RNA–Protein interactions for RNA: ENST00000485749.1

RTN4-213, Transcript of reticulon 4, humanhuman

TSL 2

Gene RTN4, Length 832 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-213ENST00000485749 LINC01546A6NGU7 62 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 WT1-ASQ06250 92 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 KRTAP25-1Q3LHN0 102 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 LINC00322Q6ZN03 302 aaPredicted RBP2.77□□□□□ -1.97
RTN4-213ENST00000485749 LEAP2Q969E1 77 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 UBL5Q9BZL1 73 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 ALPK2Q86TB3 2170 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 SHANK1Q9Y566 2161 aa2.77□□□□□ -1.97
RTN4-213ENST00000485749 GOLGA4Q13439 2230 aaKnown RBP2.76□□□□□ -1.97
RTN4-213ENST00000485749 DNAH12Q6ZR08 3092 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 K7EMI3 77 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 M0R3E3 92 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 GAFA1Q96PS6 74 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 TDRD6O60522 2096 aaKnown RBP2.76□□□□□ -1.97
RTN4-213ENST00000485749 SVILO95425 2214 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 ZNF407Q9C0G0 2248 aa2.76□□□□□ -1.97
RTN4-213ENST00000485749 CLPSL1A2RUU4 121 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 H3BRN7 92 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 MGPP08493 103 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 KRTAP10-12P60413 245 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 NREPQ16612 68 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 COX7B2Q8TF08 81 aa2.75□□□□□ -1.97
RTN4-213ENST00000485749 UQCR11O14957 56 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 IGKV1-17P01599 117 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 C10orf55Q5SWW7 151 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 HCP5Q6MZN7 132 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 DEFB108BQ8NET1 73 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 CNFNQ9BYD5 112 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 CENPFP49454 3210 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 MUC4Q99102 2169 aa2.74□□□□□ -1.97
RTN4-213ENST00000485749 IGKV3-7A0A075B6H7 116 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 LRCOL1A6NCL2 159 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 I3L2K1 104 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 CTSGP08311 255 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 CCL3L1P16619 93 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 CRIP1P50238 77 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 CNBPP62633 177 aaKnown RBP2.73□□□□□ -1.97
RTN4-213ENST00000485749 SPINT4Q6UDR6 99 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 C9orf163Q8N9P6 203 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 PRR34Q9NV39 138 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 LINC01558Q9Y6Z2 57 aa2.73□□□□□ -1.97
RTN4-213ENST00000485749 NCOA6Q14686 2063 aaPredicted RBP2.73□□□□□ -1.97
RTN4-213ENST00000485749 HTTP42858 3142 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 CCL18P55774 89 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 Q6ZTI0 123 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 WFDC9Q8NEX5 89 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 TMEM263Q8WUH6 116 aaKnown RBP2.72□□□□□ -1.97
RTN4-213ENST00000485749 LINC00208Q96KT6 92 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 MED13Q9UHV7 2174 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 PSORS1C2Q9UIG4 136 aa2.72□□□□□ -1.97
RTN4-213ENST00000485749 KIAA1549Q9HCM3 1950 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 F5P12259 2224 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 TRAV40A0A0B4J280 105 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 H0Y9P7 68 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 K7EIM0 57 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 NDUFA3O95167 84 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 ENHOQ6UWT2 76 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 LINC00846Q9NV44 126 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 KAAG1Q9UBP8 84 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 DOCK11Q5JSL3 2073 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 CEP350Q5VT06 3117 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 PCNX2A6NKB5 2137 aa2.71□□□□□ -1.98
RTN4-213ENST00000485749 NACAE9PAV3 2078 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 IGKV2-40A0A087WW87 121 aaPredicted RBP2.7□□□□□ -1.98
RTN4-213ENST00000485749 TRAV21A0A0B4J279 112 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 A0A1W2PNU3 283 aaPredicted RBP2.7□□□□□ -1.98
RTN4-213ENST00000485749 JMJD7-PLA2G4BH0Y9G9 81 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 ZNF861PO60384 105 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 IGKV2D-40P01614 121 aaPredicted RBP2.7□□□□□ -1.98
RTN4-213ENST00000485749 LY6EQ16553 131 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 LINC00612Q8N6U2 182 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 SMIM2Q9BVW6 85 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 KLK9Q9UKQ9 250 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 PDE4DIPQ5VU43 2346 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 UTRNP46939 3433 aa2.7□□□□□ -1.98
RTN4-213ENST00000485749 MYO7AQ13402 2215 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 APELAP0DMC3 54 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 PDE6GP18545 87 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 COX17Q14061 63 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 MYO7BQ6PIF6 2116 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 PCDH15Q96QU1 1955 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 AGRNO00468 2067 aa2.69□□□□□ -1.98
RTN4-213ENST00000485749 RP1P56715 2156 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 CEP192Q8TEP8 1941 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 TRBV6-4A0A1B0GX49 114 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 DSCR10P59022 87 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 WFDC10AQ9H1F0 79 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 PRO2289Q9P1D8 64 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 CUL9Q8IWT3 2517 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 SPAG17Q6Q759 2223 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 GTF3C1Q12789 2109 aa2.68□□□□□ -1.98
RTN4-213ENST00000485749 M0R1W7 72 aa2.67□□□□□ -1.98
RTN4-213ENST00000485749 RNASE3P12724 160 aaKnown RBP2.67□□□□□ -1.98
RTN4-213ENST00000485749 COX6B1P14854 86 aa2.67□□□□□ -1.98
RTN4-213ENST00000485749 R4GN34 69 aa2.67□□□□□ -1.98
RTN4-213ENST00000485749 A0A0C4DFX4 3053 aa2.67□□□□□ -1.98
RTN4-213ENST00000485749 ABCA7Q8IZY2 2146 aa2.66□□□□□ -1.98
RTN4-213ENST00000485749 SEC16AO15027 2179 aa2.66□□□□□ -1.98
RTN4-213ENST00000485749 IGKV3OR2-268A0A0C4DH90 116 aa2.66□□□□□ -1.98
RTN4-213ENST00000485749 MINOS1Q5TGZ0 78 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 172.7 ms