RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 C2orf82Q6UX34 121 aa7.5□□□□□ -1.21
LINC00996-202ENST00000486954 UNQ6190/PRO20217Q6UXQ8 127 aa7.5□□□□□ -1.21
LINC00996-202ENST00000486954 DPH3Q96FX2 82 aa7.5□□□□□ -1.21
LINC00996-202ENST00000486954 FAM30AQ9NZY2 134 aa7.5□□□□□ -1.21
LINC00996-202ENST00000486954 SYS1-DBNDD2H3BUS1 97 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 DPM2O94777 84 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 IGKCP01834 107 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 HERVK_113P61574 105 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 HAMPP81172 84 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 GAGE2BQ13066 116 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 C6orf48Q9UBA6 75 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 LRP1BQ9NZR2 4599 aa7.49□□□□□ -1.21
LINC00996-202ENST00000486954 A0A096LNI7 61 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 IGLV5-39A0A0G2JS06 123 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 TMEM223A0PJW6 202 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 C20orf202A1L168 122 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 XGP55808 180 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 MAJINQ3KP22 176 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 C10orf25Q5T742 122 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 SFTA2Q6UW10 78 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 PET117Q6UWS5 81 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 SCXQ7RTU7 201 aa7.48□□□□□ -1.21
LINC00996-202ENST00000486954 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
LINC00996-202ENST00000486954 CHTF8P0CG12 524 aa7.47□□□□□ -1.21
LINC00996-202ENST00000486954 PTTG1IPP53801 180 aa7.47□□□□□ -1.21
LINC00996-202ENST00000486954 KRTDAPP60985 99 aa7.47□□□□□ -1.21
LINC00996-202ENST00000486954 SPACA4Q8TDM5 124 aa7.47□□□□□ -1.21
LINC00996-202ENST00000486954 PMCHL2Q9BQD1 86 aa7.47□□□□□ -1.21
LINC00996-202ENST00000486954 TLX1NBP0CAT3 122 aa7.46□□□□□ -1.22
LINC00996-202ENST00000486954 CIRBPQ14011 172 aaKnown RBP7.46□□□□□ -1.22
LINC00996-202ENST00000486954 CIRBP-AS1Q8TBR5 109 aa7.46□□□□□ -1.22
LINC00996-202ENST00000486954 NDUFC2-KCTD14E9PQ53 114 aa7.45□□□□□ -1.22
LINC00996-202ENST00000486954 C3orf79P0CE67 100 aa7.45□□□□□ -1.22
LINC00996-202ENST00000486954 AKR1D1P51857 326 aa7.45□□□□□ -1.22
LINC00996-202ENST00000486954 HIST3H2BBQ8N257 126 aa7.45□□□□□ -1.22
LINC00996-202ENST00000486954 STPG4Q8N801 248 aa7.45□□□□□ -1.22
LINC00996-202ENST00000486954 A0A087WYN8 130 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 PANO1I0J062 215 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 GAGE2EQ4V326 116 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 LINC01545Q5VT33 79 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 PLEKHB2Q96CS7 222 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 GAGE2DQ9UEU5 116 aa7.44□□□□□ -1.22
LINC00996-202ENST00000486954 C9orf116Q5BN46 136 aaPredicted RBP7.43□□□□□ -1.22
LINC00996-202ENST00000486954 Q6ZRP5 223 aa7.43□□□□□ -1.22
LINC00996-202ENST00000486954 RYR1P21817 5038 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 FAM229AH3BQW9 127 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 LEPROTO15243 131 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 SMR3BP02814 79 aaPredicted RBP7.42□□□□□ -1.22
LINC00996-202ENST00000486954 LGALS3P17931 250 aaKnown RBP7.42□□□□□ -1.22
LINC00996-202ENST00000486954 SNRPEP62304 92 aaKnown RBP7.42□□□□□ -1.22
LINC00996-202ENST00000486954 Q8N1X5 172 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 HIST1H2BLQ99880 126 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 PLAC8Q9NZF1 115 aa7.42□□□□□ -1.22
LINC00996-202ENST00000486954 MYMXA0A1B0GTQ4 84 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 HERV-K104P63124 156 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 MEIG1Q5JSS6 88 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 LINC00528Q8N1L1 170 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 C7orf33Q8WU49 177 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 ERG28Q9UKR5 140 aa7.41□□□□□ -1.22
LINC00996-202ENST00000486954 KIAA1109Q2LD37 5005 aa7.4□□□□□ -1.22
LINC00996-202ENST00000486954 EPM2AB3EWF7 344 aa7.4□□□□□ -1.22
LINC00996-202ENST00000486954 PFN2P35080 140 aa7.4□□□□□ -1.22
LINC00996-202ENST00000486954 ZNF625Q96I27 306 aaPredicted RBP7.4□□□□□ -1.22
LINC00996-202ENST00000486954 NDUFA12Q9UI09 145 aa7.4□□□□□ -1.22
LINC00996-202ENST00000486954 APOBP04114 4563 aaKnown RBP7.39□□□□□ -1.23
LINC00996-202ENST00000486954 C5orf52A6NGY3 159 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 LINC00587B1AMM8 73 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 E9PLD3 99 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 J3QQQ9 107 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 NMUP48645 174 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 COX17Q14061 63 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 Q5VSD8 79 aa7.39□□□□□ -1.23
LINC00996-202ENST00000486954 PLA2G1BP04054 148 aaKnown RBP7.38□□□□□ -1.23
LINC00996-202ENST00000486954 FAM19A5Q7Z5A7 132 aaPredicted RBP7.38□□□□□ -1.23
LINC00996-202ENST00000486954 DNAH8Q96JB1 4490 aa7.38□□□□□ -1.23
LINC00996-202ENST00000486954 LINC00158P58513 81 aa7.37□□□□□ -1.23
LINC00996-202ENST00000486954 TSPEAR-AS2P59090 65 aa7.37□□□□□ -1.23
LINC00996-202ENST00000486954 XAGE1AQ9HD64 81 aa7.37□□□□□ -1.23
LINC00996-202ENST00000486954 RPL37AP61513 92 aaKnown RBP7.36□□□□□ -1.23
LINC00996-202ENST00000486954 C9orf129Q5T035 196 aaKnown RBP7.36□□□□□ -1.23
LINC00996-202ENST00000486954 A0A1W2PNN7 141 aa7.35□□□□□ -1.23
LINC00996-202ENST00000486954 HSBP1L1C9JCN9 74 aa7.35□□□□□ -1.23
LINC00996-202ENST00000486954 M0QXV9 152 aa7.35□□□□□ -1.23
LINC00996-202ENST00000486954 ATOH7Q8N100 152 aa7.35□□□□□ -1.23
LINC00996-202ENST00000486954 TMA7Q9Y2S6 64 aaKnown RBP7.35□□□□□ -1.23
LINC00996-202ENST00000486954 A0A0U1RRA0 63 aa7.34□□□□□ -1.23
LINC00996-202ENST00000486954 FAM168BA1KXE4 195 aa7.34□□□□□ -1.23
LINC00996-202ENST00000486954 HERC2O95714 4834 aa7.34□□□□□ -1.23
LINC00996-202ENST00000486954 SCGB1D1O95968 90 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 SMIM13P0DJ93 91 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 UBE2BP63146 152 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 NKAPP1Q8N9T2 125 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 SND1-IT1Q9HBX3 110 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 HSPG2P98160 4391 aa7.33□□□□□ -1.24
LINC00996-202ENST00000486954 ZNF815PA8K554 130 aa7.32□□□□□ -1.24
LINC00996-202ENST00000486954 RPL24P83731 157 aaKnown RBP7.32□□□□□ -1.24
LINC00996-202ENST00000486954 PHF5AQ7RTV0 110 aaKnown RBP7.32□□□□□ -1.24
LINC00996-202ENST00000486954 MIR7-3HGQ8N6C7 128 aa7.32□□□□□ -1.24
LINC00996-202ENST00000486954 LBHQ53QV2 105 aaPredicted RBP7.31□□□□□ -1.24
LINC00996-202ENST00000486954 SERTAD4-AS1Q5TG53 156 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms