RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 Q6ZRU5 148 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 Q8IZM0 81 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 LINC00474Q9P2X8 69 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 PCLOQ9Y6V0 5065 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 DNAH8Q96JB1 4490 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 KIAA1109Q2LD37 5005 aa8.43□□□□□ -1.06
TOP3A-205ENST00000477508 CKS1BP61024 79 aa8.42□□□□□ -1.06
TOP3A-205ENST00000477508 TOMM7Q9P0U1 55 aa8.42□□□□□ -1.06
TOP3A-205ENST00000477508 HSPG2P98160 4391 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 LOC107984640A0A0U1RRK4 108 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 SMIM1B2RUZ4 78 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 F8VRH5 84 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 CXCL5P42830 114 aa8.41□□□□□ -1.06
TOP3A-205ENST00000477508 CIRBPQ14011 172 aaKnown RBP8.41□□□□□ -1.06
TOP3A-205ENST00000477508 FABP4P15090 132 aa8.4□□□□□ -1.06
TOP3A-205ENST00000477508 ZNF22P17026 224 aaPredicted RBP8.4□□□□□ -1.06
TOP3A-205ENST00000477508 UNQ6190/PRO20217Q6UXQ8 127 aa8.4□□□□□ -1.06
TOP3A-205ENST00000477508 SCXQ7RTU7 201 aa8.4□□□□□ -1.06
TOP3A-205ENST00000477508 DPH3Q96FX2 82 aa8.4□□□□□ -1.06
TOP3A-205ENST00000477508 MAP1LC3CQ9BXW4 147 aa8.4□□□□□ -1.06
TOP3A-205ENST00000477508 RYR1P21817 5038 aa8.4□□□□□ -1.07
TOP3A-205ENST00000477508 C11orf86A6NJI1 115 aa8.39□□□□□ -1.07
TOP3A-205ENST00000477508 TMEM170BQ5T4T1 132 aa8.39□□□□□ -1.07
TOP3A-205ENST00000477508 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
TOP3A-205ENST00000477508 SPINK8P0C7L1 97 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 TLX1NBP0CAT3 122 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 ODF1Q14990 250 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 Q8N1X5 172 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 CIRBP-AS1Q8TBR5 109 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 SPACA4Q8TDM5 124 aa8.38□□□□□ -1.07
TOP3A-205ENST00000477508 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.38□□□□□ -1.07
TOP3A-205ENST00000477508 IGLV5-39A0A0G2JS06 123 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 H0Y8G0 127 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 PLNP26678 52 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 C10orf25Q5T742 122 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 SFTA2Q6UW10 78 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 C2orf82Q6UX34 121 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 C6orf48Q9UBA6 75 aa8.37□□□□□ -1.07
TOP3A-205ENST00000477508 A0A096LNI7 61 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 IGKV2-24A0A0C4DH68 120 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 CHTF8P0CG12 524 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 PTTG1IPP53801 180 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 HAMPP81172 84 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 MAJINQ3KP22 176 aa8.36□□□□□ -1.07
TOP3A-205ENST00000477508 A0A087WYN8 130 aa8.35□□□□□ -1.07
TOP3A-205ENST00000477508 PANO1I0J062 215 aa8.35□□□□□ -1.07
TOP3A-205ENST00000477508 RPL18AQ02543 176 aaKnown RBP8.35□□□□□ -1.07
TOP3A-205ENST00000477508 GAGE2BQ13066 116 aa8.35□□□□□ -1.07
TOP3A-205ENST00000477508 PLAC8Q9NZF1 115 aa8.35□□□□□ -1.07
TOP3A-205ENST00000477508 TMEM223A0PJW6 202 aa8.34□□□□□ -1.07
TOP3A-205ENST00000477508 NDUFC2-KCTD14E9PQ53 114 aa8.34□□□□□ -1.07
TOP3A-205ENST00000477508 DPM2O94777 84 aa8.34□□□□□ -1.07
TOP3A-205ENST00000477508 EPM2AB3EWF7 344 aa8.33□□□□□ -1.08
TOP3A-205ENST00000477508 SYS1-DBNDD2H3BUS1 97 aa8.33□□□□□ -1.08
TOP3A-205ENST00000477508 SMR3BP02814 79 aaPredicted RBP8.33□□□□□ -1.08
TOP3A-205ENST00000477508 STPG4Q8N801 248 aa8.33□□□□□ -1.08
TOP3A-205ENST00000477508 IGKCP01834 107 aa8.32□□□□□ -1.08
TOP3A-205ENST00000477508 S100A6P06703 90 aa8.32□□□□□ -1.08
TOP3A-205ENST00000477508 PET117Q6UWS5 81 aa8.32□□□□□ -1.08
TOP3A-205ENST00000477508 Q6ZRP5 223 aa8.32□□□□□ -1.08
TOP3A-205ENST00000477508 HERVK_113P61574 105 aa8.31□□□□□ -1.08
TOP3A-205ENST00000477508 PLA2G1BP04054 148 aaKnown RBP8.3□□□□□ -1.08
TOP3A-205ENST00000477508 C9orf116Q5BN46 136 aaPredicted RBP8.3□□□□□ -1.08
TOP3A-205ENST00000477508 Q5VSD8 79 aa8.3□□□□□ -1.08
TOP3A-205ENST00000477508 S100A2P29034 98 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 AKR1D1P51857 326 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 COX17Q14061 63 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 GAGE2EQ4V326 116 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 LINC01545Q5VT33 79 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 C7orf33Q8WU49 177 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 GAGE2DQ9UEU5 116 aa8.29□□□□□ -1.08
TOP3A-205ENST00000477508 C20orf202A1L168 122 aa8.28□□□□□ -1.08
TOP3A-205ENST00000477508 C3orf79P0CE67 100 aa8.28□□□□□ -1.08
TOP3A-205ENST00000477508 KRTDAPP60985 99 aa8.28□□□□□ -1.08
TOP3A-205ENST00000477508 PLEKHB2Q96CS7 222 aa8.28□□□□□ -1.08
TOP3A-205ENST00000477508 PMCHL2Q9BQD1 86 aa8.28□□□□□ -1.08
TOP3A-205ENST00000477508 H3BS24 57 aa8.27□□□□□ -1.09
TOP3A-205ENST00000477508 HIST3H2BBQ8N257 126 aa8.27□□□□□ -1.09
TOP3A-205ENST00000477508 ZNF625Q96I27 306 aaPredicted RBP8.27□□□□□ -1.09
TOP3A-205ENST00000477508 FAT1Q14517 4588 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 A0A1W2PNN7 141 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 LINC00587B1AMM8 73 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 LEPROTO15243 131 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 HERV-K104P63124 156 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 ERG28Q9UKR5 140 aa8.26□□□□□ -1.09
TOP3A-205ENST00000477508 MYMXA0A1B0GTQ4 84 aa8.25□□□□□ -1.09
TOP3A-205ENST00000477508 RPL37AP61513 92 aaKnown RBP8.25□□□□□ -1.09
TOP3A-205ENST00000477508 J3QQQ9 107 aa8.24□□□□□ -1.09
TOP3A-205ENST00000477508 NMUP48645 174 aa8.24□□□□□ -1.09
TOP3A-205ENST00000477508 C9orf129Q5T035 196 aaKnown RBP8.24□□□□□ -1.09
TOP3A-205ENST00000477508 HIST1H2BLQ99880 126 aa8.24□□□□□ -1.09
TOP3A-205ENST00000477508 NDUFA12Q9UI09 145 aa8.24□□□□□ -1.09
TOP3A-205ENST00000477508 VPS13BQ7Z7G8 4022 aa8.24□□□□□ -1.09
TOP3A-205ENST00000477508 E9PLD3 99 aa8.23□□□□□ -1.09
TOP3A-205ENST00000477508 LGALS3P17931 250 aaKnown RBP8.23□□□□□ -1.09
TOP3A-205ENST00000477508 PFN2P35080 140 aa8.23□□□□□ -1.09
TOP3A-205ENST00000477508 XAGE1AQ9HD64 81 aa8.23□□□□□ -1.09
TOP3A-205ENST00000477508 SNRPEP62304 92 aaKnown RBP8.22□□□□□ -1.09
TOP3A-205ENST00000477508 KRTAP4-5Q9BYR2 181 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms