RNA–Protein interactions for RNA: ENST00000487172.1

PCOLCE-208, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 686 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-208ENST00000487172 LINC01545Q5VT33 79 aa12.45□□□□□ -0.42
PCOLCE-208ENST00000487172 UNQ6190/PRO20217Q6UXQ8 127 aa12.45□□□□□ -0.42
PCOLCE-208ENST00000487172 Q6ZSA8 131 aa12.45□□□□□ -0.42
PCOLCE-208ENST00000487172 LRP1BQ9NZR2 4599 aa12.45□□□□□ -0.42
PCOLCE-208ENST00000487172 TRBV30A0A0K0K1B3 111 aa12.44□□□□□ -0.42
PCOLCE-208ENST00000487172 IGKCP01834 107 aa12.44□□□□□ -0.42
PCOLCE-208ENST00000487172 CKS1BP61024 79 aa12.44□□□□□ -0.42
PCOLCE-208ENST00000487172 C10orf25Q5T742 122 aa12.44□□□□□ -0.42
PCOLCE-208ENST00000487172 HIST1H2BLQ99880 126 aa12.44□□□□□ -0.42
PCOLCE-208ENST00000487172 CDK2AP2O75956 126 aa12.43□□□□□ -0.42
PCOLCE-208ENST00000487172 C2orf82Q6UX34 121 aa12.43□□□□□ -0.42
PCOLCE-208ENST00000487172 PMCHL2Q9BQD1 86 aa12.43□□□□□ -0.42
PCOLCE-208ENST00000487172 FAM30AQ9NZY2 134 aa12.43□□□□□ -0.42
PCOLCE-208ENST00000487172 C6orf48Q9UBA6 75 aa12.43□□□□□ -0.42
PCOLCE-208ENST00000487172 KRTDAPP60985 99 aa12.42□□□□□ -0.42
PCOLCE-208ENST00000487172 LOC107984640A0A0U1RRK4 108 aa12.4□□□□□ -0.42
PCOLCE-208ENST00000487172 TLX1NBP0CAT3 122 aa12.4□□□□□ -0.42
PCOLCE-208ENST00000487172 XGP55808 180 aa12.39□□□□□ -0.43
PCOLCE-208ENST00000487172 CIRBPQ14011 172 aaKnown RBP12.39□□□□□ -0.43
PCOLCE-208ENST00000487172 DNAH8Q96JB1 4490 aa12.38□□□□□ -0.43
PCOLCE-208ENST00000487172 SFTA2Q6UW10 78 aa12.37□□□□□ -0.43
PCOLCE-208ENST00000487172 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.37□□□□□ -0.43
PCOLCE-208ENST00000487172 BIRC6Q9NR09 4857 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 A0A096LNI7 61 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 C20orf202A1L168 122 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 AKR1D1P51857 326 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 HERVK_113P61574 105 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 LINC00474Q9P2X8 69 aa12.36□□□□□ -0.43
PCOLCE-208ENST00000487172 PANO1I0J062 215 aa12.35□□□□□ -0.43
PCOLCE-208ENST00000487172 PTTG1IPP53801 180 aa12.35□□□□□ -0.43
PCOLCE-208ENST00000487172 SPACA4Q8TDM5 124 aa12.35□□□□□ -0.43
PCOLCE-208ENST00000487172 LEPROTO15243 131 aa12.34□□□□□ -0.43
PCOLCE-208ENST00000487172 CHTF8P0CG12 524 aa12.34□□□□□ -0.43
PCOLCE-208ENST00000487172 C9orf116Q5BN46 136 aaPredicted RBP12.34□□□□□ -0.43
PCOLCE-208ENST00000487172 NDUFC2-KCTD14E9PQ53 114 aa12.33□□□□□ -0.44
PCOLCE-208ENST00000487172 PLEKHB2Q96CS7 222 aa12.33□□□□□ -0.44
PCOLCE-208ENST00000487172 ZNF625Q96I27 306 aaPredicted RBP12.33□□□□□ -0.44
PCOLCE-208ENST00000487172 IGKV2-24A0A0C4DH68 120 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 E9PLD3 99 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 RPL18AQ02543 176 aaKnown RBP12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 GAGE2BQ13066 116 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 Q6ZRP5 223 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 SCXQ7RTU7 201 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 CIRBP-AS1Q8TBR5 109 aa12.32□□□□□ -0.44
PCOLCE-208ENST00000487172 J3QQQ9 107 aa12.3□□□□□ -0.44
PCOLCE-208ENST00000487172 MAJINQ3KP22 176 aa12.3□□□□□ -0.44
PCOLCE-208ENST00000487172 DPH3Q96FX2 82 aa12.3□□□□□ -0.44
PCOLCE-208ENST00000487172 A0A087WYN8 130 aa12.29□□□□□ -0.44
PCOLCE-208ENST00000487172 COX17Q14061 63 aa12.29□□□□□ -0.44
PCOLCE-208ENST00000487172 APOBP04114 4563 aaKnown RBP12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 TSPEAR-AS2P59090 65 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 HERV-K104P63124 156 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 HAMPP81172 84 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 STPG4Q8N801 248 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 PLAC8Q9NZF1 115 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 NDUFA12Q9UI09 145 aa12.28□□□□□ -0.44
PCOLCE-208ENST00000487172 MYMXA0A1B0GTQ4 84 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 EPM2AB3EWF7 344 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 NMUP48645 174 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 GAGE2EQ4V326 116 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 GAGE2DQ9UEU5 116 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 ERG28Q9UKR5 140 aa12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 TMA7Q9Y2S6 64 aaKnown RBP12.27□□□□□ -0.45
PCOLCE-208ENST00000487172 LGALS3P17931 250 aaKnown RBP12.25□□□□□ -0.45
PCOLCE-208ENST00000487172 LINC00587B1AMM8 73 aa12.24□□□□□ -0.45
PCOLCE-208ENST00000487172 ATOH7Q8N100 152 aa12.24□□□□□ -0.45
PCOLCE-208ENST00000487172 A0A1W2PNN7 141 aa12.23□□□□□ -0.45
PCOLCE-208ENST00000487172 PFN2P35080 140 aa12.23□□□□□ -0.45
PCOLCE-208ENST00000487172 C9orf129Q5T035 196 aaKnown RBP12.23□□□□□ -0.45
PCOLCE-208ENST00000487172 IGKV2D-26A0A0A0MRZ7 120 aa12.21□□□□□ -0.45
PCOLCE-208ENST00000487172 SCGB1D1O95968 90 aa12.2□□□□□ -0.46
PCOLCE-208ENST00000487172 SMR3BP02814 79 aaPredicted RBP12.2□□□□□ -0.46
PCOLCE-208ENST00000487172 ANKRD39Q53RE8 183 aa12.2□□□□□ -0.46
PCOLCE-208ENST00000487172 MEIG1Q5JSS6 88 aa12.2□□□□□ -0.46
PCOLCE-208ENST00000487172 XAGE1AQ9HD64 81 aa12.2□□□□□ -0.46
PCOLCE-208ENST00000487172 KIAA1109Q2LD37 5005 aa12.19□□□□□ -0.46
PCOLCE-208ENST00000487172 Q8N1X5 172 aa12.19□□□□□ -0.46
PCOLCE-208ENST00000487172 RYR1P21817 5038 aa12.18□□□□□ -0.46
PCOLCE-208ENST00000487172 SMIM13P0DJ93 91 aa12.18□□□□□ -0.46
PCOLCE-208ENST00000487172 LINC00158P58513 81 aa12.18□□□□□ -0.46
PCOLCE-208ENST00000487172 HSPG2P98160 4391 aa12.18□□□□□ -0.46
PCOLCE-208ENST00000487172 FAM168BA1KXE4 195 aa12.17□□□□□ -0.46
PCOLCE-208ENST00000487172 JOSD1Q15040 202 aaPredicted RBP12.17□□□□□ -0.46
PCOLCE-208ENST00000487172 KRTAP17-1Q9BYP8 105 aa12.17□□□□□ -0.46
PCOLCE-208ENST00000487172 SND1-IT1Q9HBX3 110 aa12.17□□□□□ -0.46
PCOLCE-208ENST00000487172 PLA2G2DQ9UNK4 145 aa12.17□□□□□ -0.46
PCOLCE-208ENST00000487172 HSBP1L1C9JCN9 74 aa12.16□□□□□ -0.46
PCOLCE-208ENST00000487172 KRTAP7-1Q8IUC3 87 aa12.16□□□□□ -0.46
PCOLCE-208ENST00000487172 A0A0J9YXY3 114 aa12.15□□□□□ -0.46
PCOLCE-208ENST00000487172 LINC00528Q8N1L1 170 aa12.15□□□□□ -0.46
PCOLCE-208ENST00000487172 A0A0U1RRA0 63 aa12.14□□□□□ -0.47
PCOLCE-208ENST00000487172 ZNF815PA8K554 130 aa12.14□□□□□ -0.47
PCOLCE-208ENST00000487172 FAM229AH3BQW9 127 aa12.14□□□□□ -0.47
PCOLCE-208ENST00000487172 SERTAD4-AS1Q5TG53 156 aa12.13□□□□□ -0.47
PCOLCE-208ENST00000487172 FAM19A5Q7Z5A7 132 aaPredicted RBP12.13□□□□□ -0.47
PCOLCE-208ENST00000487172 MIR7-3HGQ8N6C7 128 aa12.13□□□□□ -0.47
PCOLCE-208ENST00000487172 TTTY13Q9BZ97 58 aa12.13□□□□□ -0.47
PCOLCE-208ENST00000487172 C7orf33Q8WU49 177 aa12.12□□□□□ -0.47
PCOLCE-208ENST00000487172 TIMM17BO60830 172 aa12.11□□□□□ -0.47
PCOLCE-208ENST00000487172 IGLV5-37A0A075B6J1 123 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms