RNA–Protein interactions for RNA: ENST00000477702.1

LINC00173-202, long intergenic non-protein coding RNA 173, humanhuman

TSL 3

Gene LINC00173, Length 314 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-202ENST00000477702 ESDP10768 282 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 SPAG11BQ08648 103 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 NDUFA5Q16718 116 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 C5orf38Q86SI9 138 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 RPS10P5Q9NQ39 176 aa3.39□□□□□ -1.87
LINC00173-202ENST00000477702 IGKV2D-26A0A0A0MRZ7 120 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 A0A1B0GVG6 124 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 RAB19A4D1S5 217 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 RPL37AP8A6NKH3 93 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 A8MWL6 223 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 I3L3M4 83 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 PPP1R17O96001 155 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 RPL28P46779 137 aaKnown RBP3.38□□□□□ -1.87
LINC00173-202ENST00000477702 LINC00242Q5T6M2 205 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 FP248Q71RG6 208 aaPredicted RBP3.38□□□□□ -1.87
LINC00173-202ENST00000477702 MRAP2Q96G30 205 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 IMMP2LQ96T52 175 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 OCR1Q9BZK8 76 aa3.38□□□□□ -1.87
LINC00173-202ENST00000477702 LOC105371267A0A1B0GV96 52 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 SMLR1H3BR10 107 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 FCER1GP30273 86 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 CTRLP40313 264 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 LCE3CQ5T5A8 94 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 UNQ6190/PRO20217Q6UXQ8 127 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 GATD1Q8NB37 220 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 SMDT1Q9H4I9 107 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 ST20Q9HBF5 79 aa3.37□□□□□ -1.87
LINC00173-202ENST00000477702 MRPL35Q9NZE8 188 aaKnown RBP3.37□□□□□ -1.87
LINC00173-202ENST00000477702 FLGP20930 4061 aaPredicted RBP3.37□□□□□ -1.87
LINC00173-202ENST00000477702 C1orf196B1AJZ1 125 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 G3V3Q6 166 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 GATCO43716 136 aaKnown RBP3.36□□□□□ -1.87
LINC00173-202ENST00000477702 NUPR1O60356 82 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 RIGQ13278 110 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 FAM229BQ4G0N7 80 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 RNASE13Q5GAN3 156 aaKnown RBP3.36□□□□□ -1.87
LINC00173-202ENST00000477702 C9orf129Q5T035 196 aaKnown RBP3.36□□□□□ -1.87
LINC00173-202ENST00000477702 LCE1EQ5T753 118 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 KIR2DL4Q99706 377 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 CNFNQ9BYD5 112 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 C6orf48Q9UBA6 75 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 UBE2D4Q9Y2X8 147 aa3.36□□□□□ -1.87
LINC00173-202ENST00000477702 IGLV8-61A0A075B6I0 122 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 TRAV13-1A0A0B4J241 112 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 A0A1B0GUT8 65 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 NDUFA1O15239 70 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 TCAPO15273 167 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 BCE1O60756 84 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 CEBPGP53567 150 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 SLC51BQ86UW2 128 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 C3orf22Q8N5N4 141 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 ORAOV1Q8WV07 137 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 RPL39LQ96EH5 51 aaKnown RBP3.35□□□□□ -1.87
LINC00173-202ENST00000477702 RNASE7Q9H1E1 156 aaKnown RBP3.35□□□□□ -1.87
LINC00173-202ENST00000477702 CDC42SE2Q9NRR3 84 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 C22orf24Q9Y442 160 aa3.35□□□□□ -1.87
LINC00173-202ENST00000477702 TRBV6-5A0A0K0K1A5 114 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 C7orf77A4D0Y5 90 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 TMEM250H0YL14 139 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 PPP1R2P9O14990 202 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 TLX1NBP0CAT3 122 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 PCOTHQ58A44 107 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.87
LINC00173-202ENST00000477702 TRBV20OR9-2A0A075B6H5 130 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 F8WDY8 70 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 TMEM241Q24JQ0 296 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 FAM231DQ6ZW35 169 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 MRPL52Q86TS9 123 aaKnown RBP3.33□□□□□ -1.88
LINC00173-202ENST00000477702 OR10D4PQ8NGN7 298 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 EIF5A2Q9GZV4 153 aaKnown RBP3.33□□□□□ -1.88
LINC00173-202ENST00000477702 TMEM191AQ9H0A3 160 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 TMEM242Q9NWH2 141 aa3.33□□□□□ -1.88
LINC00173-202ENST00000477702 CSDC2Q9Y534 153 aaKnown RBP3.33□□□□□ -1.88
LINC00173-202ENST00000477702 TRBV27A0A0K0K1C4 114 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 HIGD1CA8MV81 97 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 UBE2AP49459 152 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 FOXA3P55318 350 aaPredicted RBP3.32□□□□□ -1.88
LINC00173-202ENST00000477702 HERV-K104P63124 156 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 DAND5Q8N907 189 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 SMIM7Q9BQ49 75 aa3.32□□□□□ -1.88
LINC00173-202ENST00000477702 NEBP20929 6669 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 A0A1B0GW15 77 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 LINC00862A6NCI5 91 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 ZNF727A8MUV8 499 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 NDUFC2-KCTD14E9PQ53 114 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 K7EN84 100 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 S100A8P05109 93 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 RAB4AP20338 218 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 RAB5AP20339 215 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 POLR2KP53803 58 aaKnown RBP3.31□□□□□ -1.88
LINC00173-202ENST00000477702 S100A12P80511 92 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 SPAG11AQ6PDA7 123 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 C2orf82Q6UX34 121 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 XAGE1AQ9HD64 81 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 OSTCQ9NRP0 149 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 NAT8BQ9UHF3 227 aa3.31□□□□□ -1.88
LINC00173-202ENST00000477702 TGIF2-C20orf24A0A0A6YYL0 155 aa3.3□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms