RNA–Protein interactions for RNA: ENST00000470759.5

SHANK2-215, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 762 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-215ENST00000470759 CKS1BP61024 79 aa11.9□□□□□ -0.5
SHANK2-215ENST00000470759 C2orf82Q6UX34 121 aa11.9□□□□□ -0.5
SHANK2-215ENST00000470759 SRRM2Q9UQ35 2752 aaKnown RBP11.9□□□□□ -0.51
SHANK2-215ENST00000470759 HSBP1O75506 76 aa11.89□□□□□ -0.51
SHANK2-215ENST00000470759 C7orf33Q8WU49 177 aa11.89□□□□□ -0.51
SHANK2-215ENST00000470759 H3BRM9 83 aa11.88□□□□□ -0.51
SHANK2-215ENST00000470759 SMIM1B2RUZ4 78 aa11.87□□□□□ -0.51
SHANK2-215ENST00000470759 TLX1NBP0CAT3 122 aa11.87□□□□□ -0.51
SHANK2-215ENST00000470759 IGLC3P0DOY3 106 aa11.87□□□□□ -0.51
SHANK2-215ENST00000470759 SCO1O75880 301 aa11.86□□□□□ -0.51
SHANK2-215ENST00000470759 KRTAP10-4P60372 401 aaPredicted RBP11.86□□□□□ -0.51
SHANK2-215ENST00000470759 SPINK8P0C7L1 97 aa11.85□□□□□ -0.51
SHANK2-215ENST00000470759 CXCL5P42830 114 aa11.85□□□□□ -0.51
SHANK2-215ENST00000470759 Q6ZRP5 223 aa11.84□□□□□ -0.51
SHANK2-215ENST00000470759 COX7B2Q8TF08 81 aa11.84□□□□□ -0.51
SHANK2-215ENST00000470759 F8VRH5 84 aa11.83□□□□□ -0.52
SHANK2-215ENST00000470759 GAGE2EQ4V326 116 aa11.83□□□□□ -0.52
SHANK2-215ENST00000470759 FAM19A2Q8N3H0 131 aa11.83□□□□□ -0.52
SHANK2-215ENST00000470759 IFI27L1Q96BM0 104 aa11.83□□□□□ -0.52
SHANK2-215ENST00000470759 GAGE2DQ9UEU5 116 aa11.83□□□□□ -0.52
SHANK2-215ENST00000470759 FLG2Q5D862 2391 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-215ENST00000470759 NDUFC2-KCTD14E9PQ53 114 aa11.82□□□□□ -0.52
SHANK2-215ENST00000470759 SERF1AO75920 110 aa11.82□□□□□ -0.52
SHANK2-215ENST00000470759 C9orf116Q5BN46 136 aaPredicted RBP11.82□□□□□ -0.52
SHANK2-215ENST00000470759 A0A1W2PNN7 141 aa11.81□□□□□ -0.52
SHANK2-215ENST00000470759 ZNF22P17026 224 aaPredicted RBP11.81□□□□□ -0.52
SHANK2-215ENST00000470759 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
SHANK2-215ENST00000470759 TRAV12-1A0A0B4J245 112 aa11.8□□□□□ -0.52
SHANK2-215ENST00000470759 C11orf86A6NJI1 115 aa11.79□□□□□ -0.52
SHANK2-215ENST00000470759 LINC00310P59036 64 aa11.79□□□□□ -0.52
SHANK2-215ENST00000470759 TMEM170BQ5T4T1 132 aa11.79□□□□□ -0.52
SHANK2-215ENST00000470759 LEPROTL1O95214 131 aa11.78□□□□□ -0.52
SHANK2-215ENST00000470759 IGLV5-39A0A0G2JS06 123 aa11.77□□□□□ -0.53
SHANK2-215ENST00000470759 FAM168BA1KXE4 195 aa11.75□□□□□ -0.53
SHANK2-215ENST00000470759 PRR3P79522 188 aaKnown RBP11.75□□□□□ -0.53
SHANK2-215ENST00000470759 FAM19A5Q7Z5A7 132 aaPredicted RBP11.75□□□□□ -0.53
SHANK2-215ENST00000470759 H0Y8G0 127 aa11.74□□□□□ -0.53
SHANK2-215ENST00000470759 NUPR1O60356 82 aa11.74□□□□□ -0.53
SHANK2-215ENST00000470759 HNRNPA3P51991 378 aaKnown RBP11.74□□□□□ -0.53
SHANK2-215ENST00000470759 HSPB8Q9UJY1 196 aa11.74□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BKO60814 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BJP06899 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BOP23527 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BBP33778 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BDP58876 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BCP62807 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST2H2BEQ16778 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.73□□□□□ -0.53
SHANK2-215ENST00000470759 C9orf129Q5T035 196 aaKnown RBP11.73□□□□□ -0.53
SHANK2-215ENST00000470759 PHF5AQ7RTV0 110 aaKnown RBP11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BHQ93079 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BNQ99877 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 HIST1H2BMQ99879 126 aa11.73□□□□□ -0.53
SHANK2-215ENST00000470759 FABP4P15090 132 aa11.72□□□□□ -0.53
SHANK2-215ENST00000470759 XAGE1AQ9HD64 81 aa11.71□□□□□ -0.53
SHANK2-215ENST00000470759 ODF1Q14990 250 aa11.7□□□□□ -0.54
SHANK2-215ENST00000470759 MYCBP2O75592 4640 aa11.7□□□□□ -0.54
SHANK2-215ENST00000470759 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
SHANK2-215ENST00000470759 J3QL48 77 aa11.69□□□□□ -0.54
SHANK2-215ENST00000470759 M0QXV9 152 aa11.69□□□□□ -0.54
SHANK2-215ENST00000470759 SFTA2Q6UW10 78 aa11.69□□□□□ -0.54
SHANK2-215ENST00000470759 KRTAP29-1A8MX34 341 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-215ENST00000470759 S100A1P23297 94 aa11.68□□□□□ -0.54
SHANK2-215ENST00000470759 DMBT1Q9UGM3 2413 aaPredicted RBP11.68□□□□□ -0.54
SHANK2-215ENST00000470759 KRTAP7-1Q8IUC3 87 aa11.67□□□□□ -0.54
SHANK2-215ENST00000470759 OXTP01178 125 aa11.66□□□□□ -0.54
SHANK2-215ENST00000470759 PFN2P35080 140 aa11.66□□□□□ -0.54
SHANK2-215ENST00000470759 UBE2BP63146 152 aa11.66□□□□□ -0.54
SHANK2-215ENST00000470759 MAP1LC3CQ9BXW4 147 aa11.66□□□□□ -0.54
SHANK2-215ENST00000470759 PSORS1C2Q9UIG4 136 aa11.66□□□□□ -0.54
SHANK2-215ENST00000470759 PLNP26678 52 aa11.65□□□□□ -0.54
SHANK2-215ENST00000470759 SERTAD4-AS1Q5TG53 156 aa11.65□□□□□ -0.54
SHANK2-215ENST00000470759 ZNF625Q96I27 306 aaPredicted RBP11.65□□□□□ -0.54
SHANK2-215ENST00000470759 ERG28Q9UKR5 140 aa11.65□□□□□ -0.54
SHANK2-215ENST00000470759 PKHD1L1Q86WI1 4243 aa11.65□□□□□ -0.54
SHANK2-215ENST00000470759 DPM2O94777 84 aa11.63□□□□□ -0.55
SHANK2-215ENST00000470759 COX17Q14061 63 aa11.63□□□□□ -0.55
SHANK2-215ENST00000470759 C1orf137Q5JT78 98 aa11.63□□□□□ -0.55
SHANK2-215ENST00000470759 ATP6V1G1O75348 118 aa11.62□□□□□ -0.55
SHANK2-215ENST00000470759 LBHQ53QV2 105 aaPredicted RBP11.62□□□□□ -0.55
SHANK2-215ENST00000470759 C22orf24Q9Y442 160 aa11.62□□□□□ -0.55
SHANK2-215ENST00000470759 SPINK6Q6UWN8 80 aa11.61□□□□□ -0.55
SHANK2-215ENST00000470759 PMCHL2Q9BQD1 86 aa11.61□□□□□ -0.55
SHANK2-215ENST00000470759 IGKCP01834 107 aa11.6□□□□□ -0.55
SHANK2-215ENST00000470759 TP73-AS1Q9UF72 201 aa11.6□□□□□ -0.55
SHANK2-215ENST00000470759 PLA2G2DQ9UNK4 145 aa11.6□□□□□ -0.55
SHANK2-215ENST00000470759 HERVK_113P61574 105 aa11.59□□□□□ -0.55
SHANK2-215ENST00000470759 COA6Q5JTJ3 125 aaKnown RBP11.59□□□□□ -0.55
SHANK2-215ENST00000470759 KRTAP11-1Q8IUC1 163 aa11.59□□□□□ -0.55
SHANK2-215ENST00000470759 MRPL55Q7Z7F7 128 aaKnown RBP11.58□□□□□ -0.56
SHANK2-215ENST00000470759 SND1-IT1Q9HBX3 110 aa11.58□□□□□ -0.56
SHANK2-215ENST00000470759 SYS1-DBNDD2H3BUS1 97 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 LINC00158P58513 81 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 HERV-K104P63124 156 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 SRSF9Q13242 221 aaKnown RBP eCLIP11.57□□□□□ -0.56
SHANK2-215ENST00000470759 NKAPP1Q8N9T2 125 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 PLEKHB2Q96CS7 222 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 NDUFA12Q9UI09 145 aa11.57□□□□□ -0.56
SHANK2-215ENST00000470759 MYMXA0A1B0GTQ4 84 aa11.56□□□□□ -0.56
SHANK2-215ENST00000470759 LEPROTO15243 131 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms