RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 PEX7O00628 323 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 IGKV2D-28P01615 120 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 CD3DP04234 171 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 SLC25A6P12236 298 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 S100A10P60903 97 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 KRTAP19-6Q3LI70 58 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 LGALSLQ3ZCW2 172 aaPredicted RBP2.43□□□□□ -2.02
BRCA1-217ENST00000487825 SCGB2B2Q4G0G5 96 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 ANKRD29Q8N6D5 301 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 PACRGLQ8N7B6 248 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 FXYD5Q96DB9 178 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 MGST2Q99735 147 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM243Q9BU79 118 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 SLC25A2Q9BXI2 301 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 TPRKBQ9Y3C4 175 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 PHLDA3Q9Y5J5 127 aa2.43□□□□□ -2.02
BRCA1-217ENST00000487825 IGLV4-60A0A075B6I1 120 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 TRBV25-1A0A075B6N4 114 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 SPRR5A0A1B0GTR4 108 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 DUXBA0A1W2PPF3 345 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 APOMO95445 188 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 CSN1S1P47710 185 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 MP68P56378 58 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 KRTAP13-2Q52LG2 175 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 FAM74A4Q5TZK3 123 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 EIF5AL1Q6IS14 154 aaKnown RBP2.42□□□□□ -2.02
BRCA1-217ENST00000487825 ATP5L2Q7Z4Y8 100 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 C12orf45Q8N5I9 185 aaPredicted RBP2.42□□□□□ -2.02
BRCA1-217ENST00000487825 ORAOV1Q8WV07 137 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 TVP23CQ96ET8 276 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM101Q96IK0 257 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 YPEL4Q96NS1 127 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 LAMTOR3Q9UHA4 124 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 ERG28Q9UKR5 140 aa2.42□□□□□ -2.02
BRCA1-217ENST00000487825 PIGBOS1A0A0B4J2F0 54 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 A0A0J9YXY3 114 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 A0A1B0GVG6 124 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 BCL2P10415 239 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 RPL23P62829 140 aaKnown RBP2.41□□□□□ -2.02
BRCA1-217ENST00000487825 MRPS10P82664 201 aaKnown RBP2.41□□□□□ -2.02
BRCA1-217ENST00000487825 SYCNQ0VAF6 134 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 FABP9Q0Z7S8 132 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 IQCJQ1A5X6 159 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 ORMDL2Q53FV1 153 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 MIC13Q5XKP0 118 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 TMEM14EPQ6UXP3 125 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 FAM19A3Q7Z5A8 133 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 PRNTQ86SH4 94 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 SNX29P2Q8IUI4 249 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 LINC00526Q96FQ7 95 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 AQP10Q96PS8 301 aa2.41□□□□□ -2.02
BRCA1-217ENST00000487825 KMT2DO14686 5537 aa2.4□□□□□ -2.02
BRCA1-217ENST00000487825 TRBV6-1A0A0K0K1D8 114 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 C9JAW5 83 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 SCGB1C2P0DMR2 95 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 ZNF80P51504 273 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-217ENST00000487825 TAS2R30P59541 319 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 NCS1P62166 190 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 HERVK_113P63121 156 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 MEF2BQ02080 365 aaPredicted RBP2.4□□□□□ -2.03
BRCA1-217ENST00000487825 RHEBQ15382 184 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 OCIAD2Q56VL3 154 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 TMEM229BQ8NBD8 167 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 SCGB1C1Q8TD33 95 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 FAM167A-AS1Q96KT0 104 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 ANAPC13Q9BS18 74 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 NDFIP1Q9BT67 221 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 DERL1Q9BUN8 251 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 PSENENQ9NZ42 101 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 IL36BQ9NZH7 164 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 NAT8BQ9UHF3 227 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 LAMTOR2Q9Y2Q5 125 aa2.4□□□□□ -2.03
BRCA1-217ENST00000487825 IGHV1-24A0A0C4DH33 117 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 IGHV1-58A0A0C4DH39 117 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 M0R381 172 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 S100A4P26447 101 aaKnown RBP2.39□□□□□ -2.03
BRCA1-217ENST00000487825 S100A11P31949 105 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 NEDD8Q15843 81 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 Q6Q795 121 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 ZNF471Q9BX82 626 aaPredicted RBP2.39□□□□□ -2.03
BRCA1-217ENST00000487825 MED28Q9H204 178 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 NIT2Q9NQR4 276 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 KCNIP2Q9NS61 270 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 OR5AC2Q9NZP5 309 aa2.39□□□□□ -2.03
BRCA1-217ENST00000487825 SMIM31A0A1B0GVY4 71 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 C20orf202A1L168 122 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 FABP5P3A8MUU1 101 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 KRBOX1C9JBD0 128 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 C9JQL5 133 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 H3BVH4 76 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 SSSCA1O60232 199 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 RPL35P42766 123 aaKnown RBP2.38□□□□□ -2.03
BRCA1-217ENST00000487825 DEFA1P59665 94 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 UBE2BP63146 152 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 FAM229BQ4G0N7 80 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 COX6B2Q6YFQ2 88 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 LINC01551Q86U37 167 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 TCTE3Q8IZS6 198 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 TIMM17AQ99595 171 aa2.38□□□□□ -2.03
BRCA1-217ENST00000487825 SMIM3Q9BZL3 60 aa2.38□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 150.1 ms