RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 SEC61GP60059 68 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 PIK3CD-AS1Q5SR53 167 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 LINC01561Q8N1V8 128 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 FAM218AQ96MZ4 157 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 RHPN1-AS1Q9BWJ2 59 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 Q9H8V8 135 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 CDKN2A-AS1Q9UH64 79 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 SERP1Q9Y6X1 66 aa7.23□□□□□ -1.25
APTX-216ENST00000472896 A0A1W2PRX2 142 aa7.22□□□□□ -1.25
APTX-216ENST00000472896 SOSTDC1Q6X4U4 206 aa7.22□□□□□ -1.25
APTX-216ENST00000472896 BIRC6Q9NR09 4857 aa7.21□□□□□ -1.25
APTX-216ENST00000472896 TRBV10-3A0A0K0K1G6 114 aa7.21□□□□□ -1.25
APTX-216ENST00000472896 HOXD3P31249 432 aaPredicted RBP7.21□□□□□ -1.25
APTX-216ENST00000472896 LINC00846Q9NV44 126 aa7.21□□□□□ -1.25
APTX-216ENST00000472896 MOB4Q9Y3A3 225 aa7.21□□□□□ -1.25
APTX-216ENST00000472896 TRAV12-2A0A075B6T6 113 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 IGHG2P01859 326 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 PFN2P35080 140 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 LCE2AQ5TA79 106 aaPredicted RBP7.2□□□□□ -1.26
APTX-216ENST00000472896 EPPK1P58107 5090 aaKnown RBP7.2□□□□□ -1.26
APTX-216ENST00000472896 FAM236DA0A1B0GTK5 79 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 CRPP02741 224 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 FAM236CP0DP71 79 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 EGFEM1PQ0D2K5 195 aa7.2□□□□□ -1.26
APTX-216ENST00000472896 RBMY1BA6NDE4 496 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 RBMY1EA6NEQ0 496 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 RBMY1DP0C7P1 496 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 RBMY1A1P0DJD3 496 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 RBMY1CP0DJD4 496 aa7.19□□□□□ -1.26
APTX-216ENST00000472896 RBMY1FQ15415 496 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 RNASE13Q5GAN3 156 aaKnown RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 ZNF625Q96I27 306 aaPredicted RBP7.19□□□□□ -1.26
APTX-216ENST00000472896 Q9HAA7 133 aa7.19□□□□□ -1.26
APTX-216ENST00000472896 C3orf84H3BNL1 204 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 GHRHP01286 108 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 FHL2Q14192 279 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 TMEM243Q9BU79 118 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 C14orf132Q9NPU4 83 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 RYR2Q92736 4967 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 TRBV12-3P01733 135 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 CCKP06307 115 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 BLCAPP62952 87 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 LINC00467Q9BRT7 94 aa7.18□□□□□ -1.26
APTX-216ENST00000472896 IGKV3-7A0A075B6H7 116 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.17□□□□□ -1.26
APTX-216ENST00000472896 A0A087WVE0 104 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 IGKV2-29A2NJV5 120 aaPredicted RBP7.17□□□□□ -1.26
APTX-216ENST00000472896 A6NDX4 124 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 SMIM1B2RUZ4 78 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 SNRPD3P62318 126 aaKnown RBP7.17□□□□□ -1.26
APTX-216ENST00000472896 DGAT2L7PQ6IED9 249 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 LYPD5Q6UWN5 251 aa7.17□□□□□ -1.26
APTX-216ENST00000472896 DYNC2H1Q8NCM8 4307 aaKnown RBP7.17□□□□□ -1.26
APTX-216ENST00000472896 CASC10Q5T4H9 136 aa7.16□□□□□ -1.26
APTX-216ENST00000472896 LINC00242Q5T6M2 205 aa7.16□□□□□ -1.26
APTX-216ENST00000472896 JMJD7-PLA2G4BH0Y9G9 81 aa7.15□□□□□ -1.26
APTX-216ENST00000472896 RS1O15537 224 aa7.15□□□□□ -1.26
APTX-216ENST00000472896 COX6A2Q02221 97 aa7.15□□□□□ -1.26
APTX-216ENST00000472896 SMIM26A0A096LP01 95 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 XCL1P47992 114 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 C10orf99Q6UWK7 81 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 LINC00482Q8N8I6 264 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 C1orf43Q9BWL3 253 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 XCL2Q9UBD3 114 aa7.15□□□□□ -1.27
APTX-216ENST00000472896 IGHV3OR16-12A0A075B7B8 117 aa7.14□□□□□ -1.27
APTX-216ENST00000472896 A0A087WYN8 130 aa7.14□□□□□ -1.27
APTX-216ENST00000472896 MUC7Q8TAX7 377 aa7.14□□□□□ -1.27
APTX-216ENST00000472896 ORMDL1Q9P0S3 153 aa7.14□□□□□ -1.27
APTX-216ENST00000472896 TRAV7A0A075B6U4 112 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 A0A0U1RRA0 63 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 LCE6AA0A183 80 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 KNCNA6PVL3 124 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 K7EQG2 157 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 IGHV3-53P01767 116 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 SMIM11BQ8TCY0 68 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 ZNF561-AS1K7EIQ3 104 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 SPINK13Q1W4C9 94 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 SND1-IT1Q9HBX3 110 aa7.13□□□□□ -1.27
APTX-216ENST00000472896 IGHV3-73A0A0B4J1V6 119 aa7.12□□□□□ -1.27
APTX-216ENST00000472896 IGHV3-11P01762 117 aa7.12□□□□□ -1.27
APTX-216ENST00000472896 ATP5EP56381 51 aaPredicted RBP7.12□□□□□ -1.27
APTX-216ENST00000472896 C9orf129Q5T035 196 aaKnown RBP7.12□□□□□ -1.27
APTX-216ENST00000472896 LINC00337Q8N6G1 96 aa7.12□□□□□ -1.27
APTX-216ENST00000472896 LINC00167Q96N53 147 aa7.12□□□□□ -1.27
APTX-216ENST00000472896 IGKV2-28A0A075B6P5 120 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 IGKV2D-28P01615 120 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 C18orf65Q6ZTR6 163 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 LINC00336Q6ZUF6 198 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 C20orf197Q8N268 126 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 STAB2Q8WWQ8 2551 aa7.11□□□□□ -1.27
APTX-216ENST00000472896 SACSQ9NZJ4 4579 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 H7BZZ5 65 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 NCR3O14931 201 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 LECT2O14960 151 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 NDUFC1O43677 76 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 IGKV3-20P01619 116 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 KLKP1Q107X0 134 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 UBL5Q9BZL1 73 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 TRAV23DV6A0A075B6W5 121 aa7.1□□□□□ -1.27
APTX-216ENST00000472896 IGLV1-40P01703 118 aa7.1□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 267 ms