RNA–Protein interactions for RNA: ENST00000483670.5

PDCD4-208, Transcript of programmed cell death 4, humanhuman

TSL 5

Gene PDCD4, Length 774 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-208ENST00000483670 C7orf33Q8WU49 177 aa16.32■□□□□ 0.2
PDCD4-208ENST00000483670 TOMM7Q9P0U1 55 aa16.32■□□□□ 0.2
PDCD4-208ENST00000483670 C6orf48Q9UBA6 75 aa16.32■□□□□ 0.2
PDCD4-208ENST00000483670 H3BRM9 83 aa16.31■□□□□ 0.2
PDCD4-208ENST00000483670 C10orf25Q5T742 122 aa16.31■□□□□ 0.2
PDCD4-208ENST00000483670 HSBP1O75506 76 aa16.3■□□□□ 0.2
PDCD4-208ENST00000483670 CXCL5P42830 114 aa16.3■□□□□ 0.2
PDCD4-208ENST00000483670 IGLC3P0DOY3 106 aa16.29■□□□□ 0.2
PDCD4-208ENST00000483670 SMIM1B2RUZ4 78 aa16.28■□□□□ 0.2
PDCD4-208ENST00000483670 C2orf82Q6UX34 121 aa16.28■□□□□ 0.2
PDCD4-208ENST00000483670 KRTAP10-4P60372 401 aaPredicted RBP16.27■□□□□ 0.2
PDCD4-208ENST00000483670 NDUFC2-KCTD14E9PQ53 114 aa16.24■□□□□ 0.19
PDCD4-208ENST00000483670 F8VRH5 84 aa16.24■□□□□ 0.19
PDCD4-208ENST00000483670 COX7B2Q8TF08 81 aa16.24■□□□□ 0.19
PDCD4-208ENST00000483670 Q6ZRP5 223 aa16.23■□□□□ 0.19
PDCD4-208ENST00000483670 IFI27L1Q96BM0 104 aa16.23■□□□□ 0.19
PDCD4-208ENST00000483670 TRAV12-1A0A0B4J245 112 aa16.21■□□□□ 0.19
PDCD4-208ENST00000483670 SPINK8P0C7L1 97 aa16.21■□□□□ 0.19
PDCD4-208ENST00000483670 C9orf116Q5BN46 136 aaPredicted RBP16.2■□□□□ 0.18
PDCD4-208ENST00000483670 CHTOPQ9Y3Y2 248 aaKnown RBP16.2■□□□□ 0.18
PDCD4-208ENST00000483670 FLG2Q5D862 2391 aaPredicted RBP16.19■□□□□ 0.18
PDCD4-208ENST00000483670 SERF1AO75920 110 aa16.19■□□□□ 0.18
PDCD4-208ENST00000483670 ZNF22P17026 224 aaPredicted RBP16.19■□□□□ 0.18
PDCD4-208ENST00000483670 GAGE2EQ4V326 116 aa16.19■□□□□ 0.18
PDCD4-208ENST00000483670 FAM19A2Q8N3H0 131 aa16.19■□□□□ 0.18
PDCD4-208ENST00000483670 GAGE2DQ9UEU5 116 aa16.19■□□□□ 0.18
PDCD4-208ENST00000483670 SCO1O75880 301 aa16.18■□□□□ 0.18
PDCD4-208ENST00000483670 A0A1W2PNN7 141 aa16.17■□□□□ 0.18
PDCD4-208ENST00000483670 IGLV5-39A0A0G2JS06 123 aa16.16■□□□□ 0.18
PDCD4-208ENST00000483670 LEPROTL1O95214 131 aa16.16■□□□□ 0.18
PDCD4-208ENST00000483670 C11orf86A6NJI1 115 aa16.15■□□□□ 0.18
PDCD4-208ENST00000483670 TMEM170BQ5T4T1 132 aa16.15■□□□□ 0.18
PDCD4-208ENST00000483670 LINC00310P59036 64 aa16.14■□□□□ 0.17
PDCD4-208ENST00000483670 HSPB8Q9UJY1 196 aa16.14■□□□□ 0.17
PDCD4-208ENST00000483670 MYCBP2O75592 4640 aa16.13■□□□□ 0.17
PDCD4-208ENST00000483670 SFTA2Q6UW10 78 aa16.12■□□□□ 0.17
PDCD4-208ENST00000483670 PRR3P79522 188 aaKnown RBP16.11■□□□□ 0.17
PDCD4-208ENST00000483670 HIST1H2BKO60814 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BJP06899 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BOP23527 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BBP33778 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BDP58876 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BCP62807 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST2H2BEQ16778 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST2H2BFQ5QNW6 126 aaPredicted RBP16.08■□□□□ 0.16
PDCD4-208ENST00000483670 C9orf129Q5T035 196 aaKnown RBP16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BHQ93079 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BNQ99877 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 HIST1H2BMQ99879 126 aa16.08■□□□□ 0.16
PDCD4-208ENST00000483670 FAM19A5Q7Z5A7 132 aaPredicted RBP16.07■□□□□ 0.16
PDCD4-208ENST00000483670 FAM168BA1KXE4 195 aa16.06■□□□□ 0.16
PDCD4-208ENST00000483670 KRTAP29-1A8MX34 341 aaPredicted RBP16.06■□□□□ 0.16
PDCD4-208ENST00000483670 NUPR1O60356 82 aa16.06■□□□□ 0.16
PDCD4-208ENST00000483670 PKHD1L1Q86WI1 4243 aa16.05■□□□□ 0.16
PDCD4-208ENST00000483670 HNRNPA3P51991 378 aaKnown RBP16.05■□□□□ 0.16
PDCD4-208ENST00000483670 ODF1Q14990 250 aa16.05■□□□□ 0.16
PDCD4-208ENST00000483670 PHF5AQ7RTV0 110 aaKnown RBP16.05■□□□□ 0.16
PDCD4-208ENST00000483670 DMBT1Q9UGM3 2413 aaPredicted RBP16.05■□□□□ 0.16
PDCD4-208ENST00000483670 TMEM223A0PJW6 202 aa16.04■□□□□ 0.16
PDCD4-208ENST00000483670 OXTP01178 125 aa16.04■□□□□ 0.16
PDCD4-208ENST00000483670 S100A1P23297 94 aa16.04■□□□□ 0.16
PDCD4-208ENST00000483670 H0Y8G0 127 aa16.03■□□□□ 0.16
PDCD4-208ENST00000483670 M0QXV9 152 aa16.03■□□□□ 0.16
PDCD4-208ENST00000483670 FABP4P15090 132 aa16.03■□□□□ 0.16
PDCD4-208ENST00000483670 PLNP26678 52 aa16.02■□□□□ 0.16
PDCD4-208ENST00000483670 COX17Q14061 63 aa16.02■□□□□ 0.16
PDCD4-208ENST00000483670 XAGE1AQ9HD64 81 aa16.02■□□□□ 0.16
PDCD4-208ENST00000483670 J3QL48 77 aa16.01■□□□□ 0.15
PDCD4-208ENST00000483670 MAP1LC3CQ9BXW4 147 aa16.01■□□□□ 0.15
PDCD4-208ENST00000483670 KRTAP7-1Q8IUC3 87 aa15.99■□□□□ 0.15
PDCD4-208ENST00000483670 PSORS1C2Q9UIG4 136 aa15.99■□□□□ 0.15
PDCD4-208ENST00000483670 ERG28Q9UKR5 140 aa15.98■□□□□ 0.15
PDCD4-208ENST00000483670 UBE2BP63146 152 aa15.97■□□□□ 0.15
PDCD4-208ENST00000483670 LBHQ53QV2 105 aaPredicted RBP15.97■□□□□ 0.15
PDCD4-208ENST00000483670 SPINK6Q6UWN8 80 aa15.97■□□□□ 0.15
PDCD4-208ENST00000483670 ZNF625Q96I27 306 aaPredicted RBP15.97■□□□□ 0.15
PDCD4-208ENST00000483670 TP73-AS1Q9UF72 201 aa15.96■□□□□ 0.15
PDCD4-208ENST00000483670 PLA2G2DQ9UNK4 145 aa15.96■□□□□ 0.15
PDCD4-208ENST00000483670 DPM2O94777 84 aa15.95■□□□□ 0.14
PDCD4-208ENST00000483670 PFN2P35080 140 aa15.95■□□□□ 0.14
PDCD4-208ENST00000483670 C1orf137Q5JT78 98 aa15.94■□□□□ 0.14
PDCD4-208ENST00000483670 SERTAD4-AS1Q5TG53 156 aa15.94■□□□□ 0.14
PDCD4-208ENST00000483670 C22orf24Q9Y442 160 aa15.94■□□□□ 0.14
PDCD4-208ENST00000483670 COA6Q5JTJ3 125 aaKnown RBP15.93■□□□□ 0.14
PDCD4-208ENST00000483670 HERVK_113P61574 105 aa15.92■□□□□ 0.14
PDCD4-208ENST00000483670 IGKCP01834 107 aa15.91■□□□□ 0.14
PDCD4-208ENST00000483670 HERV-K104P63124 156 aa15.91■□□□□ 0.14
PDCD4-208ENST00000483670 SRSF9Q13242 221 aaKnown RBP eCLIP15.91■□□□□ 0.14
PDCD4-208ENST00000483670 ATP6V1G1O75348 118 aa15.9■□□□□ 0.14
PDCD4-208ENST00000483670 MRPL55Q7Z7F7 128 aaKnown RBP15.9■□□□□ 0.14
PDCD4-208ENST00000483670 LRP1Q07954 4544 aaKnown RBP15.9■□□□□ 0.14
PDCD4-208ENST00000483670 FAT3Q8TDW7 4589 aa15.89■□□□□ 0.13
PDCD4-208ENST00000483670 LINC00587B1AMM8 73 aa15.89■□□□□ 0.13
PDCD4-208ENST00000483670 IGLV5-37A0A075B6J1 123 aa15.88■□□□□ 0.13
PDCD4-208ENST00000483670 PLEKHB2Q96CS7 222 aa15.88■□□□□ 0.13
PDCD4-208ENST00000483670 SYS1-DBNDD2H3BUS1 97 aa15.87■□□□□ 0.13
PDCD4-208ENST00000483670 REG3GQ6UW15 175 aa15.87■□□□□ 0.13
PDCD4-208ENST00000483670 NKAPP1Q8N9T2 125 aa15.87■□□□□ 0.13
PDCD4-208ENST00000483670 SND1-IT1Q9HBX3 110 aa15.87■□□□□ 0.13
PDCD4-208ENST00000483670 MYMXA0A1B0GTQ4 84 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms