RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
VPS50-211ENST00000474412 CSDC2Q9Y534 153 aaKnown RBP4.3□□□□□ -1.72
VPS50-211ENST00000474412 IGLV4-3A0A075B6K6 122 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 A0A1W2PNN7 141 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 C1orf196B1AJZ1 125 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 PPP1R17O96001 155 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 OXTP01178 125 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 RPL18AQ02543 176 aaKnown RBP4.29□□□□□ -1.72
VPS50-211ENST00000474412 ATP5L2Q7Z4Y8 100 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 ORMDL3Q8N138 153 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 ORAOV1Q8WV07 137 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 DPH3Q96FX2 82 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 CAMK2N2Q96S95 79 aa4.29□□□□□ -1.72
VPS50-211ENST00000474412 IGHV3OR16-9A0A0B4J2B5 98 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 F8W036 122 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 S100A8P05109 93 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 CLLU1Q5K131 121 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 TMEM136Q6ZRR5 245 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 C7orf33Q8WU49 177 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 SPANXA1Q9NS26 97 aa4.28□□□□□ -1.72
VPS50-211ENST00000474412 HMCN2Q8NDA2 5059 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 TNXBP22105 4242 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 LOC107984640A0A0U1RRK4 108 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 FAM168BA1KXE4 195 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 APOMO95445 188 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 PPBPP02775 128 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
VPS50-211ENST00000474412 LINC00242Q5T6M2 205 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 PHF5AQ7RTV0 110 aaKnown RBP4.27□□□□□ -1.73
VPS50-211ENST00000474412 KRTAP11-1Q8IUC1 163 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 IMMP2LQ96T52 175 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 MAP1LC3AQ9H492 121 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 C6orf48Q9UBA6 75 aa4.27□□□□□ -1.73
VPS50-211ENST00000474412 IFI27P40305 119 aaPredicted RBP4.26□□□□□ -1.73
VPS50-211ENST00000474412 RAB14P61106 215 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 KIAA0087Q14695 138 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 C9orf116Q5BN46 136 aaPredicted RBP4.26□□□□□ -1.73
VPS50-211ENST00000474412 C2orf82Q6UX34 121 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 C2orf66Q6UXQ4 117 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 UNQ6190/PRO20217Q6UXQ8 127 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 C2orf48Q96LS8 159 aa4.26□□□□□ -1.73
VPS50-211ENST00000474412 MT-ND4LP03901 98 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 UBE2D1P51668 147 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 SMAGPQ0VAQ4 97 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 LCE3CQ5T5A8 94 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 Q6ZRP5 223 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 Q8N8P6 123 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 OR10D4PQ8NGN7 298 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 TMEM141Q96I45 108 aa4.25□□□□□ -1.73
VPS50-211ENST00000474412 A0A087WZ39 114 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 TGIF2-C20orf24A0A0A6YYL0 155 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 TMEM218A2RU14 115 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 NDUFA1O15239 70 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 RAB5AP20339 215 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 DSCR10P59022 87 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 TEX43Q6ZNM6 134 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 FAM19A5Q7Z5A7 132 aaPredicted RBP4.24□□□□□ -1.73
VPS50-211ENST00000474412 COMMD7Q86VX2 200 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 AMELXQ99217 191 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 MRPL35Q9NZE8 188 aaKnown RBP4.24□□□□□ -1.73
VPS50-211ENST00000474412 PSORS1C2Q9UIG4 136 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 CYSLTR1Q9Y271 337 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 LAMTOR2Q9Y2Q5 125 aa4.24□□□□□ -1.73
VPS50-211ENST00000474412 IGIPA6NJ69 53 aa4.23□□□□□ -1.73
VPS50-211ENST00000474412 LINC00474Q9P2X8 69 aa4.23□□□□□ -1.73
VPS50-211ENST00000474412 SRSF9Q13242 221 aaKnown RBP eCLIP4.22□□□□□ -1.73
VPS50-211ENST00000474412 C9orf129Q5T035 196 aaKnown RBP4.22□□□□□ -1.73
VPS50-211ENST00000474412 UQCC3Q6UW78 93 aa4.22□□□□□ -1.73
VPS50-211ENST00000474412 LINC01600Q96MT4 127 aa4.22□□□□□ -1.73
VPS50-211ENST00000474412 TOMM7Q9P0U1 55 aa4.22□□□□□ -1.73
VPS50-211ENST00000474412 CDKN2A-AS1Q9UH64 79 aa4.22□□□□□ -1.73
VPS50-211ENST00000474412 PKIGQ9Y2B9 76 aa4.22□□□□□ -1.73
VPS50-211ENST00000474412 A0A096LNJ9 63 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 M0QXV9 152 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 TLX1NBP0CAT3 122 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 ORMDL2Q53FV1 153 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 C1orf137Q5JT78 98 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 LINC00469Q8N7U9 141 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 TOMM6Q96B49 74 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 C2orf88Q9BSF0 95 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 SEC11CQ9BY50 192 aa4.21□□□□□ -1.74
VPS50-211ENST00000474412 NXT2Q9NPJ8 142 aaKnown RBP4.21□□□□□ -1.74
VPS50-211ENST00000474412 MT-ND6P03923 174 aa4.2□□□□□ -1.74
VPS50-211ENST00000474412 SPINK6Q6UWN8 80 aa4.2□□□□□ -1.74
VPS50-211ENST00000474412 Q6ZN92 141 aa4.2□□□□□ -1.74
VPS50-211ENST00000474412 FAM19A3Q7Z5A8 133 aa4.2□□□□□ -1.74
VPS50-211ENST00000474412 TIMM17AQ99595 171 aa4.2□□□□□ -1.74
VPS50-211ENST00000474412 ALKBH7Q9BT30 221 aaPredicted RBP4.2□□□□□ -1.74
VPS50-211ENST00000474412 TRAV9-1A0A075B6T8 112 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 TRBV30A0A0K0K1B3 111 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 PMCHL1Q16048 86 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 C10orf91Q5T1B1 145 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 VCX2Q9H322 139 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 XAGE1AQ9HD64 81 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 RPS10P5Q9NQ39 176 aa4.19□□□□□ -1.74
VPS50-211ENST00000474412 CARHSP1Q9Y2V2 147 aaKnown RBP4.19□□□□□ -1.74
VPS50-211ENST00000474412 LINC01546A6NGU7 62 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 NDUFC2-KCTD14E9PQ53 114 aa4.18□□□□□ -1.74
VPS50-211ENST00000474412 K7EMI3 77 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms