RNA–Protein interactions for RNA: ENST00000484235.1

SMDT1-203, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

TSL 1 (best)

Gene SMDT1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-203ENST00000484235 GAGE2BQ13066 116 aa16.86■□□□□ 0.29
SMDT1-203ENST00000484235 Q8IZM0 81 aa16.86■□□□□ 0.29
SMDT1-203ENST00000484235 TOMM7Q9P0U1 55 aa16.86■□□□□ 0.29
SMDT1-203ENST00000484235 C2orf82Q6UX34 121 aa16.85■□□□□ 0.29
SMDT1-203ENST00000484235 C6orf48Q9UBA6 75 aa16.85■□□□□ 0.29
SMDT1-203ENST00000484235 IGLC3P0DOY3 106 aa16.84■□□□□ 0.29
SMDT1-203ENST00000484235 CKS1BP61024 79 aa16.84■□□□□ 0.29
SMDT1-203ENST00000484235 TRBV30A0A0K0K1B3 111 aa16.83■□□□□ 0.28
SMDT1-203ENST00000484235 SMIM1B2RUZ4 78 aa16.82■□□□□ 0.28
SMDT1-203ENST00000484235 TLX1NBP0CAT3 122 aa16.82■□□□□ 0.28
SMDT1-203ENST00000484235 RPL18AQ02543 176 aaKnown RBP16.82■□□□□ 0.28
SMDT1-203ENST00000484235 H3BRM9 83 aa16.81■□□□□ 0.28
SMDT1-203ENST00000484235 FAM19A2Q8N3H0 131 aa16.81■□□□□ 0.28
SMDT1-203ENST00000484235 IFI27L1Q96BM0 104 aa16.8■□□□□ 0.28
SMDT1-203ENST00000484235 SERF1AO75920 110 aa16.79■□□□□ 0.28
SMDT1-203ENST00000484235 SPINK8P0C7L1 97 aa16.78■□□□□ 0.28
SMDT1-203ENST00000484235 LINC00310P59036 64 aa16.78■□□□□ 0.28
SMDT1-203ENST00000484235 KRTAP10-4P60372 401 aaPredicted RBP16.78■□□□□ 0.28
SMDT1-203ENST00000484235 RPL37AP61513 92 aaKnown RBP16.78■□□□□ 0.28
SMDT1-203ENST00000484235 COX7B2Q8TF08 81 aa16.77■□□□□ 0.28
SMDT1-203ENST00000484235 TRAV12-1A0A0B4J245 112 aa16.76■□□□□ 0.27
SMDT1-203ENST00000484235 CXCL5P42830 114 aa16.76■□□□□ 0.27
SMDT1-203ENST00000484235 Q6ZRP5 223 aa16.76■□□□□ 0.27
SMDT1-203ENST00000484235 C7orf33Q8WU49 177 aa16.76■□□□□ 0.27
SMDT1-203ENST00000484235 F8VRH5 84 aa16.75■□□□□ 0.27
SMDT1-203ENST00000484235 CHTOPQ9Y3Y2 248 aaKnown RBP16.75■□□□□ 0.27
SMDT1-203ENST00000484235 NDUFC2-KCTD14E9PQ53 114 aa16.74■□□□□ 0.27
SMDT1-203ENST00000484235 ZNF22P17026 224 aaPredicted RBP16.74■□□□□ 0.27
SMDT1-203ENST00000484235 C9orf116Q5BN46 136 aaPredicted RBP16.74■□□□□ 0.27
SMDT1-203ENST00000484235 NUPR1O60356 82 aa16.73■□□□□ 0.27
SMDT1-203ENST00000484235 A0A1W2PNN7 141 aa16.72■□□□□ 0.27
SMDT1-203ENST00000484235 C11orf86A6NJI1 115 aa16.72■□□□□ 0.27
SMDT1-203ENST00000484235 LEPROTL1O95214 131 aa16.72■□□□□ 0.27
SMDT1-203ENST00000484235 IGLV5-39A0A0G2JS06 123 aa16.71■□□□□ 0.27
SMDT1-203ENST00000484235 GAGE2EQ4V326 116 aa16.71■□□□□ 0.27
SMDT1-203ENST00000484235 GAGE2DQ9UEU5 116 aa16.71■□□□□ 0.27
SMDT1-203ENST00000484235 HIST1H2BKO60814 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BJP06899 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BOP23527 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BBP33778 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BDP58876 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BCP62807 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST2H2BEQ16778 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.69■□□□□ 0.26
SMDT1-203ENST00000484235 TMEM170BQ5T4T1 132 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BHQ93079 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BNQ99877 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HIST1H2BMQ99879 126 aa16.69■□□□□ 0.26
SMDT1-203ENST00000484235 HSPB8Q9UJY1 196 aa16.68■□□□□ 0.26
SMDT1-203ENST00000484235 S100A1P23297 94 aa16.67■□□□□ 0.26
SMDT1-203ENST00000484235 FABP4P15090 132 aa16.64■□□□□ 0.25
SMDT1-203ENST00000484235 FAM168BA1KXE4 195 aa16.62■□□□□ 0.25
SMDT1-203ENST00000484235 ODF1Q14990 250 aa16.62■□□□□ 0.25
SMDT1-203ENST00000484235 H0Y8G0 127 aa16.61■□□□□ 0.25
SMDT1-203ENST00000484235 C9orf129Q5T035 196 aaKnown RBP16.61■□□□□ 0.25
SMDT1-203ENST00000484235 TMEM223A0PJW6 202 aa16.6■□□□□ 0.25
SMDT1-203ENST00000484235 PRR3P79522 188 aaKnown RBP16.58■□□□□ 0.24
SMDT1-203ENST00000484235 FAM19A5Q7Z5A7 132 aaPredicted RBP16.58■□□□□ 0.24
SMDT1-203ENST00000484235 ATP6V1G1O75348 118 aa16.57■□□□□ 0.24
SMDT1-203ENST00000484235 HNRNPA3P51991 378 aaKnown RBP16.57■□□□□ 0.24
SMDT1-203ENST00000484235 SFTA2Q6UW10 78 aa16.57■□□□□ 0.24
SMDT1-203ENST00000484235 PHF5AQ7RTV0 110 aaKnown RBP16.57■□□□□ 0.24
SMDT1-203ENST00000484235 KRTAP7-1Q8IUC3 87 aa16.56■□□□□ 0.24
SMDT1-203ENST00000484235 MAP1LC3CQ9BXW4 147 aa16.56■□□□□ 0.24
SMDT1-203ENST00000484235 XAGE1AQ9HD64 81 aa16.56■□□□□ 0.24
SMDT1-203ENST00000484235 PLNP26678 52 aa16.54■□□□□ 0.24
SMDT1-203ENST00000484235 J3QL48 77 aa16.53■□□□□ 0.24
SMDT1-203ENST00000484235 COA6Q5JTJ3 125 aaKnown RBP16.53■□□□□ 0.24
SMDT1-203ENST00000484235 PKHD1L1Q86WI1 4243 aa16.52■□□□□ 0.24
SMDT1-203ENST00000484235 ZNF625Q96I27 306 aaPredicted RBP16.52■□□□□ 0.24
SMDT1-203ENST00000484235 KRTAP29-1A8MX34 341 aaPredicted RBP16.51■□□□□ 0.23
SMDT1-203ENST00000484235 M0QXV9 152 aa16.51■□□□□ 0.23
SMDT1-203ENST00000484235 DPM2O94777 84 aa16.5■□□□□ 0.23
SMDT1-203ENST00000484235 PFN2P35080 140 aa16.5■□□□□ 0.23
SMDT1-203ENST00000484235 COX17Q14061 63 aa16.5■□□□□ 0.23
SMDT1-203ENST00000484235 ERG28Q9UKR5 140 aa16.5■□□□□ 0.23
SMDT1-203ENST00000484235 PSORS1C2Q9UIG4 136 aa16.49■□□□□ 0.23
SMDT1-203ENST00000484235 SERTAD4-AS1Q5TG53 156 aa16.48■□□□□ 0.23
SMDT1-203ENST00000484235 LRP1Q07954 4544 aaKnown RBP16.48■□□□□ 0.23
SMDT1-203ENST00000484235 IGKCP01834 107 aa16.47■□□□□ 0.23
SMDT1-203ENST00000484235 PMCHL2Q9BQD1 86 aa16.47■□□□□ 0.23
SMDT1-203ENST00000484235 HMCN2Q8NDA2 5059 aa16.47■□□□□ 0.23
SMDT1-203ENST00000484235 C22orf24Q9Y442 160 aa16.46■□□□□ 0.23
SMDT1-203ENST00000484235 SYS1-DBNDD2H3BUS1 97 aa16.45■□□□□ 0.22
SMDT1-203ENST00000484235 OXTP01178 125 aa16.45■□□□□ 0.22
SMDT1-203ENST00000484235 PLA2G2DQ9UNK4 145 aa16.45■□□□□ 0.22
SMDT1-203ENST00000484235 UBE2BP63146 152 aa16.43■□□□□ 0.22
SMDT1-203ENST00000484235 LBHQ53QV2 105 aaPredicted RBP16.43■□□□□ 0.22
SMDT1-203ENST00000484235 TP73-AS1Q9UF72 201 aa16.43■□□□□ 0.22
SMDT1-203ENST00000484235 C1orf137Q5JT78 98 aa16.42■□□□□ 0.22
SMDT1-203ENST00000484235 KRTAP11-1Q8IUC1 163 aa16.42■□□□□ 0.22
SMDT1-203ENST00000484235 LEPROTO15243 131 aa16.41■□□□□ 0.22
SMDT1-203ENST00000484235 HERVK_113P61574 105 aa16.41■□□□□ 0.22
SMDT1-203ENST00000484235 SRSF9Q13242 221 aaKnown RBP eCLIP16.41■□□□□ 0.22
SMDT1-203ENST00000484235 SPINK6Q6UWN8 80 aa16.41■□□□□ 0.22
SMDT1-203ENST00000484235 SND1-IT1Q9HBX3 110 aa16.41■□□□□ 0.22
SMDT1-203ENST00000484235 HERV-K104P63124 156 aa16.4■□□□□ 0.22
SMDT1-203ENST00000484235 PET117Q6UWS5 81 aa16.4■□□□□ 0.22
SMDT1-203ENST00000484235 PLEKHB2Q96CS7 222 aa16.4■□□□□ 0.22
SMDT1-203ENST00000484235 NDUFA12Q9UI09 145 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms