RNA–Protein interactions for RNA: ENST00000470763.1

NPHP4-207, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 3,156 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-207ENST00000470763 UBE2L6O14933 153 aa9.71□□□□□ -0.85
NPHP4-207ENST00000470763 GHRHP01286 108 aa9.71□□□□□ -0.85
NPHP4-207ENST00000470763 C11orf68Q9H3H3 251 aaKnown RBP9.71□□□□□ -0.85
NPHP4-207ENST00000470763 WIPF1O43516 503 aa9.71□□□□□ -0.86
NPHP4-207ENST00000470763 SS18Q15532 418 aa9.71□□□□□ -0.86
NPHP4-207ENST00000470763 NSD1Q96L73 2696 aaPredicted RBP9.71□□□□□ -0.86
NPHP4-207ENST00000470763 DEFB112Q30KQ8 113 aa9.71□□□□□ -0.86
NPHP4-207ENST00000470763 FAM19A1Q7Z5A9 133 aa9.71□□□□□ -0.86
NPHP4-207ENST00000470763 MXRA5Q9NR99 2828 aa9.71□□□□□ -0.86
NPHP4-207ENST00000470763 IGHV4-30-2A0A087WSY4 118 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 INSP01308 110 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 JMJD1CQ15652 2540 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 K7EQD1 137 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 Q6ZTI0 123 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 WFDC11Q8NEX6 87 aa9.7□□□□□ -0.86
NPHP4-207ENST00000470763 MSMBP08118 114 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 MAP6D1Q9H9H5 199 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 TLN2Q9Y4G6 2542 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 ORMDL1Q9P0S3 153 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 A8MTW9 85 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 ENHOQ6UWT2 76 aa9.69□□□□□ -0.86
NPHP4-207ENST00000470763 C20orf197Q8N268 126 aa9.68□□□□□ -0.86
NPHP4-207ENST00000470763 CCKP06307 115 aa9.68□□□□□ -0.86
NPHP4-207ENST00000470763 TMEM243Q9BU79 118 aa9.67□□□□□ -0.86
NPHP4-207ENST00000470763 LOC100131303A0A0U1RQF7 123 aa9.67□□□□□ -0.86
NPHP4-207ENST00000470763 RNASE1P07998 156 aaKnown RBP9.67□□□□□ -0.86
NPHP4-207ENST00000470763 KHDC1LQ5JSQ8 128 aa9.67□□□□□ -0.86
NPHP4-207ENST00000470763 CCL19Q99731 98 aa9.66□□□□□ -0.86
NPHP4-207ENST00000470763 IGLV4-60A0A075B6I1 120 aa9.64□□□□□ -0.87
NPHP4-207ENST00000470763 SMR3AQ99954 134 aa9.64□□□□□ -0.87
NPHP4-207ENST00000470763 ANK3Q12955 4377 aaKnown RBP9.64□□□□□ -0.87
NPHP4-207ENST00000470763 PRR3P79522 188 aaKnown RBP9.64□□□□□ -0.87
NPHP4-207ENST00000470763 C1orf158Q8N1D5 194 aa9.64□□□□□ -0.87
NPHP4-207ENST00000470763 DYNLRB2Q8TF09 96 aa9.64□□□□□ -0.87
NPHP4-207ENST00000470763 TRBV10-1A0A0K0K1A3 114 aa9.63□□□□□ -0.87
NPHP4-207ENST00000470763 TRBV6-4A0A1B0GX49 114 aa9.63□□□□□ -0.87
NPHP4-207ENST00000470763 IBA57-AS1B1ANH7 110 aa9.63□□□□□ -0.87
NPHP4-207ENST00000470763 NOP10Q9NPE3 64 aaKnown RBP9.62□□□□□ -0.87
NPHP4-207ENST00000470763 FN1P02751 2386 aaKnown RBP9.62□□□□□ -0.87
NPHP4-207ENST00000470763 IGHV3OR16-9A0A0B4J2B5 98 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 NDUFC2O95298 119 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 XCL1P47992 114 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 S100A7L2Q5SY68 101 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 FAM236DA0A1B0GTK5 79 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 FAM236CP0DP71 79 aa9.61□□□□□ -0.87
NPHP4-207ENST00000470763 MAPK1IP1LQ8NDC0 245 aa9.6□□□□□ -0.87
NPHP4-207ENST00000470763 C6orf226Q5I0X4 101 aa9.6□□□□□ -0.87
NPHP4-207ENST00000470763 STHQ8IWL8 128 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 IL17DQ8TAD2 202 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 ZNF702PQ9H963 129 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 B4DSR2 109 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 Q8N814 137 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 A0A096LNT2 108 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 JMJD7-PLA2G4BH0Y9G9 81 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 LY6G6DO95868 133 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 ODF3L2Q3SX64 289 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 UBL5Q9BZL1 73 aa9.59□□□□□ -0.87
NPHP4-207ENST00000470763 TRGV2A0A075B6R0 118 aa9.58□□□□□ -0.88
NPHP4-207ENST00000470763 ATP5EP2Q5VTU8 51 aa9.58□□□□□ -0.88
NPHP4-207ENST00000470763 SONP18583 2426 aaKnown RBP9.58□□□□□ -0.88
NPHP4-207ENST00000470763 A0A087WZ39 114 aa9.57□□□□□ -0.88
NPHP4-207ENST00000470763 NDUFC2-KCTD14E9PQ53 114 aa9.57□□□□□ -0.88
NPHP4-207ENST00000470763 NANOS2P60321 138 aaKnown RBP9.57□□□□□ -0.88
NPHP4-207ENST00000470763 DEFB114Q30KQ6 69 aa9.57□□□□□ -0.88
NPHP4-207ENST00000470763 TMEM256-PLSCR3K7ERE1 68 aa9.56□□□□□ -0.88
NPHP4-207ENST00000470763 SNURFQ9Y675 71 aa9.56□□□□□ -0.88
NPHP4-207ENST00000470763 HIVEP2P31629 2446 aa9.56□□□□□ -0.88
NPHP4-207ENST00000470763 H7BZZ5 65 aa9.56□□□□□ -0.88
NPHP4-207ENST00000470763 DNHD1Q96M86 4753 aa9.56□□□□□ -0.88
NPHP4-207ENST00000470763 CLPSL2Q6UWE3 100 aa9.55□□□□□ -0.88
NPHP4-207ENST00000470763 LINC00336Q6ZUF6 198 aa9.55□□□□□ -0.88
NPHP4-207ENST00000470763 TMEM86BQ8N661 226 aa9.55□□□□□ -0.88
NPHP4-207ENST00000470763 M0R2N4 97 aa9.55□□□□□ -0.88
NPHP4-207ENST00000470763 LYPD5Q6UWN5 251 aa9.55□□□□□ -0.88
NPHP4-207ENST00000470763 LINC00167Q96N53 147 aa9.54□□□□□ -0.88
NPHP4-207ENST00000470763 CR1P17927 2039 aa9.54□□□□□ -0.88
NPHP4-207ENST00000470763 TRGV4A0A0C4DH28 118 aa9.54□□□□□ -0.88
NPHP4-207ENST00000470763 HAMPP81172 84 aa9.53□□□□□ -0.88
NPHP4-207ENST00000470763 KRTAP1-1Q07627 177 aa9.53□□□□□ -0.88
NPHP4-207ENST00000470763 FBN1P35555 2871 aaKnown RBP9.53□□□□□ -0.88
NPHP4-207ENST00000470763 TRBV6-8A0A0A6YYG3 113 aa9.53□□□□□ -0.88
NPHP4-207ENST00000470763 LINC00959A0A1B0GUT2 108 aa9.53□□□□□ -0.88
NPHP4-207ENST00000470763 RMI2Q96E14 147 aa9.53□□□□□ -0.88
NPHP4-207ENST00000470763 TRAV10A0A0B4J240 114 aa9.52□□□□□ -0.89
NPHP4-207ENST00000470763 C6orf99Q4VX62 202 aa9.52□□□□□ -0.89
NPHP4-207ENST00000470763 ATRQ13535 2644 aa9.52□□□□□ -0.89
NPHP4-207ENST00000470763 SERP1Q9Y6X1 66 aa9.51□□□□□ -0.89
NPHP4-207ENST00000470763 C11orf44Q8N8P7 122 aa9.51□□□□□ -0.89
NPHP4-207ENST00000470763 MRAPQ8TCY5 172 aa9.51□□□□□ -0.89
NPHP4-207ENST00000470763 C1orf43Q9BWL3 253 aa9.51□□□□□ -0.89
NPHP4-207ENST00000470763 TRBV10-3A0A0K0K1G6 114 aa9.5□□□□□ -0.89
NPHP4-207ENST00000470763 TRAV7A0A075B6U4 112 aa9.5□□□□□ -0.89
NPHP4-207ENST00000470763 LINC01547P58512 204 aaPredicted RBP9.5□□□□□ -0.89
NPHP4-207ENST00000470763 LAMTOR3Q9UHA4 124 aa9.5□□□□□ -0.89
NPHP4-207ENST00000470763 KRTAP21-3Q3LHN1 58 aa9.49□□□□□ -0.89
NPHP4-207ENST00000470763 C9orf116Q5BN46 136 aaPredicted RBP9.49□□□□□ -0.89
NPHP4-207ENST00000470763 WFDC10AQ9H1F0 79 aa9.49□□□□□ -0.89
NPHP4-207ENST00000470763 PLAC8L1A1L4L8 177 aa9.49□□□□□ -0.89
NPHP4-207ENST00000470763 RBM3P98179 157 aaKnown RBP9.49□□□□□ -0.89
NPHP4-207ENST00000470763 Q6ZQT0 140 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms