RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 C11orf86A6NJI1 115 aa7.34□□□□□ -1.23
TRIM56-204ENST00000487252 UBE2V1Q13404 147 aa7.34□□□□□ -1.23
TRIM56-204ENST00000487252 SDIM1Q6ZPB5 146 aa7.34□□□□□ -1.23
TRIM56-204ENST00000487252 C9orf163Q8N9P6 203 aa7.34□□□□□ -1.23
TRIM56-204ENST00000487252 MYMXA0A1B0GTQ4 84 aa7.33□□□□□ -1.24
TRIM56-204ENST00000487252 CCL25O15444 150 aa7.33□□□□□ -1.24
TRIM56-204ENST00000487252 DAZ4Q86SG3 579 aaKnown RBP7.33□□□□□ -1.24
TRIM56-204ENST00000487252 FAM104AQ969W3 186 aa7.33□□□□□ -1.24
TRIM56-204ENST00000487252 PRADC1Q9BSG0 188 aa7.33□□□□□ -1.24
TRIM56-204ENST00000487252 DAZ3Q9NR90 486 aaKnown RBP7.33□□□□□ -1.24
TRIM56-204ENST00000487252 C9orf118A6NHY6 69 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 C14orf177Q52M58 125 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 REG3GQ6UW15 175 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 RMI2Q96E14 147 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 AMELXQ99217 191 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 CHCHD7Q9BUK0 85 aa7.32□□□□□ -1.24
TRIM56-204ENST00000487252 IGLV4-3A0A075B6K6 122 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 TRBV7-3A0A075B6L6 115 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 IGHV3-73A0A0B4J1V6 119 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 KRTAP9-7A8MTY7 169 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 HERVK_113P61574 105 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 CEND1Q8N111 149 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 SPANXA1Q9NS26 97 aa7.31□□□□□ -1.24
TRIM56-204ENST00000487252 PRR3P79522 188 aaKnown RBP7.3□□□□□ -1.24
TRIM56-204ENST00000487252 DGAT2L7PQ6IED9 249 aa7.3□□□□□ -1.24
TRIM56-204ENST00000487252 SPINK6Q6UWN8 80 aa7.3□□□□□ -1.24
TRIM56-204ENST00000487252 OPRPNQ99935 248 aaPredicted RBP7.3□□□□□ -1.24
TRIM56-204ENST00000487252 TIMM21Q9BVV7 248 aa7.3□□□□□ -1.24
TRIM56-204ENST00000487252 Q9UF83 564 aa7.3□□□□□ -1.24
TRIM56-204ENST00000487252 IGKV2D-24A0A075B6R9 120 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 TRAV4A0A0B4J268 109 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 TRBV10-1A0A0K0K1A3 114 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 A0A1B0GWB2 263 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 CIDEAO60543 219 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 PTTG1IPP53801 180 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 FXYD2P54710 66 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 VAMP3Q15836 100 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 OR5A1Q8NGJ0 315 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 GTSF1LQ9H1H1 148 aa7.29□□□□□ -1.24
TRIM56-204ENST00000487252 A0A087WYN8 130 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 TMEM223A0PJW6 202 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 SMIM13P0DJ93 91 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 AMMECR1LQ6DCA0 310 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 OR4C5Q8NGB2 326 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 VCX2Q9H322 139 aa7.28□□□□□ -1.24
TRIM56-204ENST00000487252 ZNF815PA8K554 130 aa7.27□□□□□ -1.25
TRIM56-204ENST00000487252 LEPROTO15243 131 aa7.27□□□□□ -1.25
TRIM56-204ENST00000487252 ZNF22P17026 224 aaPredicted RBP7.27□□□□□ -1.25
TRIM56-204ENST00000487252 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
TRIM56-204ENST00000487252 SRSF9Q13242 221 aaKnown RBP eCLIP7.27□□□□□ -1.25
TRIM56-204ENST00000487252 COTL1Q14019 142 aa7.27□□□□□ -1.25
TRIM56-204ENST00000487252 PLAC8Q9NZF1 115 aa7.27□□□□□ -1.25
TRIM56-204ENST00000487252 UBE2D4Q9Y2X8 147 aa7.27□□□□□ -1.25
TRIM56-204ENST00000487252 TSPEAR-AS2P59090 65 aa7.26□□□□□ -1.25
TRIM56-204ENST00000487252 SLC25A29Q8N8R3 303 aa7.26□□□□□ -1.25
TRIM56-204ENST00000487252 PLEKHB2Q96CS7 222 aa7.26□□□□□ -1.25
TRIM56-204ENST00000487252 SPANXB1Q9NS25 103 aaPredicted RBP7.26□□□□□ -1.25
TRIM56-204ENST00000487252 H3BUT2 72 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 J3QQQ9 107 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 UBE2D3P61077 147 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 UBE2D2P62837 147 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 TMEM170BQ5T4T1 132 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 C7orf33Q8WU49 177 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 HIST1H4GQ99525 98 aa7.25□□□□□ -1.25
TRIM56-204ENST00000487252 TINCRA0A1B0GVN0 87 aa7.24□□□□□ -1.25
TRIM56-204ENST00000487252 A0A1W2PPM0 123 aa7.24□□□□□ -1.25
TRIM56-204ENST00000487252 K7EP34 96 aa7.24□□□□□ -1.25
TRIM56-204ENST00000487252 RPL36AP83881 106 aaKnown RBP7.24□□□□□ -1.25
TRIM56-204ENST00000487252 FAM19A3Q7Z5A8 133 aa7.24□□□□□ -1.25
TRIM56-204ENST00000487252 SPACA4Q8TDM5 124 aa7.24□□□□□ -1.25
TRIM56-204ENST00000487252 RPL36ALQ969Q0 106 aaKnown RBP7.24□□□□□ -1.25
TRIM56-204ENST00000487252 CSDC2Q9Y534 153 aaKnown RBP7.24□□□□□ -1.25
TRIM56-204ENST00000487252 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.23□□□□□ -1.25
TRIM56-204ENST00000487252 IGLV5-45A0A087WSX0 123 aa7.23□□□□□ -1.25
TRIM56-204ENST00000487252 TRBV6-4A0A1B0GX49 114 aa7.23□□□□□ -1.25
TRIM56-204ENST00000487252 IGKV2-29A2NJV5 120 aaPredicted RBP7.23□□□□□ -1.25
TRIM56-204ENST00000487252 USP17L23D6RBM5 183 aa7.23□□□□□ -1.25
TRIM56-204ENST00000487252 LGALS3P17931 250 aaKnown RBP7.23□□□□□ -1.25
TRIM56-204ENST00000487252 GTF2H5Q6ZYL4 71 aa7.23□□□□□ -1.25
TRIM56-204ENST00000487252 NHP2Q9NX24 153 aaKnown RBP7.23□□□□□ -1.25
TRIM56-204ENST00000487252 GAGE10A6NGK3 116 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 K7ERJ3 54 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 LINC00694P0DN24 101 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 UBE2D1P51668 147 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 SCGB1D4Q6XE38 83 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 Q6ZUT4 128 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 RAB37Q96AX2 223 aa7.22□□□□□ -1.25
TRIM56-204ENST00000487252 NTM-AS1Q6ZSK4 140 aa7.21□□□□□ -1.26
TRIM56-204ENST00000487252 UBE2WQ96B02 151 aa7.21□□□□□ -1.26
TRIM56-204ENST00000487252 KLK12Q9UKR0 248 aa7.21□□□□□ -1.26
TRIM56-204ENST00000487252 IGHV1-58A0A0C4DH39 117 aa7.2□□□□□ -1.26
TRIM56-204ENST00000487252 H7C423 109 aa7.2□□□□□ -1.26
TRIM56-204ENST00000487252 CHTF8P0CG12 524 aa7.2□□□□□ -1.26
TRIM56-204ENST00000487252 FABP2P12104 132 aa7.2□□□□□ -1.26
TRIM56-204ENST00000487252 SMAGPQ0VAQ4 97 aa7.2□□□□□ -1.26
TRIM56-204ENST00000487252 NAA38Q9BRA0 125 aaKnown RBP7.2□□□□□ -1.26
TRIM56-204ENST00000487252 TMEM238LA0A1B0GVL6 79 aa7.19□□□□□ -1.26
TRIM56-204ENST00000487252 A6NJY4 79 aa7.19□□□□□ -1.26
TRIM56-204ENST00000487252 CNBPP62633 177 aaKnown RBP7.19□□□□□ -1.26
TRIM56-204ENST00000487252 SPCS1Q9Y6A9 102 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 146.5 ms