RNA–Protein interactions for RNA: ENST00000485705.5

RPUSD3-217, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 3

Gene RPUSD3, Length 630 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-217ENST00000485705 Q8IZM0 81 aa9.93□□□□□ -0.82
RPUSD3-217ENST00000485705 HIST3H2BBQ8N257 126 aa9.93□□□□□ -0.82
RPUSD3-217ENST00000485705 IGLV5-39A0A0G2JS06 123 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 PANO1I0J062 215 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 CHTF8P0CG12 524 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 XGP55808 180 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 C6orf226Q5I0X4 101 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 Q6ZSA8 131 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 COX7B2Q8TF08 81 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 C6orf48Q9UBA6 75 aa9.92□□□□□ -0.82
RPUSD3-217ENST00000485705 F8WDY8 70 aa9.91□□□□□ -0.82
RPUSD3-217ENST00000485705 S100A6P06703 90 aa9.91□□□□□ -0.82
RPUSD3-217ENST00000485705 C3orf79P0CE67 100 aa9.91□□□□□ -0.82
RPUSD3-217ENST00000485705 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.91□□□□□ -0.82
RPUSD3-217ENST00000485705 FAT1Q14517 4588 aa9.9□□□□□ -0.82
RPUSD3-217ENST00000485705 TMEM223A0PJW6 202 aa9.9□□□□□ -0.82
RPUSD3-217ENST00000485705 CDK2AP2O75956 126 aa9.9□□□□□ -0.82
RPUSD3-217ENST00000485705 DPM2O94777 84 aa9.89□□□□□ -0.83
RPUSD3-217ENST00000485705 KRTDAPP60985 99 aa9.89□□□□□ -0.83
RPUSD3-217ENST00000485705 CKS1BP61024 79 aa9.89□□□□□ -0.83
RPUSD3-217ENST00000485705 SNRPEP62304 92 aaKnown RBP9.89□□□□□ -0.83
RPUSD3-217ENST00000485705 C9orf116Q5BN46 136 aaPredicted RBP9.89□□□□□ -0.83
RPUSD3-217ENST00000485705 A0A096LNI7 61 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 IGKCP01834 107 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 PLNP26678 52 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 RNF151Q2KHN1 245 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 LINC01545Q5VT33 79 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 PET117Q6UWS5 81 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 HIST1H2BLQ99880 126 aa9.88□□□□□ -0.83
RPUSD3-217ENST00000485705 IGKV2-24A0A0C4DH68 120 aa9.87□□□□□ -0.83
RPUSD3-217ENST00000485705 S100A2P29034 98 aa9.87□□□□□ -0.83
RPUSD3-217ENST00000485705 SCXQ7RTU7 201 aa9.87□□□□□ -0.83
RPUSD3-217ENST00000485705 TRBV30A0A0K0K1B3 111 aa9.86□□□□□ -0.83
RPUSD3-217ENST00000485705 LOC107984640A0A0U1RRK4 108 aa9.86□□□□□ -0.83
RPUSD3-217ENST00000485705 C5orf52A6NGY3 159 aa9.86□□□□□ -0.83
RPUSD3-217ENST00000485705 GAGE2BQ13066 116 aa9.86□□□□□ -0.83
RPUSD3-217ENST00000485705 CXCL5P42830 114 aa9.85□□□□□ -0.83
RPUSD3-217ENST00000485705 RPL18AQ02543 176 aaKnown RBP9.85□□□□□ -0.83
RPUSD3-217ENST00000485705 CIRBPQ14011 172 aaKnown RBP9.85□□□□□ -0.83
RPUSD3-217ENST00000485705 CIRBP-AS1Q8TBR5 109 aa9.85□□□□□ -0.83
RPUSD3-217ENST00000485705 SPACA4Q8TDM5 124 aa9.85□□□□□ -0.83
RPUSD3-217ENST00000485705 PTTG1IPP53801 180 aa9.84□□□□□ -0.83
RPUSD3-217ENST00000485705 MAJINQ3KP22 176 aa9.84□□□□□ -0.83
RPUSD3-217ENST00000485705 TLX1NBP0CAT3 122 aa9.83□□□□□ -0.84
RPUSD3-217ENST00000485705 Q6ZRP5 223 aa9.83□□□□□ -0.84
RPUSD3-217ENST00000485705 DPH3Q96FX2 82 aa9.83□□□□□ -0.84
RPUSD3-217ENST00000485705 A0A087WYN8 130 aa9.82□□□□□ -0.84
RPUSD3-217ENST00000485705 SMR3BP02814 79 aaPredicted RBP9.82□□□□□ -0.84
RPUSD3-217ENST00000485705 TSPEAR-AS2P59090 65 aa9.82□□□□□ -0.84
RPUSD3-217ENST00000485705 PKIGQ9Y2B9 76 aa9.82□□□□□ -0.84
RPUSD3-217ENST00000485705 GAGE2EQ4V326 116 aa9.81□□□□□ -0.84
RPUSD3-217ENST00000485705 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
RPUSD3-217ENST00000485705 GAGE2DQ9UEU5 116 aa9.81□□□□□ -0.84
RPUSD3-217ENST00000485705 NDUFC2-KCTD14E9PQ53 114 aa9.8□□□□□ -0.84
RPUSD3-217ENST00000485705 LEPROTO15243 131 aa9.8□□□□□ -0.84
RPUSD3-217ENST00000485705 HERVK_113P61574 105 aa9.8□□□□□ -0.84
RPUSD3-217ENST00000485705 LINC00518Q8N0U6 118 aa9.8□□□□□ -0.84
RPUSD3-217ENST00000485705 STPG4Q8N801 248 aa9.8□□□□□ -0.84
RPUSD3-217ENST00000485705 VPS13BQ7Z7G8 4022 aa9.79□□□□□ -0.84
RPUSD3-217ENST00000485705 C20orf202A1L168 122 aa9.79□□□□□ -0.84
RPUSD3-217ENST00000485705 LINC00474Q9P2X8 69 aa9.79□□□□□ -0.84
RPUSD3-217ENST00000485705 A0A1W2PNN7 141 aa9.78□□□□□ -0.84
RPUSD3-217ENST00000485705 ATOH7Q8N100 152 aa9.78□□□□□ -0.84
RPUSD3-217ENST00000485705 PLEKHB2Q96CS7 222 aa9.78□□□□□ -0.84
RPUSD3-217ENST00000485705 PLAC8Q9NZF1 115 aa9.78□□□□□ -0.84
RPUSD3-217ENST00000485705 ABCA13Q86UQ4 5058 aa9.77□□□□□ -0.84
RPUSD3-217ENST00000485705 E9PLD3 99 aa9.77□□□□□ -0.85
RPUSD3-217ENST00000485705 J3QQQ9 107 aa9.77□□□□□ -0.85
RPUSD3-217ENST00000485705 PFN2P35080 140 aa9.77□□□□□ -0.85
RPUSD3-217ENST00000485705 C9orf129Q5T035 196 aaKnown RBP9.77□□□□□ -0.85
RPUSD3-217ENST00000485705 NDUFA12Q9UI09 145 aa9.77□□□□□ -0.85
RPUSD3-217ENST00000485705 FAM168BA1KXE4 195 aa9.76□□□□□ -0.85
RPUSD3-217ENST00000485705 AKR1D1P51857 326 aa9.76□□□□□ -0.85
RPUSD3-217ENST00000485705 XAGE1AQ9HD64 81 aa9.76□□□□□ -0.85
RPUSD3-217ENST00000485705 ERG28Q9UKR5 140 aa9.76□□□□□ -0.85
RPUSD3-217ENST00000485705 SMIM6P0DI80 62 aa9.75□□□□□ -0.85
RPUSD3-217ENST00000485705 IGKV2D-26A0A0A0MRZ7 120 aa9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 LGALS3P17931 250 aaKnown RBP9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 ANKRD39Q53RE8 183 aa9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 SFTA2Q6UW10 78 aa9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 KRTAP7-1Q8IUC3 87 aa9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 Q8N1X5 172 aa9.74□□□□□ -0.85
RPUSD3-217ENST00000485705 A0A0U1RRA0 63 aa9.73□□□□□ -0.85
RPUSD3-217ENST00000485705 MYMXA0A1B0GTQ4 84 aa9.73□□□□□ -0.85
RPUSD3-217ENST00000485705 EPM2AB3EWF7 344 aa9.73□□□□□ -0.85
RPUSD3-217ENST00000485705 LINC00528Q8N1L1 170 aa9.73□□□□□ -0.85
RPUSD3-217ENST00000485705 KRTAP4-5Q9BYR2 181 aa9.73□□□□□ -0.85
RPUSD3-217ENST00000485705 HERV-K104P63124 156 aa9.72□□□□□ -0.85
RPUSD3-217ENST00000485705 SMIM13P0DJ93 91 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 LINC00158P58513 81 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 COX17Q14061 63 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 MEIG1Q5JSS6 88 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 SERTAD4-AS1Q5TG53 156 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 FAM19A5Q7Z5A7 132 aaPredicted RBP9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 TTTY13Q9BZ97 58 aa9.71□□□□□ -0.86
RPUSD3-217ENST00000485705 SCGB1D1O95968 90 aa9.7□□□□□ -0.86
RPUSD3-217ENST00000485705 NMUP48645 174 aa9.7□□□□□ -0.86
RPUSD3-217ENST00000485705 Q5VSD8 79 aa9.7□□□□□ -0.86
RPUSD3-217ENST00000485705 C12orf57Q99622 126 aa9.7□□□□□ -0.86
RPUSD3-217ENST00000485705 SND1-IT1Q9HBX3 110 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms