RNA–Protein interactions for RNA: ENST00000481002.5

SHROOM3-205, Transcript of shroom family member 3, humanhuman

TSL 4

Gene SHROOM3, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-205ENST00000481002 IGKCP01834 107 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 KRTDAPP60985 99 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 RNF151Q2KHN1 245 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 C10orf25Q5T742 122 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 UNQ6190/PRO20217Q6UXQ8 127 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 LRP1BQ9NZR2 4599 aa7.97□□□□□ -1.13
SHROOM3-205ENST00000481002 CXCL5P42830 114 aa7.96□□□□□ -1.14
SHROOM3-205ENST00000481002 CKS1BP61024 79 aa7.96□□□□□ -1.14
SHROOM3-205ENST00000481002 C2orf82Q6UX34 121 aa7.96□□□□□ -1.14
SHROOM3-205ENST00000481002 Q6ZSA8 131 aa7.95□□□□□ -1.14
SHROOM3-205ENST00000481002 TRBV30A0A0K0K1B3 111 aa7.94□□□□□ -1.14
SHROOM3-205ENST00000481002 FAM30AQ9NZY2 134 aa7.94□□□□□ -1.14
SHROOM3-205ENST00000481002 C6orf48Q9UBA6 75 aa7.94□□□□□ -1.14
SHROOM3-205ENST00000481002 PKIGQ9Y2B9 76 aa7.93□□□□□ -1.14
SHROOM3-205ENST00000481002 DNAH8Q96JB1 4490 aa7.92□□□□□ -1.14
SHROOM3-205ENST00000481002 LOC107984640A0A0U1RRK4 108 aa7.92□□□□□ -1.14
SHROOM3-205ENST00000481002 C20orf202A1L168 122 aa7.92□□□□□ -1.14
SHROOM3-205ENST00000481002 TLX1NBP0CAT3 122 aa7.92□□□□□ -1.14
SHROOM3-205ENST00000481002 LEPROTO15243 131 aa7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 CDK2AP2O75956 126 aa7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 AKR1D1P51857 326 aa7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 HERVK_113P61574 105 aa7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 CIRBPQ14011 172 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 C9orf116Q5BN46 136 aaPredicted RBP7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 TMA7Q9Y2S6 64 aaKnown RBP7.91□□□□□ -1.14
SHROOM3-205ENST00000481002 A0A096LNI7 61 aa7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 XGP55808 180 aa7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 SFTA2Q6UW10 78 aa7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 PLEKHB2Q96CS7 222 aa7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 ZNF625Q96I27 306 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.9□□□□□ -1.14
SHROOM3-205ENST00000481002 E9PLD3 99 aa7.89□□□□□ -1.15
SHROOM3-205ENST00000481002 PANO1I0J062 215 aa7.89□□□□□ -1.15
SHROOM3-205ENST00000481002 PTTG1IPP53801 180 aa7.89□□□□□ -1.15
SHROOM3-205ENST00000481002 STPG4Q8N801 248 aa7.89□□□□□ -1.15
SHROOM3-205ENST00000481002 NDUFC2-KCTD14E9PQ53 114 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 J3QQQ9 107 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 CHTF8P0CG12 524 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 Q6ZRP5 223 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 SPACA4Q8TDM5 124 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 LINC00474Q9P2X8 69 aa7.88□□□□□ -1.15
SHROOM3-205ENST00000481002 APOBP04114 4563 aaKnown RBP7.87□□□□□ -1.15
SHROOM3-205ENST00000481002 TSPEAR-AS2P59090 65 aa7.87□□□□□ -1.15
SHROOM3-205ENST00000481002 RPL18AQ02543 176 aaKnown RBP7.87□□□□□ -1.15
SHROOM3-205ENST00000481002 GAGE2BQ13066 116 aa7.87□□□□□ -1.15
SHROOM3-205ENST00000481002 NDUFA12Q9UI09 145 aa7.87□□□□□ -1.15
SHROOM3-205ENST00000481002 IGKV2-24A0A0C4DH68 120 aa7.86□□□□□ -1.15
SHROOM3-205ENST00000481002 NMUP48645 174 aa7.86□□□□□ -1.15
SHROOM3-205ENST00000481002 HERV-K104P63124 156 aa7.86□□□□□ -1.15
SHROOM3-205ENST00000481002 MAJINQ3KP22 176 aa7.86□□□□□ -1.15
SHROOM3-205ENST00000481002 ATOH7Q8N100 152 aa7.86□□□□□ -1.15
SHROOM3-205ENST00000481002 A0A087WYN8 130 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 MYMXA0A1B0GTQ4 84 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 LGALS3P17931 250 aaKnown RBP7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 COX17Q14061 63 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 SCXQ7RTU7 201 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 CIRBP-AS1Q8TBR5 109 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 DPH3Q96FX2 82 aa7.85□□□□□ -1.15
SHROOM3-205ENST00000481002 IGKV2D-26A0A0A0MRZ7 120 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 EPM2AB3EWF7 344 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 SCGB1D1O95968 90 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 GAGE2EQ4V326 116 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 PLAC8Q9NZF1 115 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 GAGE2DQ9UEU5 116 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 ERG28Q9UKR5 140 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 BIRC6Q9NR09 4857 aa7.84□□□□□ -1.15
SHROOM3-205ENST00000481002 PFN2P35080 140 aa7.83□□□□□ -1.16
SHROOM3-205ENST00000481002 HAMPP81172 84 aa7.83□□□□□ -1.16
SHROOM3-205ENST00000481002 ANKRD39Q53RE8 183 aa7.83□□□□□ -1.16
SHROOM3-205ENST00000481002 LINC00587B1AMM8 73 aa7.82□□□□□ -1.16
SHROOM3-205ENST00000481002 JOSD1Q15040 202 aaPredicted RBP7.82□□□□□ -1.16
SHROOM3-205ENST00000481002 C9orf129Q5T035 196 aaKnown RBP7.82□□□□□ -1.16
SHROOM3-205ENST00000481002 A0A1W2PNN7 141 aa7.81□□□□□ -1.16
SHROOM3-205ENST00000481002 LINC00158P58513 81 aa7.81□□□□□ -1.16
SHROOM3-205ENST00000481002 HSBP1L1C9JCN9 74 aa7.8□□□□□ -1.16
SHROOM3-205ENST00000481002 SMIM13P0DJ93 91 aa7.8□□□□□ -1.16
SHROOM3-205ENST00000481002 XAGE1AQ9HD64 81 aa7.8□□□□□ -1.16
SHROOM3-205ENST00000481002 HSPG2P98160 4391 aa7.8□□□□□ -1.16
SHROOM3-205ENST00000481002 A0A0J9YXY3 114 aa7.79□□□□□ -1.16
SHROOM3-205ENST00000481002 MEIG1Q5JSS6 88 aa7.79□□□□□ -1.16
SHROOM3-205ENST00000481002 SND1-IT1Q9HBX3 110 aa7.79□□□□□ -1.16
SHROOM3-205ENST00000481002 A0A0U1RRA0 63 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 FAM168BA1KXE4 195 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 ZNF815PA8K554 130 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 KRTAP7-1Q8IUC3 87 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 TTTY13Q9BZ97 58 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 KIAA1109Q2LD37 5005 aa7.78□□□□□ -1.16
SHROOM3-205ENST00000481002 SMR3BP02814 79 aaPredicted RBP7.77□□□□□ -1.17
SHROOM3-205ENST00000481002 PYY3Q5JQD4 70 aa7.77□□□□□ -1.17
SHROOM3-205ENST00000481002 PCP2Q8IVA1 136 aa7.77□□□□□ -1.17
SHROOM3-205ENST00000481002 KRTAP17-1Q9BYP8 105 aa7.77□□□□□ -1.17
SHROOM3-205ENST00000481002 TIMM17BO60830 172 aa7.76□□□□□ -1.17
SHROOM3-205ENST00000481002 Q8N1X5 172 aa7.76□□□□□ -1.17
SHROOM3-205ENST00000481002 MIR7-3HGQ8N6C7 128 aa7.76□□□□□ -1.17
SHROOM3-205ENST00000481002 LOC107984156A0A0G2JMH3 177 aa7.75□□□□□ -1.17
SHROOM3-205ENST00000481002 ADAMTSL4-AS1Q5T5F5 129 aa7.75□□□□□ -1.17
SHROOM3-205ENST00000481002 SERTAD4-AS1Q5TG53 156 aa7.75□□□□□ -1.17
SHROOM3-205ENST00000481002 FAM19A5Q7Z5A7 132 aaPredicted RBP7.75□□□□□ -1.17
SHROOM3-205ENST00000481002 ARL17AQ8IVW1 177 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms