RNA–Protein interactions for RNA: ENST00000474258.1

SEMA4D-216, Transcript of semaphorin 4D, humanhuman

TSL 4

Gene SEMA4D, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-216ENST00000474258 CFAP161Q6P656 301 aa7.07□□□□□ -1.28
SEMA4D-216ENST00000474258 VAMP8Q9BV40 100 aa7.07□□□□□ -1.28
SEMA4D-216ENST00000474258 PKHD1L1Q86WI1 4243 aa7.07□□□□□ -1.28
SEMA4D-216ENST00000474258 A0A0J9YXV3 536 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 TINCRA0A1B0GVN0 87 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 C11orf86A6NJI1 115 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 SLPIP03973 132 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 HNRNPA3P51991 378 aaKnown RBP7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 MAJINQ3KP22 176 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 RNASE13Q5GAN3 156 aaKnown RBP7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 FAT3Q8TDW7 4589 aa7.06□□□□□ -1.28
SEMA4D-216ENST00000474258 IGLV5-45A0A087WSX0 123 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 GAGE12HA6NDE8 117 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 HSBP1L1C9JCN9 74 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 CCL25O15444 150 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 SEC11AP67812 179 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 LINC00242Q5T6M2 205 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 STPG4Q8N801 248 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 PAM16Q9Y3D7 125 aa7.05□□□□□ -1.28
SEMA4D-216ENST00000474258 A0A087WYN8 130 aa7.04□□□□□ -1.28
SEMA4D-216ENST00000474258 SPATA45Q537H7 98 aa7.04□□□□□ -1.28
SEMA4D-216ENST00000474258 ANKRD39Q53RE8 183 aa7.04□□□□□ -1.28
SEMA4D-216ENST00000474258 TRAV13-1A0A0B4J241 112 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 LINC00959A0A1B0GUT2 108 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 CHTF8P0CG12 524 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 ZNF22P17026 224 aaPredicted RBP7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 HERVK_113P63121 156 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 Q6ZRU5 148 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 C15orf56Q8N910 161 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 SPACA4Q8TDM5 124 aa7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 CHCHD10Q8WYQ3 142 aaPredicted RBP7.03□□□□□ -1.28
SEMA4D-216ENST00000474258 TMEM223A0PJW6 202 aa7.02□□□□□ -1.29
SEMA4D-216ENST00000474258 COX6A2Q02221 97 aa7.02□□□□□ -1.29
SEMA4D-216ENST00000474258 GEMIN7Q9H840 131 aaKnown RBP7.02□□□□□ -1.29
SEMA4D-216ENST00000474258 PLA2G2DQ9UNK4 145 aa7.02□□□□□ -1.29
SEMA4D-216ENST00000474258 E9PLD3 99 aa7.01□□□□□ -1.29
SEMA4D-216ENST00000474258 HIGD2BQ4VC39 106 aa7.01□□□□□ -1.29
SEMA4D-216ENST00000474258 TMEM170BQ5T4T1 132 aa7.01□□□□□ -1.29
SEMA4D-216ENST00000474258 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
SEMA4D-216ENST00000474258 IGKV2D-26A0A0A0MRZ7 120 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 IGHV3OR16-9A0A0B4J2B5 98 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 H3BRM9 83 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 DLEU1O43261 78 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 COX8AP10176 69 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 HERVK_113P61574 105 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 SS18Q15532 418 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 C7orf33Q8WU49 177 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 MIEN1Q9BRT3 115 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 PRO1933Q9H354 126 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 CDKN2A-AS1Q9UH64 79 aa7□□□□□ -1.29
SEMA4D-216ENST00000474258 GVQW2A0A096LPI5 108 aaPredicted RBP6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 IGHV1-58A0A0C4DH39 117 aa6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 TSTD3H0UI37 97 aa6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 FOXI1Q12951 378 aa6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 LINC01561Q8N1V8 128 aa6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 LINC00469Q8N7U9 141 aa6.99□□□□□ -1.29
SEMA4D-216ENST00000474258 A0A087WZ39 114 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 IGKV2-24A0A0C4DH68 120 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 IGLV5-39A0A0G2JS06 123 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 LEPROTO15243 131 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 MT1HL1P0DM35 61 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 CD164L2Q6UWJ8 174 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 BOD1L2Q8IYS8 172 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 C14orf144Q96I85 54 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 UQCR10Q9UDW1 63 aa6.98□□□□□ -1.29
SEMA4D-216ENST00000474258 XCL1P47992 114 aa6.97□□□□□ -1.29
SEMA4D-216ENST00000474258 PCP2Q8IVA1 136 aa6.97□□□□□ -1.29
SEMA4D-216ENST00000474258 PLEKHB2Q96CS7 222 aa6.97□□□□□ -1.29
SEMA4D-216ENST00000474258 PKIGQ9Y2B9 76 aa6.97□□□□□ -1.29
SEMA4D-216ENST00000474258 SMIM1B2RUZ4 78 aa6.96□□□□□ -1.3
SEMA4D-216ENST00000474258 NMUP48645 174 aa6.96□□□□□ -1.3
SEMA4D-216ENST00000474258 SLC25A34Q6PIV7 304 aa6.96□□□□□ -1.3
SEMA4D-216ENST00000474258 LINC00474Q9P2X8 69 aa6.96□□□□□ -1.3
SEMA4D-216ENST00000474258 A0A096LNI7 61 aa6.95□□□□□ -1.3
SEMA4D-216ENST00000474258 J3QQQ9 107 aa6.95□□□□□ -1.3
SEMA4D-216ENST00000474258 SPINK8P0C7L1 97 aa6.95□□□□□ -1.3
SEMA4D-216ENST00000474258 HMCN2Q8NDA2 5059 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 MYMXA0A1B0GTQ4 84 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 ZNF561-AS1K7EIQ3 104 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 DDTP30046 118 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 TSPEAR-AS2P59090 65 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 C5orf38Q86SI9 138 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 LINC00526Q96FQ7 95 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 CARD19Q96LW7 228 aa6.94□□□□□ -1.3
SEMA4D-216ENST00000474258 COX7A2LO14548 114 aa6.93□□□□□ -1.3
SEMA4D-216ENST00000474258 LGALS3P17931 250 aaKnown RBP6.93□□□□□ -1.3
SEMA4D-216ENST00000474258 PRR3P79522 188 aaKnown RBP6.93□□□□□ -1.3
SEMA4D-216ENST00000474258 SYCNQ0VAF6 134 aa6.93□□□□□ -1.3
SEMA4D-216ENST00000474258 TTTY13Q9BZ97 58 aa6.93□□□□□ -1.3
SEMA4D-216ENST00000474258 PCP4L1A6NKN8 68 aa6.92□□□□□ -1.3
SEMA4D-216ENST00000474258 C2orf91Q6ZV80 131 aa6.92□□□□□ -1.3
SEMA4D-216ENST00000474258 HIGD1BQ9P298 99 aa6.92□□□□□ -1.3
SEMA4D-216ENST00000474258 ZNF815PA8K554 130 aa6.91□□□□□ -1.3
SEMA4D-216ENST00000474258 MALP21145 153 aa6.91□□□□□ -1.3
SEMA4D-216ENST00000474258 LINC01600Q96MT4 127 aa6.91□□□□□ -1.3
SEMA4D-216ENST00000474258 NDUFA1O15239 70 aa6.9□□□□□ -1.3
SEMA4D-216ENST00000474258 KIAA0087Q14695 138 aa6.9□□□□□ -1.3
SEMA4D-216ENST00000474258 COX7B2Q8TF08 81 aa6.9□□□□□ -1.3
SEMA4D-216ENST00000474258 ZNF625Q96I27 306 aaPredicted RBP6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms