RNA–Protein interactions for RNA: ENST00000477360.2

CLCNKA-205, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 5

Gene CLCNKA, Length 400 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-205ENST00000477360 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 PLAC8Q9NZF1 115 aa7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.89□□□□□ -1.15
CLCNKA-205ENST00000477360 SYS1-DBNDD2H3BUS1 97 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 C3orf79P0CE67 100 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 S100A2P29034 98 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 SPAG11BQ08648 103 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 PET117Q6UWS5 81 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 CDKN2A-AS1Q9UH64 79 aa7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 SRRM2Q9UQ35 2752 aaKnown RBP7.88□□□□□ -1.15
CLCNKA-205ENST00000477360 C11orf86A6NJI1 115 aa7.87□□□□□ -1.15
CLCNKA-205ENST00000477360 ZNF22P17026 224 aaPredicted RBP7.87□□□□□ -1.15
CLCNKA-205ENST00000477360 LINC01545Q5VT33 79 aa7.87□□□□□ -1.15
CLCNKA-205ENST00000477360 ORAOV1Q8WV07 137 aa7.87□□□□□ -1.15
CLCNKA-205ENST00000477360 LOC107984640A0A0U1RRK4 108 aa7.86□□□□□ -1.15
CLCNKA-205ENST00000477360 PLNP26678 52 aa7.86□□□□□ -1.15
CLCNKA-205ENST00000477360 HAMPP81172 84 aa7.86□□□□□ -1.15
CLCNKA-205ENST00000477360 LINC00469Q8N7U9 141 aa7.86□□□□□ -1.15
CLCNKA-205ENST00000477360 A0A087WYN8 130 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 LOC105371267A0A1B0GV96 52 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 SMIM1B2RUZ4 78 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 H3BRM9 83 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 PANO1I0J062 215 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 NDUFA1O15239 70 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 TLX1NBP0CAT3 122 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 INAFM2P0DMQ5 153 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 AKR1D1P51857 326 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 Q6ZRU5 148 aa7.85□□□□□ -1.15
CLCNKA-205ENST00000477360 IGLV5-39A0A0G2JS06 123 aa7.84□□□□□ -1.15
CLCNKA-205ENST00000477360 TRBV30A0A0K0K1B3 111 aa7.84□□□□□ -1.15
CLCNKA-205ENST00000477360 H0Y8G0 127 aa7.84□□□□□ -1.15
CLCNKA-205ENST00000477360 DPM2O94777 84 aa7.84□□□□□ -1.15
CLCNKA-205ENST00000477360 KIAA0087Q14695 138 aa7.84□□□□□ -1.15
CLCNKA-205ENST00000477360 A0A096LNI7 61 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 IGKCP01834 107 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 PTTG1IPP53801 180 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 KRTDAPP60985 99 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 Q8IZM0 81 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 LINC00526Q96FQ7 95 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
CLCNKA-205ENST00000477360 TMEM223A0PJW6 202 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 C20orf202A1L168 122 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 CHTF8P0CG12 524 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 CXCL5P42830 114 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 KRTAP10-4P60372 401 aaPredicted RBP7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 MAJINQ3KP22 176 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 TMEM170BQ5T4T1 132 aa7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 TMA7Q9Y2S6 64 aaKnown RBP7.82□□□□□ -1.16
CLCNKA-205ENST00000477360 STPG4Q8N801 248 aa7.81□□□□□ -1.16
CLCNKA-205ENST00000477360 C7orf33Q8WU49 177 aa7.81□□□□□ -1.16
CLCNKA-205ENST00000477360 IGKV2-24A0A0C4DH68 120 aa7.8□□□□□ -1.16
CLCNKA-205ENST00000477360 PRSS2P07478 247 aa7.8□□□□□ -1.16
CLCNKA-205ENST00000477360 SPINK8P0C7L1 97 aa7.8□□□□□ -1.16
CLCNKA-205ENST00000477360 RPL37AP61513 92 aaKnown RBP7.8□□□□□ -1.16
CLCNKA-205ENST00000477360 PMCHL2Q9BQD1 86 aa7.8□□□□□ -1.16
CLCNKA-205ENST00000477360 CKS1BP61024 79 aa7.79□□□□□ -1.16
CLCNKA-205ENST00000477360 C6orf226Q5I0X4 101 aa7.79□□□□□ -1.16
CLCNKA-205ENST00000477360 UNQ6190/PRO20217Q6UXQ8 127 aa7.79□□□□□ -1.16
CLCNKA-205ENST00000477360 COX7B2Q8TF08 81 aa7.79□□□□□ -1.16
CLCNKA-205ENST00000477360 HERVK_113P61574 105 aa7.78□□□□□ -1.16
CLCNKA-205ENST00000477360 SFTA2Q6UW10 78 aa7.78□□□□□ -1.16
CLCNKA-205ENST00000477360 C6orf48Q9UBA6 75 aa7.78□□□□□ -1.16
CLCNKA-205ENST00000477360 NDUFC2-KCTD14E9PQ53 114 aa7.77□□□□□ -1.17
CLCNKA-205ENST00000477360 GAGE2BQ13066 116 aa7.77□□□□□ -1.17
CLCNKA-205ENST00000477360 C10orf25Q5T742 122 aa7.77□□□□□ -1.17
CLCNKA-205ENST00000477360 TOMM7Q9P0U1 55 aa7.77□□□□□ -1.17
CLCNKA-205ENST00000477360 DMBT1Q9UGM3 2413 aaPredicted RBP7.76□□□□□ -1.17
CLCNKA-205ENST00000477360 E9PLD3 99 aa7.76□□□□□ -1.17
CLCNKA-205ENST00000477360 PLEKHB2Q96CS7 222 aa7.76□□□□□ -1.17
CLCNKA-205ENST00000477360 LEPROTO15243 131 aa7.75□□□□□ -1.17
CLCNKA-205ENST00000477360 RPL18AQ02543 176 aaKnown RBP7.75□□□□□ -1.17
CLCNKA-205ENST00000477360 Q6ZRP5 223 aa7.75□□□□□ -1.17
CLCNKA-205ENST00000477360 FLG2Q5D862 2391 aaPredicted RBP7.75□□□□□ -1.17
CLCNKA-205ENST00000477360 KRTAP29-1A8MX34 341 aaPredicted RBP7.74□□□□□ -1.17
CLCNKA-205ENST00000477360 OXTP01178 125 aa7.74□□□□□ -1.17
CLCNKA-205ENST00000477360 JOSD1Q15040 202 aaPredicted RBP7.74□□□□□ -1.17
CLCNKA-205ENST00000477360 C2orf82Q6UX34 121 aa7.74□□□□□ -1.17
CLCNKA-205ENST00000477360 ZNF625Q96I27 306 aaPredicted RBP7.74□□□□□ -1.17
CLCNKA-205ENST00000477360 NMUP48645 174 aa7.73□□□□□ -1.17
CLCNKA-205ENST00000477360 C9orf116Q5BN46 136 aaPredicted RBP7.73□□□□□ -1.17
CLCNKA-205ENST00000477360 MYCBP2O75592 4640 aa7.73□□□□□ -1.17
CLCNKA-205ENST00000477360 A0A1W2PNN7 141 aa7.72□□□□□ -1.17
CLCNKA-205ENST00000477360 J3QQQ9 107 aa7.72□□□□□ -1.17
CLCNKA-205ENST00000477360 SCGB1D1O95968 90 aa7.71□□□□□ -1.18
CLCNKA-205ENST00000477360 TSPEAR-AS2P59090 65 aa7.71□□□□□ -1.18
CLCNKA-205ENST00000477360 HERV-K104P63124 156 aa7.71□□□□□ -1.18
CLCNKA-205ENST00000477360 PRR3P79522 188 aaKnown RBP7.71□□□□□ -1.18
CLCNKA-205ENST00000477360 MYMXA0A1B0GTQ4 84 aa7.7□□□□□ -1.18
CLCNKA-205ENST00000477360 COX17Q14061 63 aa7.7□□□□□ -1.18
CLCNKA-205ENST00000477360 ATOH7Q8N100 152 aa7.7□□□□□ -1.18
CLCNKA-205ENST00000477360 NDUFA12Q9UI09 145 aa7.7□□□□□ -1.18
CLCNKA-205ENST00000477360 LGALS3P17931 250 aaKnown RBP7.69□□□□□ -1.18
CLCNKA-205ENST00000477360 ANKRD39Q53RE8 183 aa7.69□□□□□ -1.18
CLCNKA-205ENST00000477360 IGKV2D-26A0A0A0MRZ7 120 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 LINC00587B1AMM8 73 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 GAGE2EQ4V326 116 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 PYY3Q5JQD4 70 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 GAGE2DQ9UEU5 116 aa7.68□□□□□ -1.18
CLCNKA-205ENST00000477360 TP73-AS1Q9UF72 201 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms