RNA–Protein interactions for RNA: ENST00000486045.1

RHBDF1-209, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 2

Gene RHBDF1, Length 914 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-209ENST00000486045 LINC00242Q5T6M2 205 aa11.43□□□□□ -0.58
RHBDF1-209ENST00000486045 FAM19A3Q7Z5A8 133 aa11.43□□□□□ -0.58
RHBDF1-209ENST00000486045 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
RHBDF1-209ENST00000486045 GVQW2A0A096LPI5 108 aaPredicted RBP11.42□□□□□ -0.58
RHBDF1-209ENST00000486045 SEC11AP67812 179 aa11.42□□□□□ -0.58
RHBDF1-209ENST00000486045 IGHV3OR16-9A0A0B4J2B5 98 aa11.4□□□□□ -0.58
RHBDF1-209ENST00000486045 A0A0J9YXV3 536 aa11.4□□□□□ -0.58
RHBDF1-209ENST00000486045 COX7A2LO14548 114 aa11.4□□□□□ -0.58
RHBDF1-209ENST00000486045 LINC00526Q96FQ7 95 aa11.4□□□□□ -0.58
RHBDF1-209ENST00000486045 PACRGQ96M98 296 aaPredicted RBP11.4□□□□□ -0.58
RHBDF1-209ENST00000486045 TRAV12-1A0A0B4J245 112 aa11.39□□□□□ -0.59
RHBDF1-209ENST00000486045 HERVK_113P63121 156 aa11.39□□□□□ -0.59
RHBDF1-209ENST00000486045 C5orf38Q86SI9 138 aa11.39□□□□□ -0.59
RHBDF1-209ENST00000486045 GEMIN7Q9H840 131 aaKnown RBP11.39□□□□□ -0.59
RHBDF1-209ENST00000486045 TINCRA0A1B0GVN0 87 aa11.38□□□□□ -0.59
RHBDF1-209ENST00000486045 MAP1LC3CQ9BXW4 147 aa11.38□□□□□ -0.59
RHBDF1-209ENST00000486045 MALP21145 153 aa11.37□□□□□ -0.59
RHBDF1-209ENST00000486045 HIST3H2BBQ8N257 126 aa11.37□□□□□ -0.59
RHBDF1-209ENST00000486045 CHTOPQ9Y3Y2 248 aaKnown RBP11.37□□□□□ -0.59
RHBDF1-209ENST00000486045 IGLC3P0DOY3 106 aa11.36□□□□□ -0.59
RHBDF1-209ENST00000486045 SNRPEP62304 92 aaKnown RBP11.36□□□□□ -0.59
RHBDF1-209ENST00000486045 IGLV4-69A0A075B6H9 119 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 A0A087WZ39 114 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 IGHV1-58A0A0C4DH39 117 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 H0Y8G0 127 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 APOMO95445 188 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 S100A2P29034 98 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 CDKN2A-AS1Q9UH64 79 aa11.35□□□□□ -0.59
RHBDF1-209ENST00000486045 C5orf52A6NGY3 159 aa11.34□□□□□ -0.59
RHBDF1-209ENST00000486045 KRTAP10-8P60410 259 aa11.34□□□□□ -0.59
RHBDF1-209ENST00000486045 SPINK6Q6UWN8 80 aa11.34□□□□□ -0.59
RHBDF1-209ENST00000486045 LINC01561Q8N1V8 128 aa11.34□□□□□ -0.59
RHBDF1-209ENST00000486045 CARD19Q96LW7 228 aa11.34□□□□□ -0.59
RHBDF1-209ENST00000486045 IGLV5-45A0A087WSX0 123 aa11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 F8VRH5 84 aa11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 SYS1-DBNDD2H3BUS1 97 aa11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 LINC00469Q8N7U9 141 aa11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 MRPL35Q9NZE8 188 aaKnown RBP11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 LINC00474Q9P2X8 69 aa11.33□□□□□ -0.6
RHBDF1-209ENST00000486045 C11orf86A6NJI1 115 aa11.31□□□□□ -0.6
RHBDF1-209ENST00000486045 C3orf79P0CE67 100 aa11.31□□□□□ -0.6
RHBDF1-209ENST00000486045 SRSF9Q13242 221 aaKnown RBP eCLIP11.31□□□□□ -0.6
RHBDF1-209ENST00000486045 REG3GQ6UW15 175 aa11.31□□□□□ -0.6
RHBDF1-209ENST00000486045 HIST1H2BLQ99880 126 aa11.31□□□□□ -0.6
RHBDF1-209ENST00000486045 H3BRM9 83 aa11.3□□□□□ -0.6
RHBDF1-209ENST00000486045 PET117Q6UWS5 81 aa11.3□□□□□ -0.6
RHBDF1-209ENST00000486045 Q6ZRP5 223 aa11.3□□□□□ -0.6
RHBDF1-209ENST00000486045 ZNF561-AS1K7EIQ3 104 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 ZNF22P17026 224 aaPredicted RBP11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 KRTDAPP60985 99 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 SYCNQ0VAF6 134 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 OR10D4PQ8NGN7 298 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 ORAOV1Q8WV07 137 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 PKIGQ9Y2B9 76 aa11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 TMA7Q9Y2S6 64 aaKnown RBP11.29□□□□□ -0.6
RHBDF1-209ENST00000486045 TMEM170BQ5T4T1 132 aa11.28□□□□□ -0.6
RHBDF1-209ENST00000486045 DPM2O94777 84 aa11.27□□□□□ -0.61
RHBDF1-209ENST00000486045 PLNP26678 52 aa11.27□□□□□ -0.61
RHBDF1-209ENST00000486045 PTTG1IPP53801 180 aa11.27□□□□□ -0.61
RHBDF1-209ENST00000486045 GAGE2BQ13066 116 aa11.27□□□□□ -0.61
RHBDF1-209ENST00000486045 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
RHBDF1-209ENST00000486045 SMIM1B2RUZ4 78 aa11.26□□□□□ -0.61
RHBDF1-209ENST00000486045 SPINK8P0C7L1 97 aa11.26□□□□□ -0.61
RHBDF1-209ENST00000486045 LINC01545Q5VT33 79 aa11.26□□□□□ -0.61
RHBDF1-209ENST00000486045 IGKCP01834 107 aa11.25□□□□□ -0.61
RHBDF1-209ENST00000486045 SPAG11BQ08648 103 aa11.25□□□□□ -0.61
RHBDF1-209ENST00000486045 KIAA0087Q14695 138 aa11.25□□□□□ -0.61
RHBDF1-209ENST00000486045 C2orf48Q96LS8 159 aa11.25□□□□□ -0.61
RHBDF1-209ENST00000486045 A0A1W2PNN7 141 aa11.24□□□□□ -0.61
RHBDF1-209ENST00000486045 F8WDY8 70 aa11.24□□□□□ -0.61
RHBDF1-209ENST00000486045 LOC107984640A0A0U1RRK4 108 aa11.23□□□□□ -0.61
RHBDF1-209ENST00000486045 TMEM223A0PJW6 202 aa11.23□□□□□ -0.61
RHBDF1-209ENST00000486045 PRSS2P07478 247 aa11.23□□□□□ -0.61
RHBDF1-209ENST00000486045 C6orf226Q5I0X4 101 aa11.23□□□□□ -0.61
RHBDF1-209ENST00000486045 TOMM7Q9P0U1 55 aa11.23□□□□□ -0.61
RHBDF1-209ENST00000486045 Q8IZM0 81 aa11.22□□□□□ -0.61
RHBDF1-209ENST00000486045 CAMK2N2Q96S95 79 aa11.22□□□□□ -0.61
RHBDF1-209ENST00000486045 IGLV5-39A0A0G2JS06 123 aa11.21□□□□□ -0.61
RHBDF1-209ENST00000486045 C20orf202A1L168 122 aa11.21□□□□□ -0.61
RHBDF1-209ENST00000486045 COX7B2Q8TF08 81 aa11.21□□□□□ -0.61
RHBDF1-209ENST00000486045 PSORS1C2Q9UIG4 136 aa11.2□□□□□ -0.62
RHBDF1-209ENST00000486045 NDUFA1O15239 70 aa11.19□□□□□ -0.62
RHBDF1-209ENST00000486045 AKR1D1P51857 326 aa11.19□□□□□ -0.62
RHBDF1-209ENST00000486045 CKS1BP61024 79 aa11.19□□□□□ -0.62
RHBDF1-209ENST00000486045 C9orf116Q5BN46 136 aaPredicted RBP11.19□□□□□ -0.62
RHBDF1-209ENST00000486045 LPAP08519 4548 aa11.19□□□□□ -0.62
RHBDF1-209ENST00000486045 RPL18AQ02543 176 aaKnown RBP11.18□□□□□ -0.62
RHBDF1-209ENST00000486045 C2orf82Q6UX34 121 aa11.18□□□□□ -0.62
RHBDF1-209ENST00000486045 UNQ6190/PRO20217Q6UXQ8 127 aa11.18□□□□□ -0.62
RHBDF1-209ENST00000486045 C10orf25Q5T742 122 aa11.17□□□□□ -0.62
RHBDF1-209ENST00000486045 PHF5AQ7RTV0 110 aaKnown RBP11.17□□□□□ -0.62
RHBDF1-209ENST00000486045 CXCL5P42830 114 aa11.16□□□□□ -0.62
RHBDF1-209ENST00000486045 HERVK_113P61574 105 aa11.16□□□□□ -0.62
RHBDF1-209ENST00000486045 RNF151Q2KHN1 245 aa11.16□□□□□ -0.62
RHBDF1-209ENST00000486045 C1orf137Q5JT78 98 aa11.15□□□□□ -0.62
RHBDF1-209ENST00000486045 LEPROTO15243 131 aa11.14□□□□□ -0.63
RHBDF1-209ENST00000486045 SCGB1D1O95968 90 aa11.14□□□□□ -0.63
RHBDF1-209ENST00000486045 TRBV30A0A0K0K1B3 111 aa11.13□□□□□ -0.63
RHBDF1-209ENST00000486045 ATOH7Q8N100 152 aa11.13□□□□□ -0.63
RHBDF1-209ENST00000486045 PLEKHB2Q96CS7 222 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms