RNA–Protein interactions for RNA: ENST00000488591.1

CXCL12-207, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 2

Gene CXCL12, Length 596 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-207ENST00000488591 PLAC8Q9NZF1 115 aa9.56□□□□□ -0.88
CXCL12-207ENST00000488591 RPL18AQ02543 176 aaKnown RBP9.55□□□□□ -0.88
CXCL12-207ENST00000488591 C10orf25Q5T742 122 aa9.55□□□□□ -0.88
CXCL12-207ENST00000488591 Q8IZM0 81 aa9.55□□□□□ -0.88
CXCL12-207ENST00000488591 IGLV5-45A0A087WSX0 123 aa9.54□□□□□ -0.88
CXCL12-207ENST00000488591 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
CXCL12-207ENST00000488591 H3BRM9 83 aa9.54□□□□□ -0.88
CXCL12-207ENST00000488591 C6orf48Q9UBA6 75 aa9.54□□□□□ -0.88
CXCL12-207ENST00000488591 SRRM2Q9UQ35 2752 aaKnown RBP9.53□□□□□ -0.88
CXCL12-207ENST00000488591 SCO1O75880 301 aa9.53□□□□□ -0.88
CXCL12-207ENST00000488591 RPL37AP61513 92 aaKnown RBP9.53□□□□□ -0.88
CXCL12-207ENST00000488591 C2orf82Q6UX34 121 aa9.53□□□□□ -0.88
CXCL12-207ENST00000488591 J3QL48 77 aa9.52□□□□□ -0.89
CXCL12-207ENST00000488591 IGLC3P0DOY3 106 aa9.52□□□□□ -0.89
CXCL12-207ENST00000488591 C7orf33Q8WU49 177 aa9.52□□□□□ -0.89
CXCL12-207ENST00000488591 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
CXCL12-207ENST00000488591 LOC100996750A0A140TA64 210 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 SMIM1B2RUZ4 78 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 TLX1NBP0CAT3 122 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 CXCL5P42830 114 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 KRTAP4-6Q9BYQ5 205 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 VPS13BQ7Z7G8 4022 aa9.51□□□□□ -0.89
CXCL12-207ENST00000488591 F8VRH5 84 aa9.5□□□□□ -0.89
CXCL12-207ENST00000488591 SERF1AO75920 110 aa9.5□□□□□ -0.89
CXCL12-207ENST00000488591 SPINK8P0C7L1 97 aa9.5□□□□□ -0.89
CXCL12-207ENST00000488591 FAM19A2Q8N3H0 131 aa9.5□□□□□ -0.89
CXCL12-207ENST00000488591 COX7B2Q8TF08 81 aa9.5□□□□□ -0.89
CXCL12-207ENST00000488591 CHTOPQ9Y3Y2 248 aaKnown RBP9.5□□□□□ -0.89
CXCL12-207ENST00000488591 TRAV12-1A0A0B4J245 112 aa9.48□□□□□ -0.89
CXCL12-207ENST00000488591 NDUFC2-KCTD14E9PQ53 114 aa9.48□□□□□ -0.89
CXCL12-207ENST00000488591 GAGE2EQ4V326 116 aa9.48□□□□□ -0.89
CXCL12-207ENST00000488591 Q6ZRP5 223 aa9.48□□□□□ -0.89
CXCL12-207ENST00000488591 GAGE2DQ9UEU5 116 aa9.48□□□□□ -0.89
CXCL12-207ENST00000488591 LEPROTL1O95214 131 aa9.47□□□□□ -0.89
CXCL12-207ENST00000488591 ZNF22P17026 224 aaPredicted RBP9.47□□□□□ -0.89
CXCL12-207ENST00000488591 TMEM170BQ5T4T1 132 aa9.47□□□□□ -0.89
CXCL12-207ENST00000488591 FAT1Q14517 4588 aa9.47□□□□□ -0.89
CXCL12-207ENST00000488591 C11orf86A6NJI1 115 aa9.46□□□□□ -0.9
CXCL12-207ENST00000488591 C9orf116Q5BN46 136 aaPredicted RBP9.46□□□□□ -0.9
CXCL12-207ENST00000488591 A0A1W2PNN7 141 aa9.45□□□□□ -0.9
CXCL12-207ENST00000488591 LINC00310P59036 64 aa9.45□□□□□ -0.9
CXCL12-207ENST00000488591 KRTAP10-4P60372 401 aaPredicted RBP9.45□□□□□ -0.9
CXCL12-207ENST00000488591 HSPB8Q9UJY1 196 aa9.45□□□□□ -0.9
CXCL12-207ENST00000488591 IGLV5-39A0A0G2JS06 123 aa9.44□□□□□ -0.9
CXCL12-207ENST00000488591 S100A1P23297 94 aa9.44□□□□□ -0.9
CXCL12-207ENST00000488591 H0Y8G0 127 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 NUPR1O60356 82 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BKO60814 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BJP06899 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 FABP4P15090 132 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BOP23527 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BBP33778 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BDP58876 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BCP62807 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST2H2BEQ16778 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BHQ93079 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BNQ99877 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 HIST1H2BMQ99879 126 aa9.43□□□□□ -0.9
CXCL12-207ENST00000488591 SFTA2Q6UW10 78 aa9.41□□□□□ -0.9
CXCL12-207ENST00000488591 FAM19A5Q7Z5A7 132 aaPredicted RBP9.41□□□□□ -0.9
CXCL12-207ENST00000488591 FAM168BA1KXE4 195 aa9.4□□□□□ -0.9
CXCL12-207ENST00000488591 LORP23490 312 aaPredicted RBP9.4□□□□□ -0.9
CXCL12-207ENST00000488591 TMEM223A0PJW6 202 aa9.39□□□□□ -0.91
CXCL12-207ENST00000488591 PRR3P79522 188 aaKnown RBP9.39□□□□□ -0.91
CXCL12-207ENST00000488591 ODF1Q14990 250 aa9.39□□□□□ -0.91
CXCL12-207ENST00000488591 C9orf129Q5T035 196 aaKnown RBP9.39□□□□□ -0.91
CXCL12-207ENST00000488591 PHF5AQ7RTV0 110 aaKnown RBP9.39□□□□□ -0.91
CXCL12-207ENST00000488591 MAP1LC3CQ9BXW4 147 aa9.39□□□□□ -0.91
CXCL12-207ENST00000488591 PLNP26678 52 aa9.38□□□□□ -0.91
CXCL12-207ENST00000488591 XAGE1AQ9HD64 81 aa9.38□□□□□ -0.91
CXCL12-207ENST00000488591 FLG2Q5D862 2391 aaPredicted RBP9.38□□□□□ -0.91
CXCL12-207ENST00000488591 M0QXV9 152 aa9.36□□□□□ -0.91
CXCL12-207ENST00000488591 ATP6V1G1O75348 118 aa9.36□□□□□ -0.91
CXCL12-207ENST00000488591 DPM2O94777 84 aa9.35□□□□□ -0.91
CXCL12-207ENST00000488591 PFN2P35080 140 aa9.35□□□□□ -0.91
CXCL12-207ENST00000488591 HNRNPA3P51991 378 aaKnown RBP9.35□□□□□ -0.91
CXCL12-207ENST00000488591 COX17Q14061 63 aa9.35□□□□□ -0.91
CXCL12-207ENST00000488591 ERG28Q9UKR5 140 aa9.35□□□□□ -0.91
CXCL12-207ENST00000488591 UBE2BP63146 152 aa9.34□□□□□ -0.91
CXCL12-207ENST00000488591 ZNF625Q96I27 306 aaPredicted RBP9.34□□□□□ -0.91
CXCL12-207ENST00000488591 IGKCP01834 107 aa9.33□□□□□ -0.92
CXCL12-207ENST00000488591 HERVK_113P61574 105 aa9.33□□□□□ -0.92
CXCL12-207ENST00000488591 LBHQ53QV2 105 aaPredicted RBP9.33□□□□□ -0.92
CXCL12-207ENST00000488591 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
CXCL12-207ENST00000488591 PSORS1C2Q9UIG4 136 aa9.33□□□□□ -0.92
CXCL12-207ENST00000488591 KRTAP29-1A8MX34 341 aaPredicted RBP9.32□□□□□ -0.92
CXCL12-207ENST00000488591 OXTP01178 125 aa9.32□□□□□ -0.92
CXCL12-207ENST00000488591 COA6Q5JTJ3 125 aaKnown RBP9.32□□□□□ -0.92
CXCL12-207ENST00000488591 SERTAD4-AS1Q5TG53 156 aa9.32□□□□□ -0.92
CXCL12-207ENST00000488591 PMCHL2Q9BQD1 86 aa9.32□□□□□ -0.92
CXCL12-207ENST00000488591 C22orf24Q9Y442 160 aa9.32□□□□□ -0.92
CXCL12-207ENST00000488591 C1orf137Q5JT78 98 aa9.31□□□□□ -0.92
CXCL12-207ENST00000488591 SPINK6Q6UWN8 80 aa9.31□□□□□ -0.92
CXCL12-207ENST00000488591 SYS1-DBNDD2H3BUS1 97 aa9.3□□□□□ -0.92
CXCL12-207ENST00000488591 LINC00158P58513 81 aa9.3□□□□□ -0.92
CXCL12-207ENST00000488591 HERV-K104P63124 156 aa9.3□□□□□ -0.92
CXCL12-207ENST00000488591 PLEKHB2Q96CS7 222 aa9.3□□□□□ -0.92
CXCL12-207ENST00000488591 TP73-AS1Q9UF72 201 aa9.3□□□□□ -0.92
CXCL12-207ENST00000488591 PLA2G2DQ9UNK4 145 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms