RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 HIST1H2BDP58876 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST1H2BCP62807 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST2H2BEQ16778 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.2□□□□□ -1.1
SSR4-211ENST00000486204 C10orf25Q5T742 122 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST1H2BHQ93079 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST1H2BNQ99877 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 HIST1H2BMQ99879 126 aa8.2□□□□□ -1.1
SSR4-211ENST00000486204 SMIM1B2RUZ4 78 aa8.19□□□□□ -1.1
SSR4-211ENST00000486204 F8WDY8 70 aa8.19□□□□□ -1.1
SSR4-211ENST00000486204 LINC00469Q8N7U9 141 aa8.19□□□□□ -1.1
SSR4-211ENST00000486204 MRPL35Q9NZE8 188 aaKnown RBP8.19□□□□□ -1.1
SSR4-211ENST00000486204 LRP2P98164 4655 aa8.19□□□□□ -1.1
SSR4-211ENST00000486204 NDUFA1O15239 70 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 RNF151Q2KHN1 245 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 C2orf82Q6UX34 121 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 UNQ6190/PRO20217Q6UXQ8 127 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 Q8IZM0 81 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 IFI27L1Q96BM0 104 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 C6orf48Q9UBA6 75 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 PKHD1L1Q86WI1 4243 aa8.18□□□□□ -1.1
SSR4-211ENST00000486204 ZNF22P17026 224 aaPredicted RBP8.17□□□□□ -1.1
SSR4-211ENST00000486204 NDUFA6P56556 154 aa8.17□□□□□ -1.1
SSR4-211ENST00000486204 A0A087WYN8 130 aa8.16□□□□□ -1.1
SSR4-211ENST00000486204 TRAV12-1A0A0B4J245 112 aa8.16□□□□□ -1.1
SSR4-211ENST00000486204 IGKV2-24A0A0C4DH68 120 aa8.16□□□□□ -1.1
SSR4-211ENST00000486204 LOC107984640A0A0U1RRK4 108 aa8.16□□□□□ -1.1
SSR4-211ENST00000486204 C11orf86A6NJI1 115 aa8.16□□□□□ -1.1
SSR4-211ENST00000486204 PACRGQ96M98 296 aaPredicted RBP8.16□□□□□ -1.1
SSR4-211ENST00000486204 SPINK8P0C7L1 97 aa8.15□□□□□ -1.1
SSR4-211ENST00000486204 PTTG1IPP53801 180 aa8.15□□□□□ -1.1
SSR4-211ENST00000486204 PLAC8Q9NZF1 115 aa8.15□□□□□ -1.1
SSR4-211ENST00000486204 TOMM7Q9P0U1 55 aa8.15□□□□□ -1.1
SSR4-211ENST00000486204 PKIGQ9Y2B9 76 aa8.15□□□□□ -1.1
SSR4-211ENST00000486204 TRBV30A0A0K0K1B3 111 aa8.14□□□□□ -1.11
SSR4-211ENST00000486204 LEPROTL1O95214 131 aa8.14□□□□□ -1.11
SSR4-211ENST00000486204 TLX1NBP0CAT3 122 aa8.14□□□□□ -1.11
SSR4-211ENST00000486204 MAJINQ3KP22 176 aa8.14□□□□□ -1.11
SSR4-211ENST00000486204 CHTOPQ9Y3Y2 248 aaKnown RBP8.14□□□□□ -1.11
SSR4-211ENST00000486204 IGLV5-39A0A0G2JS06 123 aa8.13□□□□□ -1.11
SSR4-211ENST00000486204 F8VRH5 84 aa8.13□□□□□ -1.11
SSR4-211ENST00000486204 PRSS2P07478 247 aa8.13□□□□□ -1.11
SSR4-211ENST00000486204 KRTAP10-4P60372 401 aaPredicted RBP8.13□□□□□ -1.11
SSR4-211ENST00000486204 COX7B2Q8TF08 81 aa8.13□□□□□ -1.11
SSR4-211ENST00000486204 H3BRM9 83 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 GAGE2BQ13066 116 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 ODF1Q14990 250 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 C9orf116Q5BN46 136 aaPredicted RBP8.12□□□□□ -1.11
SSR4-211ENST00000486204 C6orf226Q5I0X4 101 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 COA6Q5JTJ3 125 aaKnown RBP8.12□□□□□ -1.11
SSR4-211ENST00000486204 Q6ZRP5 223 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 STPG4Q8N801 248 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 LINC00474Q9P2X8 69 aa8.12□□□□□ -1.11
SSR4-211ENST00000486204 FABP4P15090 132 aa8.11□□□□□ -1.11
SSR4-211ENST00000486204 CXCL5P42830 114 aa8.11□□□□□ -1.11
SSR4-211ENST00000486204 CKS1BP61024 79 aa8.11□□□□□ -1.11
SSR4-211ENST00000486204 RPL18AQ02543 176 aaKnown RBP8.11□□□□□ -1.11
SSR4-211ENST00000486204 TMEM170BQ5T4T1 132 aa8.1□□□□□ -1.11
SSR4-211ENST00000486204 HSPB8Q9UJY1 196 aa8.1□□□□□ -1.11
SSR4-211ENST00000486204 TNXBP22105 4242 aa8.1□□□□□ -1.11
SSR4-211ENST00000486204 NDUFC2-KCTD14E9PQ53 114 aa8.09□□□□□ -1.11
SSR4-211ENST00000486204 A0A1W2PNN7 141 aa8.08□□□□□ -1.12
SSR4-211ENST00000486204 TMEM223A0PJW6 202 aa8.08□□□□□ -1.12
SSR4-211ENST00000486204 H0Y8G0 127 aa8.08□□□□□ -1.12
SSR4-211ENST00000486204 DPH3Q96FX2 82 aa8.08□□□□□ -1.12
SSR4-211ENST00000486204 KRTAP7-1Q8IUC3 87 aa8.07□□□□□ -1.12
SSR4-211ENST00000486204 FAM168BA1KXE4 195 aa8.06□□□□□ -1.12
SSR4-211ENST00000486204 GAGE2EQ4V326 116 aa8.06□□□□□ -1.12
SSR4-211ENST00000486204 C9orf129Q5T035 196 aaKnown RBP8.06□□□□□ -1.12
SSR4-211ENST00000486204 GAGE2DQ9UEU5 116 aa8.06□□□□□ -1.12
SSR4-211ENST00000486204 RPL37AP61513 92 aaKnown RBP8.05□□□□□ -1.12
SSR4-211ENST00000486204 PMCHL2Q9BQD1 86 aa8.05□□□□□ -1.12
SSR4-211ENST00000486204 MAP1LC3CQ9BXW4 147 aa8.05□□□□□ -1.12
SSR4-211ENST00000486204 KRTAP9-2Q9BYQ4 174 aa8.05□□□□□ -1.12
SSR4-211ENST00000486204 MT1HL1P0DM35 61 aa8.04□□□□□ -1.12
SSR4-211ENST00000486204 PLNP26678 52 aa8.04□□□□□ -1.12
SSR4-211ENST00000486204 ZNF625Q96I27 306 aaPredicted RBP8.04□□□□□ -1.12
SSR4-211ENST00000486204 SYS1-DBNDD2H3BUS1 97 aa8.03□□□□□ -1.12
SSR4-211ENST00000486204 DPM2O94777 84 aa8.03□□□□□ -1.12
SSR4-211ENST00000486204 HNRNPA3P51991 378 aaKnown RBP8.02□□□□□ -1.13
SSR4-211ENST00000486204 C7orf33Q8WU49 177 aa8.02□□□□□ -1.13
SSR4-211ENST00000486204 XAGE1AQ9HD64 81 aa8.02□□□□□ -1.13
SSR4-211ENST00000486204 IGKCP01834 107 aa8.01□□□□□ -1.13
SSR4-211ENST00000486204 C3orf79P0CE67 100 aa8.01□□□□□ -1.13
SSR4-211ENST00000486204 TSPEAR-AS2P59090 65 aa8.01□□□□□ -1.13
SSR4-211ENST00000486204 LINC01545Q5VT33 79 aa8.01□□□□□ -1.13
SSR4-211ENST00000486204 SFTA2Q6UW10 78 aa8.01□□□□□ -1.13
SSR4-211ENST00000486204 PHF5AQ7RTV0 110 aaKnown RBP8.01□□□□□ -1.13
SSR4-211ENST00000486204 FAM19A5Q7Z5A7 132 aaPredicted RBP8.01□□□□□ -1.13
SSR4-211ENST00000486204 PRR3P79522 188 aaKnown RBP8□□□□□ -1.13
SSR4-211ENST00000486204 ERG28Q9UKR5 140 aa8□□□□□ -1.13
SSR4-211ENST00000486204 PET117Q6UWS5 81 aa7.99□□□□□ -1.13
SSR4-211ENST00000486204 KRTAP11-1Q8IUC1 163 aa7.99□□□□□ -1.13
SSR4-211ENST00000486204 M0QXV9 152 aa7.98□□□□□ -1.13
SSR4-211ENST00000486204 LEPROTO15243 131 aa7.98□□□□□ -1.13
SSR4-211ENST00000486204 PFN2P35080 140 aa7.98□□□□□ -1.13
SSR4-211ENST00000486204 COX17Q14061 63 aa7.98□□□□□ -1.13
SSR4-211ENST00000486204 HIST3H2BBQ8N257 126 aa7.98□□□□□ -1.13
SSR4-211ENST00000486204 KRTAP9-6A0A140TA67 174 aa7.97□□□□□ -1.13
SSR4-211ENST00000486204 KRTDAPP60985 99 aa7.96□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms