RNA–Protein interactions for RNA: ENST00000487453.1

PRDM2-208, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 646 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-208ENST00000487453 HIST1H2BLQ99880 126 aa8.22□□□□□ -1.09
PRDM2-208ENST00000487453 PKIGQ9Y2B9 76 aa8.22□□□□□ -1.09
PRDM2-208ENST00000487453 PKHD1P08F94 4074 aa8.22□□□□□ -1.09
PRDM2-208ENST00000487453 TMEM223A0PJW6 202 aa8.21□□□□□ -1.1
PRDM2-208ENST00000487453 CXCL5P42830 114 aa8.21□□□□□ -1.1
PRDM2-208ENST00000487453 HAMPP81172 84 aa8.21□□□□□ -1.1
PRDM2-208ENST00000487453 TMA7Q9Y2S6 64 aaKnown RBP8.21□□□□□ -1.1
PRDM2-208ENST00000487453 IGLV5-39A0A0G2JS06 123 aa8.2□□□□□ -1.1
PRDM2-208ENST00000487453 C20orf202A1L168 122 aa8.2□□□□□ -1.1
PRDM2-208ENST00000487453 RPL18AQ02543 176 aaKnown RBP8.2□□□□□ -1.1
PRDM2-208ENST00000487453 SDIM1Q6ZPB5 146 aa8.2□□□□□ -1.1
PRDM2-208ENST00000487453 C6orf48Q9UBA6 75 aa8.2□□□□□ -1.1
PRDM2-208ENST00000487453 IGKV2-24A0A0C4DH68 120 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 TRBV30A0A0K0K1B3 111 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 LOC107984640A0A0U1RRK4 108 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 CHTF8P0CG12 524 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 HERVK_113P61574 105 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 LINC01545Q5VT33 79 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 FAM30AQ9NZY2 134 aa8.19□□□□□ -1.1
PRDM2-208ENST00000487453 A0A096LNI7 61 aa8.18□□□□□ -1.1
PRDM2-208ENST00000487453 C5orf52A6NGY3 159 aa8.18□□□□□ -1.1
PRDM2-208ENST00000487453 CDK2AP2O75956 126 aa8.18□□□□□ -1.1
PRDM2-208ENST00000487453 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
PRDM2-208ENST00000487453 Q6ZSA8 131 aa8.18□□□□□ -1.1
PRDM2-208ENST00000487453 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.18□□□□□ -1.1
PRDM2-208ENST00000487453 GAGE2BQ13066 116 aa8.17□□□□□ -1.1
PRDM2-208ENST00000487453 C9orf116Q5BN46 136 aaPredicted RBP8.17□□□□□ -1.1
PRDM2-208ENST00000487453 DPH3Q96FX2 82 aa8.17□□□□□ -1.1
PRDM2-208ENST00000487453 DNAH5Q8TE73 4624 aa8.17□□□□□ -1.1
PRDM2-208ENST00000487453 PANO1I0J062 215 aa8.16□□□□□ -1.1
PRDM2-208ENST00000487453 DYNC1H1Q14204 4646 aaKnown RBP8.16□□□□□ -1.1
PRDM2-208ENST00000487453 SCXQ7RTU7 201 aa8.16□□□□□ -1.1
PRDM2-208ENST00000487453 BIRC6Q9NR09 4857 aa8.16□□□□□ -1.1
PRDM2-208ENST00000487453 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
PRDM2-208ENST00000487453 MAJINQ3KP22 176 aa8.15□□□□□ -1.1
PRDM2-208ENST00000487453 SFTA2Q6UW10 78 aa8.15□□□□□ -1.1
PRDM2-208ENST00000487453 ATOH7Q8N100 152 aa8.15□□□□□ -1.1
PRDM2-208ENST00000487453 SPACA4Q8TDM5 124 aa8.15□□□□□ -1.1
PRDM2-208ENST00000487453 NDUFC2-KCTD14E9PQ53 114 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 LEPROTO15243 131 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 XGP55808 180 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 GAGE2EQ4V326 116 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 Q6ZRP5 223 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 PLEKHB2Q96CS7 222 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 ZNF625Q96I27 306 aaPredicted RBP8.14□□□□□ -1.11
PRDM2-208ENST00000487453 LINC00474Q9P2X8 69 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 GAGE2DQ9UEU5 116 aa8.14□□□□□ -1.11
PRDM2-208ENST00000487453 TLX1NBP0CAT3 122 aa8.13□□□□□ -1.11
PRDM2-208ENST00000487453 LGALS3P17931 250 aaKnown RBP8.13□□□□□ -1.11
PRDM2-208ENST00000487453 TSPEAR-AS2P59090 65 aa8.13□□□□□ -1.11
PRDM2-208ENST00000487453 CIRBPQ14011 172 aaKnown RBP8.13□□□□□ -1.11
PRDM2-208ENST00000487453 CIRBP-AS1Q8TBR5 109 aa8.13□□□□□ -1.11
PRDM2-208ENST00000487453 E9PLD3 99 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 J3QQQ9 107 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 PFN2P35080 140 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 AKR1D1P51857 326 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 STPG4Q8N801 248 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 NDUFA12Q9UI09 145 aa8.12□□□□□ -1.11
PRDM2-208ENST00000487453 A0A087WYN8 130 aa8.11□□□□□ -1.11
PRDM2-208ENST00000487453 ERG28Q9UKR5 140 aa8.11□□□□□ -1.11
PRDM2-208ENST00000487453 LRP1BQ9NZR2 4599 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 MYMXA0A1B0GTQ4 84 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 SCGB1D1O95968 90 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 HERV-K104P63124 156 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 MEIG1Q5JSS6 88 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 KIAA1109Q2LD37 5005 aa8.1□□□□□ -1.11
PRDM2-208ENST00000487453 SMR3BP02814 79 aaPredicted RBP8.09□□□□□ -1.11
PRDM2-208ENST00000487453 XAGE1AQ9HD64 81 aa8.09□□□□□ -1.11
PRDM2-208ENST00000487453 A0A0U1RRA0 63 aa8.08□□□□□ -1.12
PRDM2-208ENST00000487453 NMUP48645 174 aa8.08□□□□□ -1.12
PRDM2-208ENST00000487453 LINC00158P58513 81 aa8.08□□□□□ -1.12
PRDM2-208ENST00000487453 PLAC8Q9NZF1 115 aa8.08□□□□□ -1.12
PRDM2-208ENST00000487453 IGKV2D-26A0A0A0MRZ7 120 aa8.07□□□□□ -1.12
PRDM2-208ENST00000487453 COX17Q14061 63 aa8.07□□□□□ -1.12
PRDM2-208ENST00000487453 C9orf129Q5T035 196 aaKnown RBP8.07□□□□□ -1.12
PRDM2-208ENST00000487453 FAM19A5Q7Z5A7 132 aaPredicted RBP8.07□□□□□ -1.12
PRDM2-208ENST00000487453 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
PRDM2-208ENST00000487453 HSBP1L1C9JCN9 74 aa8.06□□□□□ -1.12
PRDM2-208ENST00000487453 SMIM13P0DJ93 91 aa8.06□□□□□ -1.12
PRDM2-208ENST00000487453 ANKRD39Q53RE8 183 aa8.06□□□□□ -1.12
PRDM2-208ENST00000487453 APOBP04114 4563 aaKnown RBP8.06□□□□□ -1.12
PRDM2-208ENST00000487453 A0A1W2PNN7 141 aa8.05□□□□□ -1.12
PRDM2-208ENST00000487453 ZNF815PA8K554 130 aa8.05□□□□□ -1.12
PRDM2-208ENST00000487453 LINC00587B1AMM8 73 aa8.05□□□□□ -1.12
PRDM2-208ENST00000487453 LINC00528Q8N1L1 170 aa8.05□□□□□ -1.12
PRDM2-208ENST00000487453 TTTY13Q9BZ97 58 aa8.05□□□□□ -1.12
PRDM2-208ENST00000487453 SND1-IT1Q9HBX3 110 aa8.04□□□□□ -1.12
PRDM2-208ENST00000487453 FAM229AH3BQW9 127 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 M0QXV9 152 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 Q8N1X5 172 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 MIR7-3HGQ8N6C7 128 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 C7orf33Q8WU49 177 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 RYR1P21817 5038 aa8.03□□□□□ -1.12
PRDM2-208ENST00000487453 A0A0J9YXY3 114 aa8.02□□□□□ -1.13
PRDM2-208ENST00000487453 SERTAD4-AS1Q5TG53 156 aa8.02□□□□□ -1.13
PRDM2-208ENST00000487453 Q5VSD8 79 aa8.02□□□□□ -1.13
PRDM2-208ENST00000487453 EPM2AB3EWF7 344 aa8.01□□□□□ -1.13
PRDM2-208ENST00000487453 JOSD1Q15040 202 aaPredicted RBP8.01□□□□□ -1.13
PRDM2-208ENST00000487453 SCGB1D4Q6XE38 83 aa8.01□□□□□ -1.13
PRDM2-208ENST00000487453 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms