RNA–Protein interactions for RNA: ENST00000470241.2

SMC1A-206, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-206ENST00000470241 LINC01545Q5VT33 79 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 C2orf82Q6UX34 121 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 UNQ6190/PRO20217Q6UXQ8 127 aa6.8□□□□□ -1.32
SMC1A-206ENST00000470241 NDUFA1O15239 70 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 IGKCP01834 107 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 PRSS2P07478 247 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 SDIM1Q6ZPB5 146 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 COX7B2Q8TF08 81 aa6.79□□□□□ -1.32
SMC1A-206ENST00000470241 FAM30AQ9NZY2 134 aa6.78□□□□□ -1.32
SMC1A-206ENST00000470241 C6orf48Q9UBA6 75 aa6.78□□□□□ -1.32
SMC1A-206ENST00000470241 CKS1BP61024 79 aa6.77□□□□□ -1.33
SMC1A-206ENST00000470241 RNF151Q2KHN1 245 aa6.77□□□□□ -1.33
SMC1A-206ENST00000470241 TMA7Q9Y2S6 64 aaKnown RBP6.77□□□□□ -1.33
SMC1A-206ENST00000470241 TRBV30A0A0K0K1B3 111 aa6.76□□□□□ -1.33
SMC1A-206ENST00000470241 PANO1I0J062 215 aa6.76□□□□□ -1.33
SMC1A-206ENST00000470241 CXCL5P42830 114 aa6.76□□□□□ -1.33
SMC1A-206ENST00000470241 Q6ZSA8 131 aa6.76□□□□□ -1.33
SMC1A-206ENST00000470241 RYR1P21817 5038 aa6.75□□□□□ -1.33
SMC1A-206ENST00000470241 C20orf202A1L168 122 aa6.75□□□□□ -1.33
SMC1A-206ENST00000470241 C9orf116Q5BN46 136 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-206ENST00000470241 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.75□□□□□ -1.33
SMC1A-206ENST00000470241 KIAA1109Q2LD37 5005 aa6.75□□□□□ -1.33
SMC1A-206ENST00000470241 A0A096LNI7 61 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 LOC107984640A0A0U1RRK4 108 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 TLX1NBP0CAT3 122 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 CHTF8P0CG12 524 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 XGP55808 180 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 TSPEAR-AS2P59090 65 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 HERVK_113P61574 105 aa6.74□□□□□ -1.33
SMC1A-206ENST00000470241 HSPG2P98160 4391 aa6.73□□□□□ -1.33
SMC1A-206ENST00000470241 LEPROTO15243 131 aa6.73□□□□□ -1.33
SMC1A-206ENST00000470241 HAMPP81172 84 aa6.73□□□□□ -1.33
SMC1A-206ENST00000470241 CIRBPQ14011 172 aaKnown RBP6.73□□□□□ -1.33
SMC1A-206ENST00000470241 ATOH7Q8N100 152 aa6.73□□□□□ -1.33
SMC1A-206ENST00000470241 STPG4Q8N801 248 aa6.73□□□□□ -1.33
SMC1A-206ENST00000470241 ZNF625Q96I27 306 aaPredicted RBP6.73□□□□□ -1.33
SMC1A-206ENST00000470241 IGKV2-24A0A0C4DH68 120 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 E9PLD3 99 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 CDK2AP2O75956 126 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 PTTG1IPP53801 180 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 RPL18AQ02543 176 aaKnown RBP6.72□□□□□ -1.33
SMC1A-206ENST00000470241 GAGE2BQ13066 116 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 Q6ZRP5 223 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 SPACA4Q8TDM5 124 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 PLEKHB2Q96CS7 222 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 PKIGQ9Y2B9 76 aa6.72□□□□□ -1.33
SMC1A-206ENST00000470241 NDUFC2-KCTD14E9PQ53 114 aa6.71□□□□□ -1.34
SMC1A-206ENST00000470241 J3QQQ9 107 aa6.71□□□□□ -1.34
SMC1A-206ENST00000470241 AKR1D1P51857 326 aa6.71□□□□□ -1.34
SMC1A-206ENST00000470241 SFTA2Q6UW10 78 aa6.71□□□□□ -1.34
SMC1A-206ENST00000470241 SCXQ7RTU7 201 aa6.71□□□□□ -1.34
SMC1A-206ENST00000470241 IGKV2D-26A0A0A0MRZ7 120 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 MAJINQ3KP22 176 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 GAGE2EQ4V326 116 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 ANKRD39Q53RE8 183 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 CIRBP-AS1Q8TBR5 109 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 GAGE2DQ9UEU5 116 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 NDUFA12Q9UI09 145 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 FAT1Q14517 4588 aa6.7□□□□□ -1.34
SMC1A-206ENST00000470241 SCGB1D1O95968 90 aa6.69□□□□□ -1.34
SMC1A-206ENST00000470241 LGALS3P17931 250 aaKnown RBP6.69□□□□□ -1.34
SMC1A-206ENST00000470241 LINC00474Q9P2X8 69 aa6.69□□□□□ -1.34
SMC1A-206ENST00000470241 ERG28Q9UKR5 140 aa6.69□□□□□ -1.34
SMC1A-206ENST00000470241 HERC2O95714 4834 aa6.69□□□□□ -1.34
SMC1A-206ENST00000470241 A0A087WYN8 130 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 MYMXA0A1B0GTQ4 84 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 A0A1W2PNN7 141 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 PFN2P35080 140 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 NMUP48645 174 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 C9orf129Q5T035 196 aaKnown RBP6.68□□□□□ -1.34
SMC1A-206ENST00000470241 DPH3Q96FX2 82 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 PLAC8Q9NZF1 115 aa6.68□□□□□ -1.34
SMC1A-206ENST00000470241 HERV-K104P63124 156 aa6.67□□□□□ -1.34
SMC1A-206ENST00000470241 EPM2AB3EWF7 344 aa6.66□□□□□ -1.34
SMC1A-206ENST00000470241 COX17Q14061 63 aa6.66□□□□□ -1.34
SMC1A-206ENST00000470241 JOSD1Q15040 202 aaPredicted RBP6.66□□□□□ -1.34
SMC1A-206ENST00000470241 KRTAP17-1Q9BYP8 105 aa6.66□□□□□ -1.34
SMC1A-206ENST00000470241 TTTY13Q9BZ97 58 aa6.66□□□□□ -1.34
SMC1A-206ENST00000470241 XAGE1AQ9HD64 81 aa6.66□□□□□ -1.34
SMC1A-206ENST00000470241 A0A0U1RRA0 63 aa6.65□□□□□ -1.34
SMC1A-206ENST00000470241 FAM168BA1KXE4 195 aa6.65□□□□□ -1.34
SMC1A-206ENST00000470241 SMIM13P0DJ93 91 aa6.65□□□□□ -1.34
SMC1A-206ENST00000470241 MEIG1Q5JSS6 88 aa6.65□□□□□ -1.34
SMC1A-206ENST00000470241 KRTAP7-1Q8IUC3 87 aa6.65□□□□□ -1.34
SMC1A-206ENST00000470241 A0A0J9YXY3 114 aa6.64□□□□□ -1.35
SMC1A-206ENST00000470241 ZNF815PA8K554 130 aa6.64□□□□□ -1.35
SMC1A-206ENST00000470241 SMR3BP02814 79 aaPredicted RBP6.64□□□□□ -1.35
SMC1A-206ENST00000470241 LINC00158P58513 81 aa6.64□□□□□ -1.35
SMC1A-206ENST00000470241 SND1-IT1Q9HBX3 110 aa6.64□□□□□ -1.35
SMC1A-206ENST00000470241 LINC00587B1AMM8 73 aa6.63□□□□□ -1.35
SMC1A-206ENST00000470241 HSBP1L1C9JCN9 74 aa6.63□□□□□ -1.35
SMC1A-206ENST00000470241 PYY3Q5JQD4 70 aa6.63□□□□□ -1.35
SMC1A-206ENST00000470241 SERTAD4-AS1Q5TG53 156 aa6.63□□□□□ -1.35
SMC1A-206ENST00000470241 PCP2Q8IVA1 136 aa6.63□□□□□ -1.35
SMC1A-206ENST00000470241 FAM19A5Q7Z5A7 132 aaPredicted RBP6.62□□□□□ -1.35
SMC1A-206ENST00000470241 MIR7-3HGQ8N6C7 128 aa6.62□□□□□ -1.35
SMC1A-206ENST00000470241 ADAMTSL4-AS1Q5T5F5 129 aa6.61□□□□□ -1.35
SMC1A-206ENST00000470241 PHF5AQ7RTV0 110 aaKnown RBP6.61□□□□□ -1.35
SMC1A-206ENST00000470241 LINC00528Q8N1L1 170 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms