RNA–Protein interactions for RNA: ENST00000469930.1

BRAF-202, Transcript of B-Raf proto-oncogene, serine/threonine kinase, humanhuman

TSL 2

Gene BRAF, Length 1,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAF-202ENST00000469930 SYCNQ0VAF6 134 aa13.52□□□□□ -0.25
BRAF-202ENST00000469930 CDPF1Q6NVV7 123 aa13.52□□□□□ -0.25
BRAF-202ENST00000469930 CAMK2N2Q96S95 79 aa13.52□□□□□ -0.25
BRAF-202ENST00000469930 TRBV30A0A0K0K1B3 111 aa13.51□□□□□ -0.25
BRAF-202ENST00000469930 ANKRD39Q53RE8 183 aa13.51□□□□□ -0.25
BRAF-202ENST00000469930 LINC00526Q96FQ7 95 aa13.51□□□□□ -0.25
BRAF-202ENST00000469930 ZNF625Q96I27 306 aaPredicted RBP13.51□□□□□ -0.25
BRAF-202ENST00000469930 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
BRAF-202ENST00000469930 TSPEAR-AS2P59090 65 aa13.49□□□□□ -0.25
BRAF-202ENST00000469930 Q6ZRU5 148 aa13.49□□□□□ -0.25
BRAF-202ENST00000469930 CARD19Q96LW7 228 aa13.49□□□□□ -0.25
BRAF-202ENST00000469930 PKD1P98161 4303 aa13.49□□□□□ -0.25
BRAF-202ENST00000469930 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.48□□□□□ -0.25
BRAF-202ENST00000469930 IGKV2D-26A0A0A0MRZ7 120 aa13.48□□□□□ -0.25
BRAF-202ENST00000469930 LGALS3P17931 250 aaKnown RBP13.48□□□□□ -0.25
BRAF-202ENST00000469930 HERV-K104P63124 156 aa13.48□□□□□ -0.25
BRAF-202ENST00000469930 MAJINQ3KP22 176 aa13.48□□□□□ -0.25
BRAF-202ENST00000469930 C2orf82Q6UX34 121 aa13.48□□□□□ -0.25
BRAF-202ENST00000469930 UNQ6190/PRO20217Q6UXQ8 127 aa13.48□□□□□ -0.25
BRAF-202ENST00000469930 MYMXA0A1B0GTQ4 84 aa13.47□□□□□ -0.25
BRAF-202ENST00000469930 C10orf25Q5T742 122 aa13.47□□□□□ -0.25
BRAF-202ENST00000469930 NDUFA12Q9UI09 145 aa13.47□□□□□ -0.25
BRAF-202ENST00000469930 KRTAP10-2P60368 255 aa13.46□□□□□ -0.25
BRAF-202ENST00000469930 VAMP8Q9BV40 100 aa13.46□□□□□ -0.25
BRAF-202ENST00000469930 C6orf48Q9UBA6 75 aa13.46□□□□□ -0.25
BRAF-202ENST00000469930 IGLV5-52A0A0A0MRZ9 124 aa13.45□□□□□ -0.26
BRAF-202ENST00000469930 TLX1NBP0CAT3 122 aa13.45□□□□□ -0.26
BRAF-202ENST00000469930 SMIM6P0DI80 62 aa13.45□□□□□ -0.26
BRAF-202ENST00000469930 PKIGQ9Y2B9 76 aa13.45□□□□□ -0.26
BRAF-202ENST00000469930 HECTD4Q9Y4D8 3996 aa13.44□□□□□ -0.26
BRAF-202ENST00000469930 EPPK1P58107 5090 aaKnown RBP13.43□□□□□ -0.26
BRAF-202ENST00000469930 LINC00587B1AMM8 73 aa13.43□□□□□ -0.26
BRAF-202ENST00000469930 COX17Q14061 63 aa13.43□□□□□ -0.26
BRAF-202ENST00000469930 SPATA45Q537H7 98 aa13.4□□□□□ -0.26
BRAF-202ENST00000469930 SDIM1Q6ZPB5 146 aa13.4□□□□□ -0.26
BRAF-202ENST00000469930 PAM16Q9Y3D7 125 aa13.4□□□□□ -0.26
BRAF-202ENST00000469930 BIRC6Q9NR09 4857 aa13.4□□□□□ -0.26
BRAF-202ENST00000469930 ZNF815PA8K554 130 aa13.39□□□□□ -0.27
BRAF-202ENST00000469930 DLEU1O43261 78 aa13.39□□□□□ -0.27
BRAF-202ENST00000469930 S100A12P80511 92 aa13.39□□□□□ -0.27
BRAF-202ENST00000469930 DNAH5Q8TE73 4624 aa13.39□□□□□ -0.27
BRAF-202ENST00000469930 LOC107984640A0A0U1RRK4 108 aa13.38□□□□□ -0.27
BRAF-202ENST00000469930 NDUFC2-KCTD14E9PQ53 114 aa13.38□□□□□ -0.27
BRAF-202ENST00000469930 COX8AP10176 69 aa13.38□□□□□ -0.27
BRAF-202ENST00000469930 PCP2Q8IVA1 136 aa13.38□□□□□ -0.27
BRAF-202ENST00000469930 ERG28Q9UKR5 140 aa13.38□□□□□ -0.27
BRAF-202ENST00000469930 A0A0J9YXY3 114 aa13.37□□□□□ -0.27
BRAF-202ENST00000469930 GCSHP23434 173 aa13.37□□□□□ -0.27
BRAF-202ENST00000469930 TIMM17BO60830 172 aa13.36□□□□□ -0.27
BRAF-202ENST00000469930 C9orf116Q5BN46 136 aaPredicted RBP13.36□□□□□ -0.27
BRAF-202ENST00000469930 BOD1L2Q8IYS8 172 aa13.36□□□□□ -0.27
BRAF-202ENST00000469930 TTTY13Q9BZ97 58 aa13.36□□□□□ -0.27
BRAF-202ENST00000469930 FUSP35637 526 aaKnown RBP eCLIP13.34□□□□□ -0.27
BRAF-202ENST00000469930 CIRBPQ14011 172 aaKnown RBP13.34□□□□□ -0.27
BRAF-202ENST00000469930 C16orf90A8MZG2 172 aa13.33□□□□□ -0.28
BRAF-202ENST00000469930 MEIG1Q5JSS6 88 aa13.32□□□□□ -0.28
BRAF-202ENST00000469930 Q6ZRP5 223 aa13.32□□□□□ -0.28
BRAF-202ENST00000469930 LINC00474Q9P2X8 69 aa13.32□□□□□ -0.28
BRAF-202ENST00000469930 PTTG1IPP53801 180 aa13.31□□□□□ -0.28
BRAF-202ENST00000469930 SMIM13P0DJ93 91 aa13.3□□□□□ -0.28
BRAF-202ENST00000469930 PFN2P35080 140 aa13.3□□□□□ -0.28
BRAF-202ENST00000469930 LINC01620Q4KN68 170 aa13.3□□□□□ -0.28
BRAF-202ENST00000469930 LITAFQ99732 161 aa13.3□□□□□ -0.28
BRAF-202ENST00000469930 DYNC1H1Q14204 4646 aaKnown RBP13.29□□□□□ -0.28
BRAF-202ENST00000469930 LOC107984156A0A0G2JMH3 177 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 LINC00158P58513 81 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 SLC25A34Q6PIV7 304 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 SCGB1D4Q6XE38 83 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 ARL17AQ8IVW1 177 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 C14orf144Q96I85 54 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 KRTAP17-1Q9BYP8 105 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 DNAH8Q96JB1 4490 aa13.29□□□□□ -0.28
BRAF-202ENST00000469930 KRTAP10-1P60331 282 aa13.28□□□□□ -0.28
BRAF-202ENST00000469930 Q6ZSA8 131 aa13.28□□□□□ -0.28
BRAF-202ENST00000469930 Q6ZVH6 145 aa13.28□□□□□ -0.28
BRAF-202ENST00000469930 A0A096LNI7 61 aa13.27□□□□□ -0.29
BRAF-202ENST00000469930 RPL18AQ02543 176 aaKnown RBP13.27□□□□□ -0.29
BRAF-202ENST00000469930 LINC00518Q8N0U6 118 aa13.27□□□□□ -0.29
BRAF-202ENST00000469930 C12orf57Q99622 126 aa13.27□□□□□ -0.29
BRAF-202ENST00000469930 PPDPFQ9H3Y8 114 aa13.27□□□□□ -0.29
BRAF-202ENST00000469930 TMEM238C9JI98 176 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 GAGE2BQ13066 116 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 MIR7-3HGQ8N6C7 128 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 SPANXDQ9BXN6 97 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 SPANXCQ9NY87 97 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 HIGD1BQ9P298 99 aa13.26□□□□□ -0.29
BRAF-202ENST00000469930 PKHD1P08F94 4074 aa13.25□□□□□ -0.29
BRAF-202ENST00000469930 ADAMTSL4-AS1Q5T5F5 129 aa13.25□□□□□ -0.29
BRAF-202ENST00000469930 SPACA4Q8TDM5 124 aa13.25□□□□□ -0.29
BRAF-202ENST00000469930 SND1-IT1Q9HBX3 110 aa13.25□□□□□ -0.29
BRAF-202ENST00000469930 SPANXB1Q9NS25 103 aaPredicted RBP13.25□□□□□ -0.29
BRAF-202ENST00000469930 EPM2AB3EWF7 344 aa13.24□□□□□ -0.29
BRAF-202ENST00000469930 GAGE2EQ4V326 116 aa13.24□□□□□ -0.29
BRAF-202ENST00000469930 GAGE2DQ9UEU5 116 aa13.24□□□□□ -0.29
BRAF-202ENST00000469930 PLA2G2DQ9UNK4 145 aa13.24□□□□□ -0.29
BRAF-202ENST00000469930 C9orf129Q5T035 196 aaKnown RBP13.23□□□□□ -0.29
BRAF-202ENST00000469930 UQCR10Q9UDW1 63 aa13.23□□□□□ -0.29
BRAF-202ENST00000469930 LRP1BQ9NZR2 4599 aa13.23□□□□□ -0.29
BRAF-202ENST00000469930 A0A0U1RRA0 63 aa13.22□□□□□ -0.29
BRAF-202ENST00000469930 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms