RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 IGLC3P0DOY3 106 aa11.92□□□□□ -0.5
SYF2-203ENST00000474160 C10orf25Q5T742 122 aa11.92□□□□□ -0.5
SYF2-203ENST00000474160 TRGC2P03986 189 aa11.91□□□□□ -0.5
SYF2-203ENST00000474160 TOMM7Q9P0U1 55 aa11.91□□□□□ -0.5
SYF2-203ENST00000474160 SMIM1B2RUZ4 78 aa11.9□□□□□ -0.5
SYF2-203ENST00000474160 NDUFC2-KCTD14E9PQ53 114 aa11.89□□□□□ -0.51
SYF2-203ENST00000474160 PMCHL1Q16048 86 aa11.89□□□□□ -0.51
SYF2-203ENST00000474160 BAGE3Q86Y29 109 aa11.89□□□□□ -0.51
SYF2-203ENST00000474160 FLG2Q5D862 2391 aaPredicted RBP11.89□□□□□ -0.51
SYF2-203ENST00000474160 COLCA2A8K830 154 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 F8VRH5 84 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 HSBP1O75506 76 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 NDUFA6P56556 154 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 Q6ZRP5 223 aa11.88□□□□□ -0.51
SYF2-203ENST00000474160 C9orf116Q5BN46 136 aaPredicted RBP11.87□□□□□ -0.51
SYF2-203ENST00000474160 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
SYF2-203ENST00000474160 COX7B2Q8TF08 81 aa11.86□□□□□ -0.51
SYF2-203ENST00000474160 A0A1W2PNN7 141 aa11.85□□□□□ -0.51
SYF2-203ENST00000474160 IFI27L1Q96BM0 104 aa11.85□□□□□ -0.51
SYF2-203ENST00000474160 MYCBP2O75592 4640 aa11.85□□□□□ -0.51
SYF2-203ENST00000474160 KRTAP29-1A8MX34 341 aaPredicted RBP11.84□□□□□ -0.51
SYF2-203ENST00000474160 ODF1Q14990 250 aa11.84□□□□□ -0.51
SYF2-203ENST00000474160 IGLV5-39A0A0G2JS06 123 aa11.83□□□□□ -0.52
SYF2-203ENST00000474160 ZNF22P17026 224 aaPredicted RBP11.83□□□□□ -0.52
SYF2-203ENST00000474160 OXTP01178 125 aa11.82□□□□□ -0.52
SYF2-203ENST00000474160 SPINK8P0C7L1 97 aa11.82□□□□□ -0.52
SYF2-203ENST00000474160 PRR3P79522 188 aaKnown RBP11.82□□□□□ -0.52
SYF2-203ENST00000474160 GAGE2EQ4V326 116 aa11.82□□□□□ -0.52
SYF2-203ENST00000474160 SFTA2Q6UW10 78 aa11.82□□□□□ -0.52
SYF2-203ENST00000474160 GAGE2DQ9UEU5 116 aa11.82□□□□□ -0.52
SYF2-203ENST00000474160 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
SYF2-203ENST00000474160 DMBT1Q9UGM3 2413 aaPredicted RBP11.8□□□□□ -0.52
SYF2-203ENST00000474160 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
SYF2-203ENST00000474160 SERF1AO75920 110 aa11.79□□□□□ -0.52
SYF2-203ENST00000474160 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
SYF2-203ENST00000474160 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
SYF2-203ENST00000474160 TMEM170BQ5T4T1 132 aa11.78□□□□□ -0.52
SYF2-203ENST00000474160 FAM19A2Q8N3H0 131 aa11.78□□□□□ -0.52
SYF2-203ENST00000474160 HSPB8Q9UJY1 196 aa11.77□□□□□ -0.53
SYF2-203ENST00000474160 J3QL48 77 aa11.76□□□□□ -0.53
SYF2-203ENST00000474160 HNRNPA3P51991 378 aaKnown RBP11.76□□□□□ -0.53
SYF2-203ENST00000474160 LINC00310P59036 64 aa11.76□□□□□ -0.53
SYF2-203ENST00000474160 C9orf129Q5T035 196 aaKnown RBP11.76□□□□□ -0.53
SYF2-203ENST00000474160 PHF5AQ7RTV0 110 aaKnown RBP11.74□□□□□ -0.53
SYF2-203ENST00000474160 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
SYF2-203ENST00000474160 FAM168BA1KXE4 195 aa11.73□□□□□ -0.53
SYF2-203ENST00000474160 M0QXV9 152 aa11.73□□□□□ -0.53
SYF2-203ENST00000474160 COX17Q14061 63 aa11.73□□□□□ -0.53
SYF2-203ENST00000474160 SPINK6Q6UWN8 80 aa11.73□□□□□ -0.53
SYF2-203ENST00000474160 TMEM223A0PJW6 202 aa11.72□□□□□ -0.53
SYF2-203ENST00000474160 SCO1O75880 301 aa11.72□□□□□ -0.53
SYF2-203ENST00000474160 TP73-AS1Q9UF72 201 aa11.72□□□□□ -0.53
SYF2-203ENST00000474160 PLA2G2DQ9UNK4 145 aa11.72□□□□□ -0.53
SYF2-203ENST00000474160 PSORS1C2Q9UIG4 136 aa11.71□□□□□ -0.53
SYF2-203ENST00000474160 HIST1H2BKO60814 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BJP06899 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BOP23527 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 PLNP26678 52 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BBP33778 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BDP58876 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BCP62807 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST2H2BEQ16778 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 LBHQ53QV2 105 aaPredicted RBP11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.7□□□□□ -0.54
SYF2-203ENST00000474160 KRTAP7-1Q8IUC3 87 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BHQ93079 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BNQ99877 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 HIST1H2BMQ99879 126 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 XAGE1AQ9HD64 81 aa11.7□□□□□ -0.54
SYF2-203ENST00000474160 NUPR1O60356 82 aa11.69□□□□□ -0.54
SYF2-203ENST00000474160 SRSF9Q13242 221 aaKnown RBP eCLIP11.69□□□□□ -0.54
SYF2-203ENST00000474160 FAT3Q8TDW7 4589 aa11.68□□□□□ -0.54
SYF2-203ENST00000474160 ZNF625Q96I27 306 aaPredicted RBP11.68□□□□□ -0.54
SYF2-203ENST00000474160 ERG28Q9UKR5 140 aa11.68□□□□□ -0.54
SYF2-203ENST00000474160 LRP1Q07954 4544 aaKnown RBP11.67□□□□□ -0.54
SYF2-203ENST00000474160 UBE2BP63146 152 aa11.67□□□□□ -0.54
SYF2-203ENST00000474160 C1orf137Q5JT78 98 aa11.67□□□□□ -0.54
SYF2-203ENST00000474160 MAP1LC3CQ9BXW4 147 aa11.67□□□□□ -0.54
SYF2-203ENST00000474160 FABP4P15090 132 aa11.66□□□□□ -0.54
SYF2-203ENST00000474160 S100A1P23297 94 aa11.66□□□□□ -0.54
SYF2-203ENST00000474160 REG3GQ6UW15 175 aa11.66□□□□□ -0.54
SYF2-203ENST00000474160 C22orf24Q9Y442 160 aa11.66□□□□□ -0.54
SYF2-203ENST00000474160 IGLV5-37A0A075B6J1 123 aa11.65□□□□□ -0.54
SYF2-203ENST00000474160 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
SYF2-203ENST00000474160 LINC00587B1AMM8 73 aa11.64□□□□□ -0.55
SYF2-203ENST00000474160 H0Y8G0 127 aa11.64□□□□□ -0.55
SYF2-203ENST00000474160 DPM2O94777 84 aa11.64□□□□□ -0.55
SYF2-203ENST00000474160 HERV-K104P63124 156 aa11.64□□□□□ -0.55
SYF2-203ENST00000474160 IGLV7-43P04211 117 aa11.63□□□□□ -0.55
SYF2-203ENST00000474160 PFN2P35080 140 aa11.63□□□□□ -0.55
SYF2-203ENST00000474160 COA6Q5JTJ3 125 aaKnown RBP11.63□□□□□ -0.55
SYF2-203ENST00000474160 MRPL55Q7Z7F7 128 aaKnown RBP11.63□□□□□ -0.55
SYF2-203ENST00000474160 HERC1Q15751 4861 aa11.62□□□□□ -0.55
SYF2-203ENST00000474160 HERVK_113P61574 105 aa11.62□□□□□ -0.55
SYF2-203ENST00000474160 IGKCP01834 107 aa11.61□□□□□ -0.55
SYF2-203ENST00000474160 PLEKHB2Q96CS7 222 aa11.61□□□□□ -0.55
SYF2-203ENST00000474160 RPL24P83731 157 aaKnown RBP11.6□□□□□ -0.55
SYF2-203ENST00000474160 NKAPP1Q8N9T2 125 aa11.6□□□□□ -0.55
SYF2-203ENST00000474160 DIRC1Q969H9 104 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms