RNA–Protein interactions for RNA: ENST00000483290.5

COMMD6-210, Transcript of COMM domain containing 6, humanhuman

TSL 2

Gene COMMD6, Length 595 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-210ENST00000483290 PCNX2A6NKB5 2137 aa3.46□□□□□ -1.86
COMMD6-210ENST00000483290 PLXNB1O43157 2135 aa3.46□□□□□ -1.86
COMMD6-210ENST00000483290 MED13Q9UHV7 2174 aa3.45□□□□□ -1.86
COMMD6-210ENST00000483290 ETDCA0A1B0GVM5 59 aa3.45□□□□□ -1.86
COMMD6-210ENST00000483290 A0A1B0GVY2 172 aa3.45□□□□□ -1.86
COMMD6-210ENST00000483290 LINC01590Q5TEZ4 76 aa3.45□□□□□ -1.86
COMMD6-210ENST00000483290 COA5Q86WW8 74 aa3.45□□□□□ -1.86
COMMD6-210ENST00000483290 ZNF625Q96I27 306 aaPredicted RBP3.45□□□□□ -1.86
COMMD6-210ENST00000483290 TDRD6O60522 2096 aaKnown RBP3.45□□□□□ -1.86
COMMD6-210ENST00000483290 IGLV4-69A0A075B6H9 119 aa3.44□□□□□ -1.86
COMMD6-210ENST00000483290 A0A1B0GUV1 79 aa3.44□□□□□ -1.86
COMMD6-210ENST00000483290 KRTAP24-1Q3LI83 254 aa3.44□□□□□ -1.86
COMMD6-210ENST00000483290 Q5W150 140 aa3.44□□□□□ -1.86
COMMD6-210ENST00000483290 MYO7AQ13402 2215 aa3.44□□□□□ -1.86
COMMD6-210ENST00000483290 COL5A1P20908 1838 aaPredicted RBP3.44□□□□□ -1.86
COMMD6-210ENST00000483290 TNRC6BQ9UPQ9 1833 aaKnown RBP3.44□□□□□ -1.86
COMMD6-210ENST00000483290 H3BSH0 61 aa3.43□□□□□ -1.86
COMMD6-210ENST00000483290 C9orf129Q5T035 196 aaKnown RBP3.43□□□□□ -1.86
COMMD6-210ENST00000483290 HCP5Q6MZN7 132 aa3.43□□□□□ -1.86
COMMD6-210ENST00000483290 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
COMMD6-210ENST00000483290 LITAFQ99732 161 aa3.43□□□□□ -1.86
COMMD6-210ENST00000483290 TRGV2A0A075B6R0 118 aa3.42□□□□□ -1.86
COMMD6-210ENST00000483290 A0A1W2PNU3 283 aaPredicted RBP3.42□□□□□ -1.86
COMMD6-210ENST00000483290 CNFNQ9BYD5 112 aa3.42□□□□□ -1.86
COMMD6-210ENST00000483290 SSC5DA1L4H1 1573 aa3.42□□□□□ -1.86
COMMD6-210ENST00000483290 HEATR1Q9H583 2144 aaKnown RBP3.41□□□□□ -1.86
COMMD6-210ENST00000483290 IGKV3OR2-268A0A0C4DH90 116 aa3.41□□□□□ -1.86
COMMD6-210ENST00000483290 IGKV3-15P01624 115 aa3.41□□□□□ -1.86
COMMD6-210ENST00000483290 GIG44P09565 113 aaPredicted RBP3.41□□□□□ -1.86
COMMD6-210ENST00000483290 ST20-AS1Q8NBB2 130 aa3.41□□□□□ -1.86
COMMD6-210ENST00000483290 SPRR4Q96PI1 79 aa3.41□□□□□ -1.86
COMMD6-210ENST00000483290 TNRC6CQ9HCJ0 1690 aaKnown RBP3.4□□□□□ -1.86
COMMD6-210ENST00000483290 PATE1Q8WXA2 126 aa3.4□□□□□ -1.87
COMMD6-210ENST00000483290 KCNQ1DNQ9H478 68 aa3.4□□□□□ -1.87
COMMD6-210ENST00000483290 MYO7BQ6PIF6 2116 aa3.4□□□□□ -1.87
COMMD6-210ENST00000483290 C9orf163Q8N9P6 203 aa3.39□□□□□ -1.87
COMMD6-210ENST00000483290 TET1Q8NFU7 2136 aa3.39□□□□□ -1.87
COMMD6-210ENST00000483290 LINC00308Q8TCZ7 52 aa3.39□□□□□ -1.87
COMMD6-210ENST00000483290 MPDZO75970 2070 aa3.39□□□□□ -1.87
COMMD6-210ENST00000483290 ZNF407Q9C0G0 2248 aa3.38□□□□□ -1.87
COMMD6-210ENST00000483290 A0A1B0GU69 56 aa3.38□□□□□ -1.87
COMMD6-210ENST00000483290 NDUFA1O15239 70 aa3.38□□□□□ -1.87
COMMD6-210ENST00000483290 ZNF861PO60384 105 aa3.38□□□□□ -1.87
COMMD6-210ENST00000483290 MRPL33O75394 65 aaKnown RBP3.38□□□□□ -1.87
COMMD6-210ENST00000483290 PRB2P02812 416 aaPredicted RBP3.38□□□□□ -1.87
COMMD6-210ENST00000483290 IGKV4-1P06312 121 aa3.38□□□□□ -1.87
COMMD6-210ENST00000483290 IGKV2-29A2NJV5 120 aaPredicted RBP3.37□□□□□ -1.87
COMMD6-210ENST00000483290 IGLV3-1P01715 115 aa3.37□□□□□ -1.87
COMMD6-210ENST00000483290 COX7BP24311 80 aa3.37□□□□□ -1.87
COMMD6-210ENST00000483290 RPL37AP61513 92 aaKnown RBP3.37□□□□□ -1.87
COMMD6-210ENST00000483290 LCE3AQ5TA76 89 aa3.37□□□□□ -1.87
COMMD6-210ENST00000483290 TET2Q6N021 2002 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-210ENST00000483290 IGLV4-60A0A075B6I1 120 aa3.36□□□□□ -1.87
COMMD6-210ENST00000483290 IGKV2-40A0A087WW87 121 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-210ENST00000483290 TRBV6-4A0A1B0GX49 114 aa3.36□□□□□ -1.87
COMMD6-210ENST00000483290 A0A1W2PPR1 153 aa3.36□□□□□ -1.87
COMMD6-210ENST00000483290 IGKV2D-40P01614 121 aaPredicted RBP3.36□□□□□ -1.87
COMMD6-210ENST00000483290 LCE3CQ5T5A8 94 aa3.36□□□□□ -1.87
COMMD6-210ENST00000483290 KIF26BQ2KJY2 2108 aa3.35□□□□□ -1.87
COMMD6-210ENST00000483290 TRGV1A0A0A0MS02 117 aa3.35□□□□□ -1.87
COMMD6-210ENST00000483290 FAM168BA1KXE4 195 aa3.35□□□□□ -1.87
COMMD6-210ENST00000483290 TYMSOSQ8TAI1 123 aa3.35□□□□□ -1.87
COMMD6-210ENST00000483290 ABCA7Q8IZY2 2146 aa3.35□□□□□ -1.87
COMMD6-210ENST00000483290 INTS1Q8N201 2190 aaKnown RBP3.34□□□□□ -1.87
COMMD6-210ENST00000483290 LINC00959A0A1B0GUT2 108 aa3.34□□□□□ -1.87
COMMD6-210ENST00000483290 PRB1P04280 392 aa3.34□□□□□ -1.87
COMMD6-210ENST00000483290 SPTBP11277 2137 aa3.34□□□□□ -1.88
COMMD6-210ENST00000483290 A0A087WTM6 91 aa3.33□□□□□ -1.88
COMMD6-210ENST00000483290 Q6ZTI0 123 aa3.33□□□□□ -1.88
COMMD6-210ENST00000483290 NOTCH2Q04721 2471 aa3.33□□□□□ -1.88
COMMD6-210ENST00000483290 CEP192Q8TEP8 1941 aa3.32□□□□□ -1.88
COMMD6-210ENST00000483290 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.32□□□□□ -1.88
COMMD6-210ENST00000483290 SVILO95425 2214 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 PI4KAP42356 2102 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 ACYP2P14621 99 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 Q6ZQY7 126 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 SMIM11BQ8TCY0 68 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 PSORS1C2Q9UIG4 136 aa3.31□□□□□ -1.88
COMMD6-210ENST00000483290 CCL22O00626 93 aa3.3□□□□□ -1.88
COMMD6-210ENST00000483290 SPINK14Q6IE38 97 aa3.3□□□□□ -1.88
COMMD6-210ENST00000483290 ARFGEF3Q5TH69 2177 aa3.29□□□□□ -1.88
COMMD6-210ENST00000483290 HEATR5BQ9P2D3 2071 aa3.29□□□□□ -1.88
COMMD6-210ENST00000483290 NBDYA0A0U1RRE5 68 aa3.29□□□□□ -1.88
COMMD6-210ENST00000483290 RPS27P42677 84 aaKnown RBP3.29□□□□□ -1.88
COMMD6-210ENST00000483290 LINC00158P58513 81 aa3.29□□□□□ -1.88
COMMD6-210ENST00000483290 PRO2289Q9P1D8 64 aa3.29□□□□□ -1.88
COMMD6-210ENST00000483290 CABIN1Q9Y6J0 2220 aa3.28□□□□□ -1.88
COMMD6-210ENST00000483290 MALRD1Q5VYJ5 2156 aa3.28□□□□□ -1.88
COMMD6-210ENST00000483290 KRTAP13-3Q3SY46 172 aa3.28□□□□□ -1.88
COMMD6-210ENST00000483290 DEFB132Q7Z7B7 95 aa3.28□□□□□ -1.88
COMMD6-210ENST00000483290 LINC00472Q9H8W2 130 aa3.28□□□□□ -1.88
COMMD6-210ENST00000483290 ZGRF1Q86YA3 2104 aa3.28□□□□□ -1.89
COMMD6-210ENST00000483290 DEFB131BA0A096LNP1 70 aa3.27□□□□□ -1.89
COMMD6-210ENST00000483290 A0A1W2PNN7 141 aa3.27□□□□□ -1.89
COMMD6-210ENST00000483290 SPINK9Q5DT21 86 aa3.27□□□□□ -1.89
COMMD6-210ENST00000483290 C5orf56Q8N8D9 126 aa3.27□□□□□ -1.89
COMMD6-210ENST00000483290 FREM3P0C091 2139 aa3.26□□□□□ -1.89
COMMD6-210ENST00000483290 CR1P17927 2039 aa3.26□□□□□ -1.89
COMMD6-210ENST00000483290 PRB3Q04118 309 aaPredicted RBP3.26□□□□□ -1.89
COMMD6-210ENST00000483290 LY6EQ16553 131 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 99.1 ms