RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 PMCHL2Q9BQD1 86 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 PKIGQ9Y2B9 76 aa12.8□□□□□ -0.36
COL6A2-208ENST00000485591 LRP1BQ9NZR2 4599 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 TMEM223A0PJW6 202 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 CDK2AP2O75956 126 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 CKS1BP61024 79 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 C10orf25Q5T742 122 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 LINC01545Q5VT33 79 aa12.79□□□□□ -0.36
COL6A2-208ENST00000485591 TRBV30A0A0K0K1B3 111 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 IGKCP01834 107 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 KRTDAPP60985 99 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 SNRPEP62304 92 aaKnown RBP12.78□□□□□ -0.36
COL6A2-208ENST00000485591 HIST1H2BLQ99880 126 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 FAM30AQ9NZY2 134 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 C6orf48Q9UBA6 75 aa12.78□□□□□ -0.36
COL6A2-208ENST00000485591 C5orf52A6NGY3 159 aa12.77□□□□□ -0.37
COL6A2-208ENST00000485591 LOC107984640A0A0U1RRK4 108 aa12.75□□□□□ -0.37
COL6A2-208ENST00000485591 CIRBPQ14011 172 aaKnown RBP12.74□□□□□ -0.37
COL6A2-208ENST00000485591 TLX1NBP0CAT3 122 aa12.73□□□□□ -0.37
COL6A2-208ENST00000485591 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.73□□□□□ -0.37
COL6A2-208ENST00000485591 A0A096LNI7 61 aa12.72□□□□□ -0.37
COL6A2-208ENST00000485591 C20orf202A1L168 122 aa12.72□□□□□ -0.37
COL6A2-208ENST00000485591 PANO1I0J062 215 aa12.72□□□□□ -0.37
COL6A2-208ENST00000485591 XGP55808 180 aa12.72□□□□□ -0.37
COL6A2-208ENST00000485591 CHTF8P0CG12 524 aa12.71□□□□□ -0.37
COL6A2-208ENST00000485591 HERVK_113P61574 105 aa12.71□□□□□ -0.37
COL6A2-208ENST00000485591 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
COL6A2-208ENST00000485591 SPACA4Q8TDM5 124 aa12.71□□□□□ -0.37
COL6A2-208ENST00000485591 LINC00474Q9P2X8 69 aa12.7□□□□□ -0.38
COL6A2-208ENST00000485591 IGKV2-24A0A0C4DH68 120 aa12.69□□□□□ -0.38
COL6A2-208ENST00000485591 PTTG1IPP53801 180 aa12.69□□□□□ -0.38
COL6A2-208ENST00000485591 RPL18AQ02543 176 aaKnown RBP12.69□□□□□ -0.38
COL6A2-208ENST00000485591 C9orf116Q5BN46 136 aaPredicted RBP12.69□□□□□ -0.38
COL6A2-208ENST00000485591 SCXQ7RTU7 201 aa12.69□□□□□ -0.38
COL6A2-208ENST00000485591 NDUFC2-KCTD14E9PQ53 114 aa12.68□□□□□ -0.38
COL6A2-208ENST00000485591 HAMPP81172 84 aa12.68□□□□□ -0.38
COL6A2-208ENST00000485591 GAGE2BQ13066 116 aa12.68□□□□□ -0.38
COL6A2-208ENST00000485591 DNAH8Q96JB1 4490 aa12.68□□□□□ -0.38
COL6A2-208ENST00000485591 APOBP04114 4563 aaKnown RBP12.67□□□□□ -0.38
COL6A2-208ENST00000485591 KIAA1109Q2LD37 5005 aa12.67□□□□□ -0.38
COL6A2-208ENST00000485591 LEPROTO15243 131 aa12.67□□□□□ -0.38
COL6A2-208ENST00000485591 AKR1D1P51857 326 aa12.67□□□□□ -0.38
COL6A2-208ENST00000485591 Q6ZRP5 223 aa12.67□□□□□ -0.38
COL6A2-208ENST00000485591 PLEKHB2Q96CS7 222 aa12.67□□□□□ -0.38
COL6A2-208ENST00000485591 ZNF625Q96I27 306 aaPredicted RBP12.67□□□□□ -0.38
COL6A2-208ENST00000485591 MAJINQ3KP22 176 aa12.66□□□□□ -0.38
COL6A2-208ENST00000485591 CIRBP-AS1Q8TBR5 109 aa12.66□□□□□ -0.38
COL6A2-208ENST00000485591 E9PLD3 99 aa12.65□□□□□ -0.38
COL6A2-208ENST00000485591 TMA7Q9Y2S6 64 aaKnown RBP12.65□□□□□ -0.38
COL6A2-208ENST00000485591 TSPEAR-AS2P59090 65 aa12.64□□□□□ -0.39
COL6A2-208ENST00000485591 RYR1P21817 5038 aa12.63□□□□□ -0.39
COL6A2-208ENST00000485591 A0A087WYN8 130 aa12.63□□□□□ -0.39
COL6A2-208ENST00000485591 J3QQQ9 107 aa12.63□□□□□ -0.39
COL6A2-208ENST00000485591 DPH3Q96FX2 82 aa12.63□□□□□ -0.39
COL6A2-208ENST00000485591 GAGE2EQ4V326 116 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 STPG4Q8N801 248 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 PLAC8Q9NZF1 115 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 GAGE2DQ9UEU5 116 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 NDUFA12Q9UI09 145 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 ERG28Q9UKR5 140 aa12.62□□□□□ -0.39
COL6A2-208ENST00000485591 HERV-K104P63124 156 aa12.61□□□□□ -0.39
COL6A2-208ENST00000485591 MYMXA0A1B0GTQ4 84 aa12.6□□□□□ -0.39
COL6A2-208ENST00000485591 LGALS3P17931 250 aaKnown RBP12.6□□□□□ -0.39
COL6A2-208ENST00000485591 NMUP48645 174 aa12.6□□□□□ -0.39
COL6A2-208ENST00000485591 COX17Q14061 63 aa12.6□□□□□ -0.39
COL6A2-208ENST00000485591 ATOH7Q8N100 152 aa12.6□□□□□ -0.39
COL6A2-208ENST00000485591 PFN2P35080 140 aa12.58□□□□□ -0.4
COL6A2-208ENST00000485591 EPM2AB3EWF7 344 aa12.57□□□□□ -0.4
COL6A2-208ENST00000485591 C9orf129Q5T035 196 aaKnown RBP12.57□□□□□ -0.4
COL6A2-208ENST00000485591 HSPG2P98160 4391 aa12.57□□□□□ -0.4
COL6A2-208ENST00000485591 IGKV2D-26A0A0A0MRZ7 120 aa12.56□□□□□ -0.4
COL6A2-208ENST00000485591 A0A1W2PNN7 141 aa12.55□□□□□ -0.4
COL6A2-208ENST00000485591 SMR3BP02814 79 aaPredicted RBP12.55□□□□□ -0.4
COL6A2-208ENST00000485591 ANKRD39Q53RE8 183 aa12.55□□□□□ -0.4
COL6A2-208ENST00000485591 XAGE1AQ9HD64 81 aa12.55□□□□□ -0.4
COL6A2-208ENST00000485591 LINC00587B1AMM8 73 aa12.54□□□□□ -0.4
COL6A2-208ENST00000485591 SCGB1D1O95968 90 aa12.54□□□□□ -0.4
COL6A2-208ENST00000485591 MEIG1Q5JSS6 88 aa12.54□□□□□ -0.4
COL6A2-208ENST00000485591 Q8N1X5 172 aa12.54□□□□□ -0.4
COL6A2-208ENST00000485591 FAM168BA1KXE4 195 aa12.53□□□□□ -0.4
COL6A2-208ENST00000485591 SMIM13P0DJ93 91 aa12.52□□□□□ -0.41
COL6A2-208ENST00000485591 LINC00158P58513 81 aa12.52□□□□□ -0.41
COL6A2-208ENST00000485591 LINC00528Q8N1L1 170 aa12.52□□□□□ -0.41
COL6A2-208ENST00000485591 KRTAP17-1Q9BYP8 105 aa12.52□□□□□ -0.41
COL6A2-208ENST00000485591 SND1-IT1Q9HBX3 110 aa12.51□□□□□ -0.41
COL6A2-208ENST00000485591 FAM19A5Q7Z5A7 132 aaPredicted RBP12.5□□□□□ -0.41
COL6A2-208ENST00000485591 KRTAP7-1Q8IUC3 87 aa12.5□□□□□ -0.41
COL6A2-208ENST00000485591 HERC2O95714 4834 aa12.5□□□□□ -0.41
COL6A2-208ENST00000485591 A0A0J9YXY3 114 aa12.49□□□□□ -0.41
COL6A2-208ENST00000485591 A0A0U1RRA0 63 aa12.49□□□□□ -0.41
COL6A2-208ENST00000485591 ZNF815PA8K554 130 aa12.49□□□□□ -0.41
COL6A2-208ENST00000485591 HSBP1L1C9JCN9 74 aa12.49□□□□□ -0.41
COL6A2-208ENST00000485591 FAM229AH3BQW9 127 aa12.48□□□□□ -0.41
COL6A2-208ENST00000485591 JOSD1Q15040 202 aaPredicted RBP12.48□□□□□ -0.41
COL6A2-208ENST00000485591 SERTAD4-AS1Q5TG53 156 aa12.48□□□□□ -0.41
COL6A2-208ENST00000485591 TTTY13Q9BZ97 58 aa12.48□□□□□ -0.41
COL6A2-208ENST00000485591 PLA2G2DQ9UNK4 145 aa12.48□□□□□ -0.41
COL6A2-208ENST00000485591 Q5VSD8 79 aa12.47□□□□□ -0.41
COL6A2-208ENST00000485591 MIR7-3HGQ8N6C7 128 aa12.47□□□□□ -0.41
COL6A2-208ENST00000485591 C7orf33Q8WU49 177 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms