RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SFTA2Q6UW10 78 aa5.47□□□□□ -1.53
CNN3-205ENST00000474409 LINC00336Q6ZUF6 198 aa5.47□□□□□ -1.53
CNN3-205ENST00000474409 NTN5Q8WTR8 489 aaPredicted RBP5.47□□□□□ -1.53
CNN3-205ENST00000474409 C2orf48Q96LS8 159 aa5.47□□□□□ -1.53
CNN3-205ENST00000474409 CARD19Q96LW7 228 aa5.47□□□□□ -1.53
CNN3-205ENST00000474409 NDUFA12Q9UI09 145 aa5.47□□□□□ -1.53
CNN3-205ENST00000474409 MYMXA0A1B0GTQ4 84 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 ZNF815PA8K554 130 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 F8WDY8 70 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 SYCNQ0VAF6 134 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 KIAA0087Q14695 138 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 C2orf82Q6UX34 121 aa5.46□□□□□ -1.54
CNN3-205ENST00000474409 MEIG1Q5JSS6 88 aa5.45□□□□□ -1.54
CNN3-205ENST00000474409 Q6ZRU5 148 aa5.45□□□□□ -1.54
CNN3-205ENST00000474409 TTTY13Q9BZ97 58 aa5.45□□□□□ -1.54
CNN3-205ENST00000474409 FAT2Q9NYQ8 4349 aa5.45□□□□□ -1.54
CNN3-205ENST00000474409 RYR3Q15413 4870 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 IGLV5-52A0A0A0MRZ9 124 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 TRBV30A0A0K0K1B3 111 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 CNBPP62633 177 aaKnown RBP5.44□□□□□ -1.54
CNN3-205ENST00000474409 HERV-K104P63124 156 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 UNQ6190/PRO20217Q6UXQ8 127 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 SCGB1D4Q6XE38 83 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 PCP2Q8IVA1 136 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 ZNF625Q96I27 306 aaPredicted RBP5.44□□□□□ -1.54
CNN3-205ENST00000474409 C12orf57Q99622 126 aa5.44□□□□□ -1.54
CNN3-205ENST00000474409 COX8AP10176 69 aa5.43□□□□□ -1.54
CNN3-205ENST00000474409 C10orf25Q5T742 122 aa5.43□□□□□ -1.54
CNN3-205ENST00000474409 C6orf48Q9UBA6 75 aa5.43□□□□□ -1.54
CNN3-205ENST00000474409 ERG28Q9UKR5 140 aa5.43□□□□□ -1.54
CNN3-205ENST00000474409 PKIGQ9Y2B9 76 aa5.43□□□□□ -1.54
CNN3-205ENST00000474409 SLPIP03973 132 aa5.42□□□□□ -1.54
CNN3-205ENST00000474409 RPL18AQ02543 176 aaKnown RBP5.42□□□□□ -1.54
CNN3-205ENST00000474409 C14orf144Q96I85 54 aa5.42□□□□□ -1.54
CNN3-205ENST00000474409 TP73-AS1Q9UF72 201 aa5.42□□□□□ -1.54
CNN3-205ENST00000474409 DNAH5Q8TE73 4624 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 A0A0J9YXY3 114 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 A0A0U1RRA0 63 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 LINC00587B1AMM8 73 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 PFN2P35080 140 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 FUSP35637 526 aaKnown RBP eCLIP5.41□□□□□ -1.54
CNN3-205ENST00000474409 CIRBPQ14011 172 aaKnown RBP5.41□□□□□ -1.54
CNN3-205ENST00000474409 RNF151Q2KHN1 245 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 C9orf116Q5BN46 136 aaPredicted RBP5.41□□□□□ -1.54
CNN3-205ENST00000474409 SLC25A34Q6PIV7 304 aa5.41□□□□□ -1.54
CNN3-205ENST00000474409 LOC107984640A0A0U1RRK4 108 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 TMEM238C9JI98 176 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 NDUFC2-KCTD14E9PQ53 114 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 SMIM13P0DJ93 91 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 LINC00158P58513 81 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 BOD1L2Q8IYS8 172 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 LINC00518Q8N0U6 118 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 C9orf163Q8N9P6 203 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 PRO1933Q9H354 126 aa5.4□□□□□ -1.54
CNN3-205ENST00000474409 DNAH11Q96DT5 4516 aa5.4□□□□□ -1.55
CNN3-205ENST00000474409 PKD1P98161 4303 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 TSTD3H0UI37 97 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 DLEU1O43261 78 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 KRTAP10-2P60368 255 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 GAGE2BQ13066 116 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 COX17Q14061 63 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 LINC01620Q4KN68 170 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 UQCR10Q9UDW1 63 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 HECTD4Q9Y4D8 3996 aa5.39□□□□□ -1.55
CNN3-205ENST00000474409 IGKV2-24A0A0C4DH68 120 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 A0A1B0GVY2 172 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 TIMM17BO60830 172 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 TLX1NBP0CAT3 122 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 GAGE2EQ4V326 116 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 MIR7-3HGQ8N6C7 128 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 DAND5Q8N907 189 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 MIEN1Q9BRT3 115 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 PGPEP1Q9NXJ5 209 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 GAGE2DQ9UEU5 116 aa5.38□□□□□ -1.55
CNN3-205ENST00000474409 C16orf90A8MZG2 172 aa5.37□□□□□ -1.55
CNN3-205ENST00000474409 GCSHP23434 173 aa5.37□□□□□ -1.55
CNN3-205ENST00000474409 HNRNPA3P51991 378 aaKnown RBP5.37□□□□□ -1.55
CNN3-205ENST00000474409 NPC2P61916 151 aa5.37□□□□□ -1.55
CNN3-205ENST00000474409 Q6ZRP5 223 aa5.37□□□□□ -1.55
CNN3-205ENST00000474409 A0A096LNI7 61 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 PTTG1IPP53801 180 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 SRSF9Q13242 221 aaKnown RBP eCLIP5.36□□□□□ -1.55
CNN3-205ENST00000474409 C2orf91Q6ZV80 131 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 COPS9Q8WXC6 57 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 LITAFQ99732 161 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 SPANXDQ9BXN6 97 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 SND1-IT1Q9HBX3 110 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 XAGE1AQ9HD64 81 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 SPANXB1Q9NS25 103 aaPredicted RBP5.36□□□□□ -1.55
CNN3-205ENST00000474409 SPANXCQ9NY87 97 aa5.36□□□□□ -1.55
CNN3-205ENST00000474409 CHTF8P0CG12 524 aa5.35□□□□□ -1.55
CNN3-205ENST00000474409 ADAMTSL4-AS1Q5T5F5 129 aa5.35□□□□□ -1.55
CNN3-205ENST00000474409 HIST1H4GQ99525 98 aa5.35□□□□□ -1.55
CNN3-205ENST00000474409 HIGD1BQ9P298 99 aa5.35□□□□□ -1.55
CNN3-205ENST00000474409 LINC00474Q9P2X8 69 aa5.35□□□□□ -1.55
CNN3-205ENST00000474409 SDIM1Q6ZPB5 146 aa5.34□□□□□ -1.55
CNN3-205ENST00000474409 Q6ZVH6 145 aa5.34□□□□□ -1.55
CNN3-205ENST00000474409 PKHD1P08F94 4074 aa5.33□□□□□ -1.56
CNN3-205ENST00000474409 IFITM1P13164 125 aa5.33□□□□□ -1.56
CNN3-205ENST00000474409 HSD52Q0P140 79 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 123.5 ms