RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 FUSP35637 526 aaKnown RBP eCLIP15.02■□□□□ -0
SHISA4-203ENST00000481699 KRTAP10-2P60368 255 aa15.02■□□□□ -0
SHISA4-203ENST00000481699 C2orf82Q6UX34 121 aa15.02■□□□□ -0
SHISA4-203ENST00000481699 A0A1B0GVY2 172 aa15.01□□□□□ -0.01
SHISA4-203ENST00000481699 E9PLD3 99 aa15.01□□□□□ -0.01
SHISA4-203ENST00000481699 LGALS3P17931 250 aaKnown RBP15.01□□□□□ -0.01
SHISA4-203ENST00000481699 JOSD1Q15040 202 aaPredicted RBP15.01□□□□□ -0.01
SHISA4-203ENST00000481699 SFTA2Q6UW10 78 aa15.01□□□□□ -0.01
SHISA4-203ENST00000481699 UNQ6190/PRO20217Q6UXQ8 127 aa15.01□□□□□ -0.01
SHISA4-203ENST00000481699 Q6ZRU5 148 aa15.01□□□□□ -0.01
SHISA4-203ENST00000481699 SLPIP03973 132 aa15□□□□□ -0.01
SHISA4-203ENST00000481699 J3QQQ9 107 aa14.99□□□□□ -0.01
SHISA4-203ENST00000481699 FAT2Q9NYQ8 4349 aa14.99□□□□□ -0.01
SHISA4-203ENST00000481699 PKIGQ9Y2B9 76 aa14.98□□□□□ -0.01
SHISA4-203ENST00000481699 TRBV30A0A0K0K1B3 111 aa14.97□□□□□ -0.01
SHISA4-203ENST00000481699 C10orf25Q5T742 122 aa14.97□□□□□ -0.01
SHISA4-203ENST00000481699 C9orf163Q8N9P6 203 aa14.97□□□□□ -0.01
SHISA4-203ENST00000481699 RYR1P21817 5038 aa14.97□□□□□ -0.01
SHISA4-203ENST00000481699 GCSHP23434 173 aa14.96□□□□□ -0.01
SHISA4-203ENST00000481699 RNF151Q2KHN1 245 aa14.96□□□□□ -0.01
SHISA4-203ENST00000481699 NDUFA12Q9UI09 145 aa14.96□□□□□ -0.01
SHISA4-203ENST00000481699 MYMXA0A1B0GTQ4 84 aa14.95□□□□□ -0.02
SHISA4-203ENST00000481699 C16orf90A8MZG2 172 aa14.95□□□□□ -0.02
SHISA4-203ENST00000481699 C6orf48Q9UBA6 75 aa14.95□□□□□ -0.02
SHISA4-203ENST00000481699 NMUP48645 174 aa14.94□□□□□ -0.02
SHISA4-203ENST00000481699 TSPEAR-AS2P59090 65 aa14.94□□□□□ -0.02
SHISA4-203ENST00000481699 ANKRD39Q53RE8 183 aa14.94□□□□□ -0.02
SHISA4-203ENST00000481699 MAJINQ3KP22 176 aa14.93□□□□□ -0.02
SHISA4-203ENST00000481699 LINC01620Q4KN68 170 aa14.93□□□□□ -0.02
SHISA4-203ENST00000481699 KIAA1109Q2LD37 5005 aa14.92□□□□□ -0.02
SHISA4-203ENST00000481699 HERV-K104P63124 156 aa14.92□□□□□ -0.02
SHISA4-203ENST00000481699 PYY3Q5JQD4 70 aa14.92□□□□□ -0.02
SHISA4-203ENST00000481699 ZNF625Q96I27 306 aaPredicted RBP14.92□□□□□ -0.02
SHISA4-203ENST00000481699 VAMP8Q9BV40 100 aa14.92□□□□□ -0.02
SHISA4-203ENST00000481699 HECTD4Q9Y4D8 3996 aa14.92□□□□□ -0.02
SHISA4-203ENST00000481699 LOC107984640A0A0U1RRK4 108 aa14.91□□□□□ -0.02
SHISA4-203ENST00000481699 IGKV2D-26A0A0A0MRZ7 120 aa14.9□□□□□ -0.02
SHISA4-203ENST00000481699 RPL18AQ02543 176 aaKnown RBP14.89□□□□□ -0.03
SHISA4-203ENST00000481699 C9orf116Q5BN46 136 aaPredicted RBP14.89□□□□□ -0.03
SHISA4-203ENST00000481699 MEIG1Q5JSS6 88 aa14.89□□□□□ -0.03
SHISA4-203ENST00000481699 DNAH11Q96DT5 4516 aa14.88□□□□□ -0.03
SHISA4-203ENST00000481699 ZNF815PA8K554 130 aa14.88□□□□□ -0.03
SHISA4-203ENST00000481699 PKD1P98161 4303 aa14.87□□□□□ -0.03
SHISA4-203ENST00000481699 LINC00587B1AMM8 73 aa14.87□□□□□ -0.03
SHISA4-203ENST00000481699 ERG28Q9UKR5 140 aa14.87□□□□□ -0.03
SHISA4-203ENST00000481699 PAM16Q9Y3D7 125 aa14.87□□□□□ -0.03
SHISA4-203ENST00000481699 NDUFC2-KCTD14E9PQ53 114 aa14.86□□□□□ -0.03
SHISA4-203ENST00000481699 PFN2P35080 140 aa14.86□□□□□ -0.03
SHISA4-203ENST00000481699 GAGE2BQ13066 116 aa14.86□□□□□ -0.03
SHISA4-203ENST00000481699 SDIM1Q6ZPB5 146 aa14.86□□□□□ -0.03
SHISA4-203ENST00000481699 SPATA45Q537H7 98 aa14.85□□□□□ -0.03
SHISA4-203ENST00000481699 LOC105371267A0A1B0GV96 52 aa14.84□□□□□ -0.03
SHISA4-203ENST00000481699 TLX1NBP0CAT3 122 aa14.84□□□□□ -0.03
SHISA4-203ENST00000481699 LINC00158P58513 81 aa14.84□□□□□ -0.03
SHISA4-203ENST00000481699 COX17Q14061 63 aa14.84□□□□□ -0.03
SHISA4-203ENST00000481699 IGKV2-24A0A0C4DH68 120 aa14.83□□□□□ -0.04
SHISA4-203ENST00000481699 KRTAP10-1P60331 282 aa14.83□□□□□ -0.04
SHISA4-203ENST00000481699 S100A12P80511 92 aa14.83□□□□□ -0.04
SHISA4-203ENST00000481699 CIRBPQ14011 172 aaKnown RBP14.83□□□□□ -0.04
SHISA4-203ENST00000481699 DPH3Q96FX2 82 aa14.83□□□□□ -0.04
SHISA4-203ENST00000481699 TTTY13Q9BZ97 58 aa14.83□□□□□ -0.04
SHISA4-203ENST00000481699 GAGE2EQ4V326 116 aa14.82□□□□□ -0.04
SHISA4-203ENST00000481699 SCGB1D4Q6XE38 83 aa14.82□□□□□ -0.04
SHISA4-203ENST00000481699 LINC00474Q9P2X8 69 aa14.82□□□□□ -0.04
SHISA4-203ENST00000481699 GAGE2DQ9UEU5 116 aa14.82□□□□□ -0.04
SHISA4-203ENST00000481699 A0A0U1RRA0 63 aa14.81□□□□□ -0.04
SHISA4-203ENST00000481699 PCP2Q8IVA1 136 aa14.81□□□□□ -0.04
SHISA4-203ENST00000481699 A0A096LNI7 61 aa14.8□□□□□ -0.04
SHISA4-203ENST00000481699 A0A0J9YXY3 114 aa14.8□□□□□ -0.04
SHISA4-203ENST00000481699 SMIM13P0DJ93 91 aa14.8□□□□□ -0.04
SHISA4-203ENST00000481699 PTTG1IPP53801 180 aa14.8□□□□□ -0.04
SHISA4-203ENST00000481699 Q6ZRP5 223 aa14.8□□□□□ -0.04
SHISA4-203ENST00000481699 SMIM6P0DI80 62 aa14.79□□□□□ -0.04
SHISA4-203ENST00000481699 CHTF8P0CG12 524 aa14.77□□□□□ -0.05
SHISA4-203ENST00000481699 COX8AP10176 69 aa14.75□□□□□ -0.05
SHISA4-203ENST00000481699 C14orf144Q96I85 54 aa14.74□□□□□ -0.05
SHISA4-203ENST00000481699 XAGE1AQ9HD64 81 aa14.74□□□□□ -0.05
SHISA4-203ENST00000481699 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.74□□□□□ -0.05
SHISA4-203ENST00000481699 TIMM17BO60830 172 aa14.73□□□□□ -0.05
SHISA4-203ENST00000481699 MIR7-3HGQ8N6C7 128 aa14.73□□□□□ -0.05
SHISA4-203ENST00000481699 SPACA4Q8TDM5 124 aa14.73□□□□□ -0.05
SHISA4-203ENST00000481699 DNAH5Q8TE73 4624 aa14.72□□□□□ -0.05
SHISA4-203ENST00000481699 TMEM238C9JI98 176 aa14.72□□□□□ -0.05
SHISA4-203ENST00000481699 SND1-IT1Q9HBX3 110 aa14.72□□□□□ -0.05
SHISA4-203ENST00000481699 SLC25A34Q6PIV7 304 aa14.71□□□□□ -0.05
SHISA4-203ENST00000481699 BOD1L2Q8IYS8 172 aa14.71□□□□□ -0.05
SHISA4-203ENST00000481699 FAM30AQ9NZY2 134 aa14.71□□□□□ -0.05
SHISA4-203ENST00000481699 Q6ZSA8 131 aa14.7□□□□□ -0.06
SHISA4-203ENST00000481699 MIEN1Q9BRT3 115 aa14.7□□□□□ -0.06
SHISA4-203ENST00000481699 PANO1I0J062 215 aa14.69□□□□□ -0.06
SHISA4-203ENST00000481699 DLEU1O43261 78 aa14.69□□□□□ -0.06
SHISA4-203ENST00000481699 DAND5Q8N907 189 aa14.69□□□□□ -0.06
SHISA4-203ENST00000481699 PKHD1P08F94 4074 aa14.69□□□□□ -0.06
SHISA4-203ENST00000481699 C9orf129Q5T035 196 aaKnown RBP14.68□□□□□ -0.06
SHISA4-203ENST00000481699 A0A087WYN8 130 aa14.66□□□□□ -0.06
SHISA4-203ENST00000481699 ADAMTSL4-AS1Q5T5F5 129 aa14.66□□□□□ -0.06
SHISA4-203ENST00000481699 ABCA13Q86UQ4 5058 aa14.66□□□□□ -0.06
SHISA4-203ENST00000481699 FAM19A5Q7Z5A7 132 aaPredicted RBP14.65□□□□□ -0.06
SHISA4-203ENST00000481699 NPC2P61916 151 aa14.64□□□□□ -0.07
SHISA4-203ENST00000481699 COPS9Q8WXC6 57 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms