RNA–Protein interactions for RNA: ENST00000484874.2

CNKSR1-208, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

TSL 3

Gene CNKSR1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-208ENST00000484874 CHTF8P0CG12 524 aa11.5□□□□□ -0.57
CNKSR1-208ENST00000484874 C10orf25Q5T742 122 aa11.5□□□□□ -0.57
CNKSR1-208ENST00000484874 PLAC8Q9NZF1 115 aa11.5□□□□□ -0.57
CNKSR1-208ENST00000484874 A0A087WYN8 130 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 A0A096LNI7 61 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 TRBV30A0A0K0K1B3 111 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 ATP6V1G1O75348 118 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 LEPROTL1O95214 131 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 TLX1NBP0CAT3 122 aa11.49□□□□□ -0.57
CNKSR1-208ENST00000484874 PTTG1IPP53801 180 aa11.48□□□□□ -0.57
CNKSR1-208ENST00000484874 MAJINQ3KP22 176 aa11.48□□□□□ -0.57
CNKSR1-208ENST00000484874 TOMM7Q9P0U1 55 aa11.48□□□□□ -0.57
CNKSR1-208ENST00000484874 C6orf48Q9UBA6 75 aa11.48□□□□□ -0.57
CNKSR1-208ENST00000484874 CHTOPQ9Y3Y2 248 aaKnown RBP11.48□□□□□ -0.57
CNKSR1-208ENST00000484874 IGKV2-24A0A0C4DH68 120 aa11.47□□□□□ -0.57
CNKSR1-208ENST00000484874 CKS1BP61024 79 aa11.47□□□□□ -0.57
CNKSR1-208ENST00000484874 Q5VSD8 79 aa11.47□□□□□ -0.57
CNKSR1-208ENST00000484874 C2orf82Q6UX34 121 aa11.47□□□□□ -0.57
CNKSR1-208ENST00000484874 ZNF22P17026 224 aaPredicted RBP11.46□□□□□ -0.57
CNKSR1-208ENST00000484874 CXCL5P42830 114 aa11.46□□□□□ -0.57
CNKSR1-208ENST00000484874 LINC00528Q8N1L1 170 aa11.46□□□□□ -0.57
CNKSR1-208ENST00000484874 HSPB8Q9UJY1 196 aa11.46□□□□□ -0.57
CNKSR1-208ENST00000484874 IGLV5-39A0A0G2JS06 123 aa11.45□□□□□ -0.58
CNKSR1-208ENST00000484874 C11orf86A6NJI1 115 aa11.45□□□□□ -0.58
CNKSR1-208ENST00000484874 GAGE2BQ13066 116 aa11.45□□□□□ -0.58
CNKSR1-208ENST00000484874 COX7B2Q8TF08 81 aa11.45□□□□□ -0.58
CNKSR1-208ENST00000484874 FAT1Q14517 4588 aa11.44□□□□□ -0.58
CNKSR1-208ENST00000484874 F8VRH5 84 aa11.44□□□□□ -0.58
CNKSR1-208ENST00000484874 PLA2G1BP04054 148 aaKnown RBP11.44□□□□□ -0.58
CNKSR1-208ENST00000484874 SPINK8P0C7L1 97 aa11.44□□□□□ -0.58
CNKSR1-208ENST00000484874 STPG4Q8N801 248 aa11.44□□□□□ -0.58
CNKSR1-208ENST00000484874 COA6Q5JTJ3 125 aaKnown RBP11.43□□□□□ -0.58
CNKSR1-208ENST00000484874 NDUFC2-KCTD14E9PQ53 114 aa11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 FABP4P15090 132 aa11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 RPL18AQ02543 176 aaKnown RBP11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 ODF1Q14990 250 aa11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 TMEM170BQ5T4T1 132 aa11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 Q6ZRP5 223 aa11.41□□□□□ -0.58
CNKSR1-208ENST00000484874 C9orf116Q5BN46 136 aaPredicted RBP11.39□□□□□ -0.59
CNKSR1-208ENST00000484874 SRRM2Q9UQ35 2752 aaKnown RBP11.38□□□□□ -0.59
CNKSR1-208ENST00000484874 A0A1W2PNN7 141 aa11.38□□□□□ -0.59
CNKSR1-208ENST00000484874 TMEM223A0PJW6 202 aa11.38□□□□□ -0.59
CNKSR1-208ENST00000484874 MAP1LC3CQ9BXW4 147 aa11.38□□□□□ -0.59
CNKSR1-208ENST00000484874 KRTAP10-4P60372 401 aaPredicted RBP11.36□□□□□ -0.59
CNKSR1-208ENST00000484874 SFTA2Q6UW10 78 aa11.36□□□□□ -0.59
CNKSR1-208ENST00000484874 C7orf33Q8WU49 177 aa11.36□□□□□ -0.59
CNKSR1-208ENST00000484874 H0Y8G0 127 aa11.35□□□□□ -0.59
CNKSR1-208ENST00000484874 PLNP26678 52 aa11.35□□□□□ -0.59
CNKSR1-208ENST00000484874 GAGE2EQ4V326 116 aa11.35□□□□□ -0.59
CNKSR1-208ENST00000484874 GAGE2DQ9UEU5 116 aa11.35□□□□□ -0.59
CNKSR1-208ENST00000484874 VPS13BQ7Z7G8 4022 aa11.35□□□□□ -0.59
CNKSR1-208ENST00000484874 INAFM2P0DMQ5 153 aa11.34□□□□□ -0.59
CNKSR1-208ENST00000484874 RPL37AP61513 92 aaKnown RBP11.34□□□□□ -0.59
CNKSR1-208ENST00000484874 DPM2O94777 84 aa11.33□□□□□ -0.6
CNKSR1-208ENST00000484874 SYS1-DBNDD2H3BUS1 97 aa11.32□□□□□ -0.6
CNKSR1-208ENST00000484874 COX17Q14061 63 aa11.31□□□□□ -0.6
CNKSR1-208ENST00000484874 C9orf129Q5T035 196 aaKnown RBP11.31□□□□□ -0.6
CNKSR1-208ENST00000484874 ZNF625Q96I27 306 aaPredicted RBP11.31□□□□□ -0.6
CNKSR1-208ENST00000484874 IGKCP01834 107 aa11.3□□□□□ -0.6
CNKSR1-208ENST00000484874 PET117Q6UWS5 81 aa11.29□□□□□ -0.6
CNKSR1-208ENST00000484874 FAM168BA1KXE4 195 aa11.28□□□□□ -0.6
CNKSR1-208ENST00000484874 KRTAP7-1Q8IUC3 87 aa11.28□□□□□ -0.6
CNKSR1-208ENST00000484874 LINC01545Q5VT33 79 aa11.27□□□□□ -0.61
CNKSR1-208ENST00000484874 PMCHL2Q9BQD1 86 aa11.27□□□□□ -0.61
CNKSR1-208ENST00000484874 ERG28Q9UKR5 140 aa11.27□□□□□ -0.61
CNKSR1-208ENST00000484874 LEPROTO15243 131 aa11.26□□□□□ -0.61
CNKSR1-208ENST00000484874 PLEKHB2Q96CS7 222 aa11.26□□□□□ -0.61
CNKSR1-208ENST00000484874 XAGE1AQ9HD64 81 aa11.26□□□□□ -0.61
CNKSR1-208ENST00000484874 PLA2G2DQ9UNK4 145 aa11.26□□□□□ -0.61
CNKSR1-208ENST00000484874 ABCA13Q86UQ4 5058 aa11.26□□□□□ -0.61
CNKSR1-208ENST00000484874 C3orf79P0CE67 100 aa11.25□□□□□ -0.61
CNKSR1-208ENST00000484874 HERVK_113P61574 105 aa11.25□□□□□ -0.61
CNKSR1-208ENST00000484874 HERV-K104P63124 156 aa11.25□□□□□ -0.61
CNKSR1-208ENST00000484874 PHF5AQ7RTV0 110 aaKnown RBP11.25□□□□□ -0.61
CNKSR1-208ENST00000484874 PFN2P35080 140 aa11.24□□□□□ -0.61
CNKSR1-208ENST00000484874 FAM19A5Q7Z5A7 132 aaPredicted RBP11.24□□□□□ -0.61
CNKSR1-208ENST00000484874 PCLOQ9Y6V0 5065 aa11.23□□□□□ -0.61
CNKSR1-208ENST00000484874 LINC00587B1AMM8 73 aa11.23□□□□□ -0.61
CNKSR1-208ENST00000484874 PRR3P79522 188 aaKnown RBP11.23□□□□□ -0.61
CNKSR1-208ENST00000484874 NDUFA12Q9UI09 145 aa11.23□□□□□ -0.61
CNKSR1-208ENST00000484874 MYMXA0A1B0GTQ4 84 aa11.22□□□□□ -0.61
CNKSR1-208ENST00000484874 TP73-AS1Q9UF72 201 aa11.22□□□□□ -0.61
CNKSR1-208ENST00000484874 J3QQQ9 107 aa11.21□□□□□ -0.61
CNKSR1-208ENST00000484874 M0QXV9 152 aa11.21□□□□□ -0.61
CNKSR1-208ENST00000484874 SERTAD4-AS1Q5TG53 156 aa11.21□□□□□ -0.61
CNKSR1-208ENST00000484874 C22orf24Q9Y442 160 aa11.21□□□□□ -0.61
CNKSR1-208ENST00000484874 E9PLD3 99 aa11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 NMUP48645 174 aa11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 KRTDAPP60985 99 aa11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 LBHQ53QV2 105 aaPredicted RBP11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 HIST3H2BBQ8N257 126 aa11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 SND1-IT1Q9HBX3 110 aa11.2□□□□□ -0.62
CNKSR1-208ENST00000484874 FLG2Q5D862 2391 aaPredicted RBP11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 IGLV5-37A0A075B6J1 123 aa11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 S100A6P06703 90 aa11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 HNRNPA3P51991 378 aaKnown RBP11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 LINC00158P58513 81 aa11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 PSORS1C2Q9UIG4 136 aa11.19□□□□□ -0.62
CNKSR1-208ENST00000484874 AKR1D1P51857 326 aa11.18□□□□□ -0.62
CNKSR1-208ENST00000484874 TSPEAR-AS2P59090 65 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms