y4 419 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 137.4 ms