RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 COMMD7Q86VX2 200 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 DPH3Q96FX2 82 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 BTF3L4Q96K17 158 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 TMEM242Q9NWH2 141 aa4.05□□□□□ -1.76
HOXB3-209ENST00000478644 HERC1Q15751 4861 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.04□□□□□ -1.76
HOXB3-209ENST00000478644 IGKV2-29A2NJV5 120 aaPredicted RBP4.04□□□□□ -1.76
HOXB3-209ENST00000478644 TCAPO15273 167 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 FGF6P10767 208 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 NDUFV3P56181 108 aaKnown RBP4.04□□□□□ -1.76
HOXB3-209ENST00000478644 TMEM136Q6ZRR5 245 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 C7orf33Q8WU49 177 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 TMEM101Q96IK0 257 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 KIR2DL4Q99706 377 aa4.04□□□□□ -1.76
HOXB3-209ENST00000478644 CARHSP1Q9Y2V2 147 aaKnown RBP4.04□□□□□ -1.76
HOXB3-209ENST00000478644 TRAV9-1A0A075B6T8 112 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 TINCRA0A1B0GVN0 87 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 C7orf77A4D0Y5 90 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 D6R8Y8 96 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 FCER1GP30273 86 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 CIRBPQ14011 172 aaKnown RBP4.03□□□□□ -1.76
HOXB3-209ENST00000478644 AMMECR1LQ6DCA0 310 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 SDIM1Q6ZPB5 146 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 ORMDL3Q8N138 153 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 LAMTOR2Q9Y2Q5 125 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 DNAH8Q96JB1 4490 aa4.03□□□□□ -1.76
HOXB3-209ENST00000478644 IGLV10-54A0A075B6I4 117 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 NPYP01303 97 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 S100A12P80511 92 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 RHEBQ15382 184 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 CLPSL2Q6UWE3 100 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 OR5A1Q8NGJ0 315 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 PRELID3AQ96N28 172 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 TIMM21Q9BVV7 248 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 SMIM2Q9BVW6 85 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 CDC42SE2Q9NRR3 84 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 MYCBP2O75592 4640 aa4.02□□□□□ -1.77
HOXB3-209ENST00000478644 S100PP25815 95 aa4.01□□□□□ -1.77
HOXB3-209ENST00000478644 HAMPP81172 84 aa4.01□□□□□ -1.77
HOXB3-209ENST00000478644 ZNF664Q8N3J9 261 aa4.01□□□□□ -1.77
HOXB3-209ENST00000478644 UBE2D4Q9Y2X8 147 aa4.01□□□□□ -1.77
HOXB3-209ENST00000478644 FAT1Q14517 4588 aa4.01□□□□□ -1.77
HOXB3-209ENST00000478644 IGLV4-3A0A075B6K6 122 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 LINC00959A0A1B0GUT2 108 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 KRTAP10-4P60372 401 aaPredicted RBP4□□□□□ -1.77
HOXB3-209ENST00000478644 SS18Q15532 418 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 FAM19A5Q7Z5A7 132 aaPredicted RBP4□□□□□ -1.77
HOXB3-209ENST00000478644 Q8N8P6 123 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 GNB1LQ9BYB4 327 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 MAP1LC3AQ9H492 121 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 SPANXA1Q9NS26 97 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 PLAC8Q9NZF1 115 aa4□□□□□ -1.77
HOXB3-209ENST00000478644 GVQW2A0A096LPI5 108 aaPredicted RBP3.99□□□□□ -1.77
HOXB3-209ENST00000478644 IGHV1-58A0A0C4DH39 117 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 C1orf196B1AJZ1 125 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 K7EMI3 77 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 MRPS36P82909 103 aaKnown RBP3.99□□□□□ -1.77
HOXB3-209ENST00000478644 SVBPQ8N300 66 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 SPACA4Q8TDM5 124 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 FAM104AQ969W3 186 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 RPS10P5Q9NQ39 176 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 PYGO1Q9Y3Y4 419 aa3.99□□□□□ -1.77
HOXB3-209ENST00000478644 IGKV3OR2-268A0A0C4DH90 116 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 LOC389332A0A1B0GUA5 103 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 SNAPINO95295 136 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 APOMO95445 188 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 APOC3P02656 99 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 MT-ND6P03923 174 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 RPL39P62891 51 aaKnown RBP3.98□□□□□ -1.77
HOXB3-209ENST00000478644 PRR3P79522 188 aaKnown RBP3.98□□□□□ -1.77
HOXB3-209ENST00000478644 NDUFA5Q16718 116 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 C4orf26Q17RF5 130 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 ORMDL2Q53FV1 153 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 ADAMTSL4-AS1Q5T5F5 129 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 REG3GQ6UW15 175 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 Q6ZVH6 145 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 NOTCH2NLQ7Z3S9 236 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 SMIM29Q86T20 159 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 C15orf56Q8N910 161 aa3.98□□□□□ -1.77
HOXB3-209ENST00000478644 NXT2Q9NPJ8 142 aaKnown RBP3.98□□□□□ -1.77
HOXB3-209ENST00000478644 IGHV3OR16-9A0A0B4J2B5 98 aa3.97□□□□□ -1.77
HOXB3-209ENST00000478644 LINC01546A6NGU7 62 aa3.97□□□□□ -1.77
HOXB3-209ENST00000478644 XCL1P47992 114 aa3.97□□□□□ -1.77
HOXB3-209ENST00000478644 SPINK6Q6UWN8 80 aa3.97□□□□□ -1.77
HOXB3-209ENST00000478644 Q6ZUT4 128 aa3.97□□□□□ -1.77
HOXB3-209ENST00000478644 FLG2Q5D862 2391 aaPredicted RBP3.97□□□□□ -1.77
HOXB3-209ENST00000478644 TRAV13-1A0A0B4J241 112 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 IGIPA6NJ69 53 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 IFI27P40305 119 aaPredicted RBP3.96□□□□□ -1.78
HOXB3-209ENST00000478644 COX6A2Q02221 97 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 FABP9Q0Z7S8 132 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 C2orf66Q6UXQ4 117 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 OPRPNQ99935 248 aaPredicted RBP3.96□□□□□ -1.78
HOXB3-209ENST00000478644 CYSLTR1Q9Y271 337 aa3.96□□□□□ -1.78
HOXB3-209ENST00000478644 IGLV4-69A0A075B6H9 119 aa3.95□□□□□ -1.78
HOXB3-209ENST00000478644 TGIF2-C20orf24A0A0A6YYL0 155 aa3.95□□□□□ -1.78
HOXB3-209ENST00000478644 LOC107984640A0A0U1RRK4 108 aa3.95□□□□□ -1.78
HOXB3-209ENST00000478644 LINC01549A6NIU2 74 aa3.95□□□□□ -1.78
HOXB3-209ENST00000478644 RPL37AP8A6NKH3 93 aa3.95□□□□□ -1.78
HOXB3-209ENST00000478644 COX7A2LO14548 114 aa3.95□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms