RNA–Protein interactions for RNA: ENST00000483690.1

MCF2-207, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

TSL 3

Gene MCF2, Length 752 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-207ENST00000483690 MYOZ3Q8TDC0 251 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 ST20Q9HBF5 79 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 SPENQ96T58 3664 aaKnown RBP1.45□□□□□ -2.18
MCF2-207ENST00000483690 CEP250Q9BV73 2442 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 DMXL1Q9Y485 3027 aa1.45□□□□□ -2.18
MCF2-207ENST00000483690 MYO9AB2RTY4 2548 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 MYO18BQ8IUG5 2567 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 TRBV7-7A0A0K0K1E9 115 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 RBAKDNA6NC62 111 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 K7EIL1 84 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 IGLC2P0DOY2 106 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 IGLC3P0DOY3 106 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 POLR2JP52435 117 aaKnown RBP1.44□□□□□ -2.18
MCF2-207ENST00000483690 ADIRFQ15847 76 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 ASB16-AS1Q495Z4 193 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 C12orf73Q69YU5 71 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 DEFB124Q8NES8 71 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 VSTM2AQ8TAG5 236 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 S100A16Q96FQ6 103 aaKnown RBP1.44□□□□□ -2.18
MCF2-207ENST00000483690 DSCR8Q96T75 97 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 CCL19Q99731 98 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 CACFD1Q9UGQ2 172 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 PATJQ8NI35 1801 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 BPTFQ12830 3046 aa1.44□□□□□ -2.18
MCF2-207ENST00000483690 AKAP9Q99996 3911 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 UBE2L5PA0A1B0GUS4 154 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 ADCYAP1P18509 176 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 PCBD1P61457 104 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 UBE2L3P68036 154 aaKnown RBP1.43□□□□□ -2.18
MCF2-207ENST00000483690 MIC13Q5XKP0 118 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 TSKUQ8WUA8 353 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 C20orf78Q9BR46 151 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 DPH3P1Q9H4G8 78 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 TMEM242Q9NWH2 141 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 WDFY3Q8IZQ1 3526 aa1.43□□□□□ -2.18
MCF2-207ENST00000483690 CREBBPQ92793 2442 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 PIEZO2Q9H5I5 2752 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 BSNQ9UPA5 3926 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 A0A087WWC5 75 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 A0A0D9SFI3 127 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 ATOX1O00244 68 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 GNGT2O14610 69 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 IGKCP01834 107 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 CBLN1P23435 193 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 BVES-AS1Q5T3Y7 98 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 CSAG1Q6PB30 78 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 ATP11AUNQ6ZP68 121 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 C5orf38Q86SI9 138 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 PPDPFLQ8WWR9 84 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 SMIM7Q9BQ49 75 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 PMCHL2Q9BQD1 86 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 SPCS1Q9Y6A9 102 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 SPTA1P02549 2419 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 C2CD3Q4AC94 2353 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 FRYQ5TBA9 3013 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 ITPR3Q14573 2671 aa1.42□□□□□ -2.18
MCF2-207ENST00000483690 LAMA1P25391 3075 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 ZNF469Q96JG9 3925 aaPredicted RBP1.41□□□□□ -2.18
MCF2-207ENST00000483690 IL5P05113 134 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 Q8N8P6 123 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 SPTSSAQ969W0 71 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 Q9Y3F1 56 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 SPEGQ15772 3267 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 IGF2RP11717 2491 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 SPTAN1Q13813 2472 aaKnown RBP1.41□□□□□ -2.18
MCF2-207ENST00000483690 UBR5O95071 2799 aaPredicted RBP1.41□□□□□ -2.18
MCF2-207ENST00000483690 TEX15Q9BXT5 2789 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 ZZEF1O43149 2961 aa1.41□□□□□ -2.18
MCF2-207ENST00000483690 ZNF236Q9UL36 1845 aa1.4□□□□□ -2.18
MCF2-207ENST00000483690 ASXL3Q9C0F0 2248 aa1.4□□□□□ -2.18
MCF2-207ENST00000483690 CEP295Q9C0D2 2601 aa1.4□□□□□ -2.18
MCF2-207ENST00000483690 DSPP15924 2871 aaKnown RBP1.4□□□□□ -2.19
MCF2-207ENST00000483690 TANC1Q9C0D5 1861 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 C7orf77A4D0Y5 90 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 SYS1-DBNDD2H3BUS1 97 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 J3QLW9 94 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 CKS2P33552 79 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 KRTDAPP60985 99 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 CCL8P80075 99 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 PMCHL1Q16048 86 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 ETDBQ3ZM63 59 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 COMMD6Q7Z4G1 85 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 C18orf32Q8TCD1 76 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 LINC01600Q96MT4 127 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 TRGV9Q99603 122 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 MGST2Q99735 147 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 F5P12259 2224 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 CELSR3Q9NYQ7 3312 aa1.4□□□□□ -2.19
MCF2-207ENST00000483690 IGSF10Q6WRI0 2623 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 FREM2Q5SZK8 3169 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 TENM4Q6N022 2769 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 NBEAQ8NFP9 2946 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 TRAV17A0A0B4J275 112 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 PIGBOS1A0A0B4J2F0 54 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 KANTRA0A1W2PQU2 76 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 hADV29S1A0JD25 119 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 H3BUT2 72 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 SIX6O95475 246 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 CCKP06307 115 aa1.39□□□□□ -2.19
MCF2-207ENST00000483690 PIPP12273 146 aaPredicted RBP1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms