RNA–Protein interactions for RNA: ENST00000482733.1

HMGN1-214, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 701 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-214ENST00000482733 STPG4Q8N801 248 aa10.52□□□□□ -0.73
HMGN1-214ENST00000482733 IFI27L1Q96BM0 104 aa10.52□□□□□ -0.73
HMGN1-214ENST00000482733 C6orf48Q9UBA6 75 aa10.52□□□□□ -0.73
HMGN1-214ENST00000482733 SMIM1B2RUZ4 78 aa10.51□□□□□ -0.73
HMGN1-214ENST00000482733 SERF1AO75920 110 aa10.51□□□□□ -0.73
HMGN1-214ENST00000482733 TLX1NBP0CAT3 122 aa10.51□□□□□ -0.73
HMGN1-214ENST00000482733 CXCL5P42830 114 aa10.51□□□□□ -0.73
HMGN1-214ENST00000482733 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
HMGN1-214ENST00000482733 TRAV12-1A0A0B4J245 112 aa10.5□□□□□ -0.73
HMGN1-214ENST00000482733 C2orf82Q6UX34 121 aa10.5□□□□□ -0.73
HMGN1-214ENST00000482733 FAM19A2Q8N3H0 131 aa10.5□□□□□ -0.73
HMGN1-214ENST00000482733 CHTOPQ9Y3Y2 248 aaKnown RBP10.49□□□□□ -0.73
HMGN1-214ENST00000482733 LEPROTL1O95214 131 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 INAFM2P0DMQ5 153 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 S100A1P23297 94 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 LINC00310P59036 64 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 COX7B2Q8TF08 81 aa10.48□□□□□ -0.73
HMGN1-214ENST00000482733 F8VRH5 84 aa10.47□□□□□ -0.73
HMGN1-214ENST00000482733 ZNF22P17026 224 aaPredicted RBP10.47□□□□□ -0.73
HMGN1-214ENST00000482733 RPL37AP61513 92 aaKnown RBP10.47□□□□□ -0.73
HMGN1-214ENST00000482733 C7orf33Q8WU49 177 aa10.47□□□□□ -0.73
HMGN1-214ENST00000482733 SRRM2Q9UQ35 2752 aaKnown RBP10.46□□□□□ -0.73
HMGN1-214ENST00000482733 NDUFC2-KCTD14E9PQ53 114 aa10.46□□□□□ -0.73
HMGN1-214ENST00000482733 HSPB8Q9UJY1 196 aa10.46□□□□□ -0.73
HMGN1-214ENST00000482733 C11orf86A6NJI1 115 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BKO60814 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BJP06899 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BOP23527 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BBP33778 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BDP58876 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BCP62807 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST2H2BEQ16778 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.45□□□□□ -0.74
HMGN1-214ENST00000482733 Q6ZRP5 223 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BHQ93079 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BNQ99877 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 HIST1H2BMQ99879 126 aa10.45□□□□□ -0.74
HMGN1-214ENST00000482733 IGLV5-39A0A0G2JS06 123 aa10.44□□□□□ -0.74
HMGN1-214ENST00000482733 NUPR1O60356 82 aa10.44□□□□□ -0.74
HMGN1-214ENST00000482733 TMEM170BQ5T4T1 132 aa10.44□□□□□ -0.74
HMGN1-214ENST00000482733 GAGE2EQ4V326 116 aa10.43□□□□□ -0.74
HMGN1-214ENST00000482733 GAGE2DQ9UEU5 116 aa10.43□□□□□ -0.74
HMGN1-214ENST00000482733 A0A1W2PNN7 141 aa10.42□□□□□ -0.74
HMGN1-214ENST00000482733 KRTAP10-4P60372 401 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-214ENST00000482733 C9orf116Q5BN46 136 aaPredicted RBP10.42□□□□□ -0.74
HMGN1-214ENST00000482733 ATP6V1G1O75348 118 aa10.41□□□□□ -0.74
HMGN1-214ENST00000482733 FABP4P15090 132 aa10.41□□□□□ -0.74
HMGN1-214ENST00000482733 SFTA2Q6UW10 78 aa10.4□□□□□ -0.74
HMGN1-214ENST00000482733 H0Y8G0 127 aa10.39□□□□□ -0.75
HMGN1-214ENST00000482733 ODF1Q14990 250 aa10.39□□□□□ -0.75
HMGN1-214ENST00000482733 TMEM223A0PJW6 202 aa10.38□□□□□ -0.75
HMGN1-214ENST00000482733 MAP1LC3CQ9BXW4 147 aa10.38□□□□□ -0.75
HMGN1-214ENST00000482733 PLNP26678 52 aa10.37□□□□□ -0.75
HMGN1-214ENST00000482733 COA6Q5JTJ3 125 aaKnown RBP10.36□□□□□ -0.75
HMGN1-214ENST00000482733 C9orf129Q5T035 196 aaKnown RBP10.36□□□□□ -0.75
HMGN1-214ENST00000482733 MYCBP2O75592 4640 aa10.34□□□□□ -0.75
HMGN1-214ENST00000482733 FAM168BA1KXE4 195 aa10.34□□□□□ -0.75
HMGN1-214ENST00000482733 DPM2O94777 84 aa10.34□□□□□ -0.75
HMGN1-214ENST00000482733 PRR3P79522 188 aaKnown RBP10.34□□□□□ -0.75
HMGN1-214ENST00000482733 FAM19A5Q7Z5A7 132 aaPredicted RBP10.34□□□□□ -0.75
HMGN1-214ENST00000482733 PKHD1L1Q86WI1 4243 aa10.33□□□□□ -0.76
HMGN1-214ENST00000482733 COX17Q14061 63 aa10.33□□□□□ -0.76
HMGN1-214ENST00000482733 PHF5AQ7RTV0 110 aaKnown RBP10.33□□□□□ -0.76
HMGN1-214ENST00000482733 XAGE1AQ9HD64 81 aa10.33□□□□□ -0.76
HMGN1-214ENST00000482733 IGKCP01834 107 aa10.32□□□□□ -0.76
HMGN1-214ENST00000482733 ZNF625Q96I27 306 aaPredicted RBP10.32□□□□□ -0.76
HMGN1-214ENST00000482733 ERG28Q9UKR5 140 aa10.32□□□□□ -0.76
HMGN1-214ENST00000482733 M0QXV9 152 aa10.31□□□□□ -0.76
HMGN1-214ENST00000482733 SYS1-DBNDD2H3BUS1 97 aa10.3□□□□□ -0.76
HMGN1-214ENST00000482733 PFN2P35080 140 aa10.3□□□□□ -0.76
HMGN1-214ENST00000482733 HERVK_113P61574 105 aa10.3□□□□□ -0.76
HMGN1-214ENST00000482733 KRTAP7-1Q8IUC3 87 aa10.3□□□□□ -0.76
HMGN1-214ENST00000482733 HNRNPA3P51991 378 aaKnown RBP10.29□□□□□ -0.76
HMGN1-214ENST00000482733 PMCHL2Q9BQD1 86 aa10.29□□□□□ -0.76
HMGN1-214ENST00000482733 PLA2G2DQ9UNK4 145 aa10.29□□□□□ -0.76
HMGN1-214ENST00000482733 HERV-K104P63124 156 aa10.28□□□□□ -0.76
HMGN1-214ENST00000482733 LBHQ53QV2 105 aaPredicted RBP10.28□□□□□ -0.76
HMGN1-214ENST00000482733 SERTAD4-AS1Q5TG53 156 aa10.28□□□□□ -0.76
HMGN1-214ENST00000482733 PET117Q6UWS5 81 aa10.28□□□□□ -0.76
HMGN1-214ENST00000482733 PLEKHB2Q96CS7 222 aa10.28□□□□□ -0.76
HMGN1-214ENST00000482733 TP73-AS1Q9UF72 201 aa10.28□□□□□ -0.76
HMGN1-214ENST00000482733 LEPROTO15243 131 aa10.27□□□□□ -0.77
HMGN1-214ENST00000482733 UBE2BP63146 152 aa10.27□□□□□ -0.77
HMGN1-214ENST00000482733 PSORS1C2Q9UIG4 136 aa10.27□□□□□ -0.77
HMGN1-214ENST00000482733 C22orf24Q9Y442 160 aa10.27□□□□□ -0.77
HMGN1-214ENST00000482733 FLG2Q5D862 2391 aaPredicted RBP10.26□□□□□ -0.77
HMGN1-214ENST00000482733 FAT3Q8TDW7 4589 aa10.26□□□□□ -0.77
HMGN1-214ENST00000482733 MYMXA0A1B0GTQ4 84 aa10.26□□□□□ -0.77
HMGN1-214ENST00000482733 LINC00587B1AMM8 73 aa10.26□□□□□ -0.77
HMGN1-214ENST00000482733 NDUFA12Q9UI09 145 aa10.26□□□□□ -0.77
HMGN1-214ENST00000482733 KRTAP29-1A8MX34 341 aaPredicted RBP10.25□□□□□ -0.77
HMGN1-214ENST00000482733 OXTP01178 125 aa10.25□□□□□ -0.77
HMGN1-214ENST00000482733 LINC01545Q5VT33 79 aa10.25□□□□□ -0.77
HMGN1-214ENST00000482733 LINC00158P58513 81 aa10.24□□□□□ -0.77
HMGN1-214ENST00000482733 C1orf137Q5JT78 98 aa10.24□□□□□ -0.77
HMGN1-214ENST00000482733 SPINK6Q6UWN8 80 aa10.24□□□□□ -0.77
HMGN1-214ENST00000482733 MRPL55Q7Z7F7 128 aaKnown RBP10.24□□□□□ -0.77
HMGN1-214ENST00000482733 SND1-IT1Q9HBX3 110 aa10.24□□□□□ -0.77
HMGN1-214ENST00000482733 IGLV5-37A0A075B6J1 123 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 98.4 ms