RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 F8VRH5 84 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 SPINK8P0C7L1 97 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 FABP4P15090 132 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 C10orf25Q5T742 122 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 Q8N1X5 172 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 CIRBP-AS1Q8TBR5 109 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 DPH3Q96FX2 82 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 PCLOQ9Y6V0 5065 aa13.27□□□□□ -0.29
TOP3A-204ENST00000472959 TRBV30A0A0K0K1B3 111 aa13.26□□□□□ -0.29
TOP3A-204ENST00000472959 PANO1I0J062 215 aa13.26□□□□□ -0.29
TOP3A-204ENST00000472959 SPACA4Q8TDM5 124 aa13.26□□□□□ -0.29
TOP3A-204ENST00000472959 CHTF8P0CG12 524 aa13.25□□□□□ -0.29
TOP3A-204ENST00000472959 CXCL5P42830 114 aa13.25□□□□□ -0.29
TOP3A-204ENST00000472959 C2orf82Q6UX34 121 aa13.25□□□□□ -0.29
TOP3A-204ENST00000472959 COX7B2Q8TF08 81 aa13.25□□□□□ -0.29
TOP3A-204ENST00000472959 C6orf48Q9UBA6 75 aa13.25□□□□□ -0.29
TOP3A-204ENST00000472959 A0A096LNI7 61 aa13.24□□□□□ -0.29
TOP3A-204ENST00000472959 IGKV2-24A0A0C4DH68 120 aa13.24□□□□□ -0.29
TOP3A-204ENST00000472959 TMEM170BQ5T4T1 132 aa13.24□□□□□ -0.29
TOP3A-204ENST00000472959 IGLV5-39A0A0G2JS06 123 aa13.23□□□□□ -0.29
TOP3A-204ENST00000472959 ODF1Q14990 250 aa13.23□□□□□ -0.29
TOP3A-204ENST00000472959 MAP1LC3CQ9BXW4 147 aa13.23□□□□□ -0.29
TOP3A-204ENST00000472959 H0Y8G0 127 aa13.22□□□□□ -0.29
TOP3A-204ENST00000472959 SMR3BP02814 79 aaPredicted RBP13.22□□□□□ -0.29
TOP3A-204ENST00000472959 TLX1NBP0CAT3 122 aa13.22□□□□□ -0.29
TOP3A-204ENST00000472959 PTTG1IPP53801 180 aa13.22□□□□□ -0.29
TOP3A-204ENST00000472959 MAJINQ3KP22 176 aa13.22□□□□□ -0.29
TOP3A-204ENST00000472959 GAGE2BQ13066 116 aa13.21□□□□□ -0.29
TOP3A-204ENST00000472959 A0A087WYN8 130 aa13.2□□□□□ -0.3
TOP3A-204ENST00000472959 RPL18AQ02543 176 aaKnown RBP13.2□□□□□ -0.3
TOP3A-204ENST00000472959 PLAC8Q9NZF1 115 aa13.19□□□□□ -0.3
TOP3A-204ENST00000472959 FAM229AH3BQW9 127 aa13.18□□□□□ -0.3
TOP3A-204ENST00000472959 PLNP26678 52 aa13.18□□□□□ -0.3
TOP3A-204ENST00000472959 TMEM223A0PJW6 202 aa13.17□□□□□ -0.3
TOP3A-204ENST00000472959 EPM2AB3EWF7 344 aa13.17□□□□□ -0.3
TOP3A-204ENST00000472959 NDUFC2-KCTD14E9PQ53 114 aa13.17□□□□□ -0.3
TOP3A-204ENST00000472959 STPG4Q8N801 248 aa13.17□□□□□ -0.3
TOP3A-204ENST00000472959 DPM2O94777 84 aa13.16□□□□□ -0.3
TOP3A-204ENST00000472959 LINC00528Q8N1L1 170 aa13.16□□□□□ -0.3
TOP3A-204ENST00000472959 SYS1-DBNDD2H3BUS1 97 aa13.15□□□□□ -0.3
TOP3A-204ENST00000472959 C9orf116Q5BN46 136 aaPredicted RBP13.15□□□□□ -0.3
TOP3A-204ENST00000472959 Q5VSD8 79 aa13.15□□□□□ -0.3
TOP3A-204ENST00000472959 Q6ZRP5 223 aa13.15□□□□□ -0.3
TOP3A-204ENST00000472959 SFTA2Q6UW10 78 aa13.14□□□□□ -0.31
TOP3A-204ENST00000472959 IGKCP01834 107 aa13.12□□□□□ -0.31
TOP3A-204ENST00000472959 GAGE2EQ4V326 116 aa13.12□□□□□ -0.31
TOP3A-204ENST00000472959 PET117Q6UWS5 81 aa13.12□□□□□ -0.31
TOP3A-204ENST00000472959 GAGE2DQ9UEU5 116 aa13.12□□□□□ -0.31
TOP3A-204ENST00000472959 PLA2G1BP04054 148 aaKnown RBP13.11□□□□□ -0.31
TOP3A-204ENST00000472959 PMCHL2Q9BQD1 86 aa13.11□□□□□ -0.31
TOP3A-204ENST00000472959 KRTAP4-5Q9BYR2 181 aa13.1□□□□□ -0.31
TOP3A-204ENST00000472959 FAT1Q14517 4588 aa13.09□□□□□ -0.31
TOP3A-204ENST00000472959 LINC01545Q5VT33 79 aa13.09□□□□□ -0.31
TOP3A-204ENST00000472959 A0A1W2PNN7 141 aa13.08□□□□□ -0.32
TOP3A-204ENST00000472959 S100A6P06703 90 aa13.08□□□□□ -0.32
TOP3A-204ENST00000472959 C3orf79P0CE67 100 aa13.08□□□□□ -0.32
TOP3A-204ENST00000472959 HERVK_113P61574 105 aa13.08□□□□□ -0.32
TOP3A-204ENST00000472959 ZNF625Q96I27 306 aaPredicted RBP13.08□□□□□ -0.32
TOP3A-204ENST00000472959 C7orf33Q8WU49 177 aa13.07□□□□□ -0.32
TOP3A-204ENST00000472959 KRTDAPP60985 99 aa13.06□□□□□ -0.32
TOP3A-204ENST00000472959 S100A2P29034 98 aa13.05□□□□□ -0.32
TOP3A-204ENST00000472959 COX17Q14061 63 aa13.05□□□□□ -0.32
TOP3A-204ENST00000472959 HIST3H2BBQ8N257 126 aa13.05□□□□□ -0.32
TOP3A-204ENST00000472959 PLEKHB2Q96CS7 222 aa13.05□□□□□ -0.32
TOP3A-204ENST00000472959 LEPROTO15243 131 aa13.04□□□□□ -0.32
TOP3A-204ENST00000472959 RPL37AP61513 92 aaKnown RBP13.04□□□□□ -0.32
TOP3A-204ENST00000472959 C9orf129Q5T035 196 aaKnown RBP13.04□□□□□ -0.32
TOP3A-204ENST00000472959 ERG28Q9UKR5 140 aa13.04□□□□□ -0.32
TOP3A-204ENST00000472959 XAGE1AQ9HD64 81 aa13.03□□□□□ -0.32
TOP3A-204ENST00000472959 C20orf202A1L168 122 aa13.02□□□□□ -0.33
TOP3A-204ENST00000472959 PFN2P35080 140 aa13.02□□□□□ -0.33
TOP3A-204ENST00000472959 HERV-K104P63124 156 aa13.02□□□□□ -0.33
TOP3A-204ENST00000472959 NDUFA12Q9UI09 145 aa13.02□□□□□ -0.33
TOP3A-204ENST00000472959 FAM168BA1KXE4 195 aa13.01□□□□□ -0.33
TOP3A-204ENST00000472959 HIST1H2BLQ99880 126 aa13.01□□□□□ -0.33
TOP3A-204ENST00000472959 MYMXA0A1B0GTQ4 84 aa13□□□□□ -0.33
TOP3A-204ENST00000472959 J3QQQ9 107 aa13□□□□□ -0.33
TOP3A-204ENST00000472959 AKR1D1P51857 326 aa13□□□□□ -0.33
TOP3A-204ENST00000472959 FAM19A5Q7Z5A7 132 aaPredicted RBP13□□□□□ -0.33
TOP3A-204ENST00000472959 KRTAP10-4P60372 401 aaPredicted RBP12.99□□□□□ -0.33
TOP3A-204ENST00000472959 LINC00587B1AMM8 73 aa12.98□□□□□ -0.33
TOP3A-204ENST00000472959 E9PLD3 99 aa12.98□□□□□ -0.33
TOP3A-204ENST00000472959 NMUP48645 174 aa12.98□□□□□ -0.33
TOP3A-204ENST00000472959 TSPEAR-AS2P59090 65 aa12.98□□□□□ -0.33
TOP3A-204ENST00000472959 SNRPEP62304 92 aaKnown RBP12.98□□□□□ -0.33
TOP3A-204ENST00000472959 LGALS3P17931 250 aaKnown RBP12.97□□□□□ -0.33
TOP3A-204ENST00000472959 KRTAP7-1Q8IUC3 87 aa12.97□□□□□ -0.33
TOP3A-204ENST00000472959 C5orf52A6NGY3 159 aa12.96□□□□□ -0.33
TOP3A-204ENST00000472959 INAFM2P0DMQ5 153 aa12.96□□□□□ -0.33
TOP3A-204ENST00000472959 LINC00158P58513 81 aa12.96□□□□□ -0.33
TOP3A-204ENST00000472959 PHF5AQ7RTV0 110 aaKnown RBP12.96□□□□□ -0.33
TOP3A-204ENST00000472959 PLA2G2DQ9UNK4 145 aa12.96□□□□□ -0.33
TOP3A-204ENST00000472959 VPS13BQ7Z7G8 4022 aa12.95□□□□□ -0.34
TOP3A-204ENST00000472959 M0QXV9 152 aa12.95□□□□□ -0.34
TOP3A-204ENST00000472959 SERTAD4-AS1Q5TG53 156 aa12.95□□□□□ -0.34
TOP3A-204ENST00000472959 SND1-IT1Q9HBX3 110 aa12.95□□□□□ -0.34
TOP3A-204ENST00000472959 MEIG1Q5JSS6 88 aa12.94□□□□□ -0.34
TOP3A-204ENST00000472959 SRRM2Q9UQ35 2752 aaKnown RBP12.94□□□□□ -0.34
TOP3A-204ENST00000472959 SMIM13P0DJ93 91 aa12.92□□□□□ -0.34
TOP3A-204ENST00000472959 PRR3P79522 188 aaKnown RBP12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms