RNA–Protein interactions for RNA: ENST00000484620.1

PDLIM4-207, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-207ENST00000484620 C2orf82Q6UX34 121 aa12.35□□□□□ -0.43
PDLIM4-207ENST00000484620 C9orf163Q8N9P6 203 aa12.35□□□□□ -0.43
PDLIM4-207ENST00000484620 DNAH11Q96DT5 4516 aa12.34□□□□□ -0.43
PDLIM4-207ENST00000484620 E9PLD3 99 aa12.34□□□□□ -0.43
PDLIM4-207ENST00000484620 UNQ6190/PRO20217Q6UXQ8 127 aa12.34□□□□□ -0.43
PDLIM4-207ENST00000484620 STPG4Q8N801 248 aa12.34□□□□□ -0.43
PDLIM4-207ENST00000484620 PKIGQ9Y2B9 76 aa12.34□□□□□ -0.43
PDLIM4-207ENST00000484620 TRBV30A0A0K0K1B3 111 aa12.33□□□□□ -0.44
PDLIM4-207ENST00000484620 HSBP1L1C9JCN9 74 aa12.33□□□□□ -0.44
PDLIM4-207ENST00000484620 JOSD1Q15040 202 aaPredicted RBP12.33□□□□□ -0.44
PDLIM4-207ENST00000484620 RNF151Q2KHN1 245 aa12.33□□□□□ -0.44
PDLIM4-207ENST00000484620 PKD1P98161 4303 aa12.33□□□□□ -0.44
PDLIM4-207ENST00000484620 J3QQQ9 107 aa12.32□□□□□ -0.44
PDLIM4-207ENST00000484620 LGALS3P17931 250 aaKnown RBP12.32□□□□□ -0.44
PDLIM4-207ENST00000484620 GCSHP23434 173 aa12.32□□□□□ -0.44
PDLIM4-207ENST00000484620 C10orf25Q5T742 122 aa12.32□□□□□ -0.44
PDLIM4-207ENST00000484620 C16orf90A8MZG2 172 aa12.31□□□□□ -0.44
PDLIM4-207ENST00000484620 C6orf48Q9UBA6 75 aa12.31□□□□□ -0.44
PDLIM4-207ENST00000484620 NMUP48645 174 aa12.29□□□□□ -0.44
PDLIM4-207ENST00000484620 TSPEAR-AS2P59090 65 aa12.29□□□□□ -0.44
PDLIM4-207ENST00000484620 LINC01620Q4KN68 170 aa12.29□□□□□ -0.44
PDLIM4-207ENST00000484620 NDUFA12Q9UI09 145 aa12.29□□□□□ -0.44
PDLIM4-207ENST00000484620 HECTD4Q9Y4D8 3996 aa12.28□□□□□ -0.44
PDLIM4-207ENST00000484620 MYMXA0A1B0GTQ4 84 aa12.28□□□□□ -0.44
PDLIM4-207ENST00000484620 ZNF625Q96I27 306 aaPredicted RBP12.28□□□□□ -0.44
PDLIM4-207ENST00000484620 LOC107984640A0A0U1RRK4 108 aa12.27□□□□□ -0.45
PDLIM4-207ENST00000484620 HERV-K104P63124 156 aa12.27□□□□□ -0.45
PDLIM4-207ENST00000484620 ANKRD39Q53RE8 183 aa12.27□□□□□ -0.45
PDLIM4-207ENST00000484620 IGKV2D-26A0A0A0MRZ7 120 aa12.25□□□□□ -0.45
PDLIM4-207ENST00000484620 MAJINQ3KP22 176 aa12.25□□□□□ -0.45
PDLIM4-207ENST00000484620 C9orf116Q5BN46 136 aaPredicted RBP12.25□□□□□ -0.45
PDLIM4-207ENST00000484620 PYY3Q5JQD4 70 aa12.25□□□□□ -0.45
PDLIM4-207ENST00000484620 SDIM1Q6ZPB5 146 aa12.25□□□□□ -0.45
PDLIM4-207ENST00000484620 TLX1NBP0CAT3 122 aa12.24□□□□□ -0.45
PDLIM4-207ENST00000484620 DNAH5Q8TE73 4624 aa12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 NDUFC2-KCTD14E9PQ53 114 aa12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 KRTAP10-1P60331 282 aa12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 RPL18AQ02543 176 aaKnown RBP12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 ERG28Q9UKR5 140 aa12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 EPPK1P58107 5090 aaKnown RBP12.23□□□□□ -0.45
PDLIM4-207ENST00000484620 LINC00587B1AMM8 73 aa12.22□□□□□ -0.45
PDLIM4-207ENST00000484620 COX17Q14061 63 aa12.22□□□□□ -0.45
PDLIM4-207ENST00000484620 MEIG1Q5JSS6 88 aa12.22□□□□□ -0.45
PDLIM4-207ENST00000484620 VAMP8Q9BV40 100 aa12.22□□□□□ -0.45
PDLIM4-207ENST00000484620 ZNF815PA8K554 130 aa12.21□□□□□ -0.45
PDLIM4-207ENST00000484620 GAGE2BQ13066 116 aa12.21□□□□□ -0.45
PDLIM4-207ENST00000484620 PFN2P35080 140 aa12.2□□□□□ -0.46
PDLIM4-207ENST00000484620 LINC00474Q9P2X8 69 aa12.2□□□□□ -0.46
PDLIM4-207ENST00000484620 A0A096LNI7 61 aa12.19□□□□□ -0.46
PDLIM4-207ENST00000484620 IGKV2-24A0A0C4DH68 120 aa12.19□□□□□ -0.46
PDLIM4-207ENST00000484620 PTTG1IPP53801 180 aa12.19□□□□□ -0.46
PDLIM4-207ENST00000484620 Q6ZRP5 223 aa12.19□□□□□ -0.46
PDLIM4-207ENST00000484620 PAM16Q9Y3D7 125 aa12.19□□□□□ -0.46
PDLIM4-207ENST00000484620 LINC00158P58513 81 aa12.18□□□□□ -0.46
PDLIM4-207ENST00000484620 GAGE2EQ4V326 116 aa12.18□□□□□ -0.46
PDLIM4-207ENST00000484620 SPATA45Q537H7 98 aa12.18□□□□□ -0.46
PDLIM4-207ENST00000484620 TTTY13Q9BZ97 58 aa12.18□□□□□ -0.46
PDLIM4-207ENST00000484620 GAGE2DQ9UEU5 116 aa12.18□□□□□ -0.46
PDLIM4-207ENST00000484620 PKHD1P08F94 4074 aa12.17□□□□□ -0.46
PDLIM4-207ENST00000484620 A0A0J9YXY3 114 aa12.17□□□□□ -0.46
PDLIM4-207ENST00000484620 LOC105371267A0A1B0GV96 52 aa12.17□□□□□ -0.46
PDLIM4-207ENST00000484620 CIRBPQ14011 172 aaKnown RBP12.17□□□□□ -0.46
PDLIM4-207ENST00000484620 PCP2Q8IVA1 136 aa12.17□□□□□ -0.46
PDLIM4-207ENST00000484620 CHTF8P0CG12 524 aa12.16□□□□□ -0.46
PDLIM4-207ENST00000484620 SMIM13P0DJ93 91 aa12.16□□□□□ -0.46
PDLIM4-207ENST00000484620 DPH3Q96FX2 82 aa12.16□□□□□ -0.46
PDLIM4-207ENST00000484620 A0A0U1RRA0 63 aa12.15□□□□□ -0.46
PDLIM4-207ENST00000484620 SCGB1D4Q6XE38 83 aa12.15□□□□□ -0.46
PDLIM4-207ENST00000484620 Q6ZSA8 131 aa12.15□□□□□ -0.46
PDLIM4-207ENST00000484620 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.15□□□□□ -0.46
PDLIM4-207ENST00000484620 DYNC1H1Q14204 4646 aaKnown RBP12.15□□□□□ -0.46
PDLIM4-207ENST00000484620 S100A12P80511 92 aa12.14□□□□□ -0.47
PDLIM4-207ENST00000484620 SPACA4Q8TDM5 124 aa12.14□□□□□ -0.47
PDLIM4-207ENST00000484620 SMIM6P0DI80 62 aa12.13□□□□□ -0.47
PDLIM4-207ENST00000484620 FAM30AQ9NZY2 134 aa12.13□□□□□ -0.47
PDLIM4-207ENST00000484620 TIMM17BO60830 172 aa12.12□□□□□ -0.47
PDLIM4-207ENST00000484620 COX8AP10176 69 aa12.12□□□□□ -0.47
PDLIM4-207ENST00000484620 XAGE1AQ9HD64 81 aa12.12□□□□□ -0.47
PDLIM4-207ENST00000484620 PANO1I0J062 215 aa12.11□□□□□ -0.47
PDLIM4-207ENST00000484620 MIR7-3HGQ8N6C7 128 aa12.11□□□□□ -0.47
PDLIM4-207ENST00000484620 SND1-IT1Q9HBX3 110 aa12.1□□□□□ -0.47
PDLIM4-207ENST00000484620 LRP1BQ9NZR2 4599 aa12.1□□□□□ -0.47
PDLIM4-207ENST00000484620 TMEM238C9JI98 176 aa12.09□□□□□ -0.47
PDLIM4-207ENST00000484620 C9orf129Q5T035 196 aaKnown RBP12.09□□□□□ -0.47
PDLIM4-207ENST00000484620 BOD1L2Q8IYS8 172 aa12.09□□□□□ -0.47
PDLIM4-207ENST00000484620 BIRC6Q9NR09 4857 aa12.08□□□□□ -0.48
PDLIM4-207ENST00000484620 A0A087WYN8 130 aa12.08□□□□□ -0.48
PDLIM4-207ENST00000484620 DLEU1O43261 78 aa12.08□□□□□ -0.48
PDLIM4-207ENST00000484620 C14orf144Q96I85 54 aa12.08□□□□□ -0.48
PDLIM4-207ENST00000484620 DNAH8Q96JB1 4490 aa12.08□□□□□ -0.48
PDLIM4-207ENST00000484620 SLC25A34Q6PIV7 304 aa12.07□□□□□ -0.48
PDLIM4-207ENST00000484620 SCXQ7RTU7 201 aa12.07□□□□□ -0.48
PDLIM4-207ENST00000484620 DAND5Q8N907 189 aa12.07□□□□□ -0.48
PDLIM4-207ENST00000484620 CIRBP-AS1Q8TBR5 109 aa12.06□□□□□ -0.48
PDLIM4-207ENST00000484620 LITAFQ99732 161 aa12.06□□□□□ -0.48
PDLIM4-207ENST00000484620 MIEN1Q9BRT3 115 aa12.06□□□□□ -0.48
PDLIM4-207ENST00000484620 PLAC8Q9NZF1 115 aa12.06□□□□□ -0.48
PDLIM4-207ENST00000484620 CDK2AP2O75956 126 aa12.05□□□□□ -0.48
PDLIM4-207ENST00000484620 ADAMTSL4-AS1Q5T5F5 129 aa12.05□□□□□ -0.48
PDLIM4-207ENST00000484620 FAM19A5Q7Z5A7 132 aaPredicted RBP12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms