RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 E9PLD3 99 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 F8WDY8 70 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 J3QQQ9 107 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 FUSP35637 526 aaKnown RBP eCLIP6.89□□□□□ -1.31
UBE2F-220ENST00000472479 C2orf82Q6UX34 121 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 UNQ6190/PRO20217Q6UXQ8 127 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 ZNF625Q96I27 306 aaPredicted RBP6.89□□□□□ -1.31
UBE2F-220ENST00000472479 VAMP8Q9BV40 100 aa6.89□□□□□ -1.31
UBE2F-220ENST00000472479 MYMXA0A1B0GTQ4 84 aa6.88□□□□□ -1.31
UBE2F-220ENST00000472479 S100A12P80511 92 aa6.88□□□□□ -1.31
UBE2F-220ENST00000472479 Q6ZRU5 148 aa6.88□□□□□ -1.31
UBE2F-220ENST00000472479 DPH3Q96FX2 82 aa6.88□□□□□ -1.31
UBE2F-220ENST00000472479 NDUFA12Q9UI09 145 aa6.88□□□□□ -1.31
UBE2F-220ENST00000472479 KIAA0087Q14695 138 aa6.87□□□□□ -1.31
UBE2F-220ENST00000472479 MAJINQ3KP22 176 aa6.87□□□□□ -1.31
UBE2F-220ENST00000472479 MEIG1Q5JSS6 88 aa6.87□□□□□ -1.31
UBE2F-220ENST00000472479 SFTA2Q6UW10 78 aa6.87□□□□□ -1.31
UBE2F-220ENST00000472479 PAM16Q9Y3D7 125 aa6.87□□□□□ -1.31
UBE2F-220ENST00000472479 FAM229AH3BQW9 127 aa6.86□□□□□ -1.31
UBE2F-220ENST00000472479 ANKRD39Q53RE8 183 aa6.86□□□□□ -1.31
UBE2F-220ENST00000472479 PYY3Q5JQD4 70 aa6.86□□□□□ -1.31
UBE2F-220ENST00000472479 PKIGQ9Y2B9 76 aa6.86□□□□□ -1.31
UBE2F-220ENST00000472479 ZNF815PA8K554 130 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 SLPIP03973 132 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 CNBPP62633 177 aaKnown RBP6.85□□□□□ -1.31
UBE2F-220ENST00000472479 HERV-K104P63124 156 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 CIRBPQ14011 172 aaKnown RBP6.85□□□□□ -1.31
UBE2F-220ENST00000472479 SPATA45Q537H7 98 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 C10orf25Q5T742 122 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 KMT2CQ8NEZ4 4911 aaKnown RBP6.85□□□□□ -1.31
UBE2F-220ENST00000472479 HYDINQ4G0P3 5121 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 DNAH2Q9P225 4427 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 TRBV30A0A0K0K1B3 111 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 A0A0U1RRA0 63 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 LOC105371267A0A1B0GV96 52 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 C16orf90A8MZG2 172 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 LINC00587B1AMM8 73 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 GCSHP23434 173 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 PFN2P35080 140 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 LINC00158P58513 81 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 RPL18AQ02543 176 aaKnown RBP6.85□□□□□ -1.31
UBE2F-220ENST00000472479 GAGE2BQ13066 116 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 LINC01620Q4KN68 170 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 CDPF1Q6NVV7 123 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 SCGB1D4Q6XE38 83 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 C6orf48Q9UBA6 75 aa6.85□□□□□ -1.31
UBE2F-220ENST00000472479 IGKV2D-26A0A0A0MRZ7 120 aa6.84□□□□□ -1.31
UBE2F-220ENST00000472479 LOC107984640A0A0U1RRK4 108 aa6.84□□□□□ -1.31
UBE2F-220ENST00000472479 TSPEAR-AS2P59090 65 aa6.84□□□□□ -1.31
UBE2F-220ENST00000472479 C9orf116Q5BN46 136 aaPredicted RBP6.84□□□□□ -1.31
UBE2F-220ENST00000472479 C9orf163Q8N9P6 203 aa6.84□□□□□ -1.31
UBE2F-220ENST00000472479 RYR2Q92736 4967 aa6.83□□□□□ -1.32
UBE2F-220ENST00000472479 RNF151Q2KHN1 245 aa6.83□□□□□ -1.32
UBE2F-220ENST00000472479 GAGE2EQ4V326 116 aa6.83□□□□□ -1.32
UBE2F-220ENST00000472479 GAGE2DQ9UEU5 116 aa6.83□□□□□ -1.32
UBE2F-220ENST00000472479 ERG28Q9UKR5 140 aa6.83□□□□□ -1.32
UBE2F-220ENST00000472479 DNAH10Q8IVF4 4471 aa6.82□□□□□ -1.32
UBE2F-220ENST00000472479 IGKV2-24A0A0C4DH68 120 aa6.82□□□□□ -1.32
UBE2F-220ENST00000472479 TTTY13Q9BZ97 58 aa6.82□□□□□ -1.32
UBE2F-220ENST00000472479 SMIM13P0DJ93 91 aa6.81□□□□□ -1.32
UBE2F-220ENST00000472479 PCP2Q8IVA1 136 aa6.81□□□□□ -1.32
UBE2F-220ENST00000472479 C14orf144Q96I85 54 aa6.81□□□□□ -1.32
UBE2F-220ENST00000472479 DNAH17Q9UFH2 4485 aa6.81□□□□□ -1.32
UBE2F-220ENST00000472479 SMIM6P0DI80 62 aa6.8□□□□□ -1.32
UBE2F-220ENST00000472479 COX17Q14061 63 aa6.8□□□□□ -1.32
UBE2F-220ENST00000472479 XP32Q5T750 250 aa6.8□□□□□ -1.32
UBE2F-220ENST00000472479 A0A0J9YXY3 114 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 A0A1B0GVY2 172 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 NDUFC2-KCTD14E9PQ53 114 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 COX8AP10176 69 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 SLC25A34Q6PIV7 304 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 MIEN1Q9BRT3 115 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 LINC00474Q9P2X8 69 aa6.79□□□□□ -1.32
UBE2F-220ENST00000472479 SRSF9Q13242 221 aaKnown RBP eCLIP6.78□□□□□ -1.32
UBE2F-220ENST00000472479 XAGE1AQ9HD64 81 aa6.78□□□□□ -1.32
UBE2F-220ENST00000472479 A0A096LNI7 61 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 TMEM238C9JI98 176 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 TLX1NBP0CAT3 122 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 CHTF8P0CG12 524 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 PTTG1IPP53801 180 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 NPC2P61916 151 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 Q6ZRP5 223 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 MIR7-3HGQ8N6C7 128 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 C12orf57Q99622 126 aa6.77□□□□□ -1.33
UBE2F-220ENST00000472479 FRAS1Q86XX4 4008 aa6.76□□□□□ -1.33
UBE2F-220ENST00000472479 KRTAP10-1P60331 282 aa6.76□□□□□ -1.33
UBE2F-220ENST00000472479 DAND5Q8N907 189 aa6.76□□□□□ -1.33
UBE2F-220ENST00000472479 TIMM17BO60830 172 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 BOD1L2Q8IYS8 172 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 COPS9Q8WXC6 57 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 PRO1933Q9H354 126 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 SND1-IT1Q9HBX3 110 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 RYR3Q15413 4870 aa6.75□□□□□ -1.33
UBE2F-220ENST00000472479 HIST1H4GQ99525 98 aa6.74□□□□□ -1.33
UBE2F-220ENST00000472479 UQCR10Q9UDW1 63 aa6.74□□□□□ -1.33
UBE2F-220ENST00000472479 DLEU1O43261 78 aa6.73□□□□□ -1.33
UBE2F-220ENST00000472479 RPL24P83731 157 aaKnown RBP6.73□□□□□ -1.33
UBE2F-220ENST00000472479 FAM19A5Q7Z5A7 132 aaPredicted RBP6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms