RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 DPM2O94777 84 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 SYCNQ0VAF6 134 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 PET117Q6UWS5 81 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 Q8IZM0 81 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 CARD19Q96LW7 228 aa9.53□□□□□ -0.88
COL9A3-209ENST00000469852 ABCA13Q86UQ4 5058 aa9.52□□□□□ -0.88
COL9A3-209ENST00000469852 IGKCP01834 107 aa9.52□□□□□ -0.89
COL9A3-209ENST00000469852 PLNP26678 52 aa9.52□□□□□ -0.89
COL9A3-209ENST00000469852 COX7B2Q8TF08 81 aa9.52□□□□□ -0.89
COL9A3-209ENST00000469852 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.51□□□□□ -0.89
COL9A3-209ENST00000469852 PRSS2P07478 247 aa9.51□□□□□ -0.89
COL9A3-209ENST00000469852 NDUFA1O15239 70 aa9.5□□□□□ -0.89
COL9A3-209ENST00000469852 C6orf226Q5I0X4 101 aa9.5□□□□□ -0.89
COL9A3-209ENST00000469852 SDIM1Q6ZPB5 146 aa9.5□□□□□ -0.89
COL9A3-209ENST00000469852 FAM30AQ9NZY2 134 aa9.5□□□□□ -0.89
COL9A3-209ENST00000469852 C6orf48Q9UBA6 75 aa9.5□□□□□ -0.89
COL9A3-209ENST00000469852 PANO1I0J062 215 aa9.49□□□□□ -0.89
COL9A3-209ENST00000469852 C9orf116Q5BN46 136 aaPredicted RBP9.48□□□□□ -0.89
COL9A3-209ENST00000469852 KRTAP4-5Q9BYR2 181 aa9.48□□□□□ -0.89
COL9A3-209ENST00000469852 F8WDY8 70 aa9.47□□□□□ -0.89
COL9A3-209ENST00000469852 TSPEAR-AS2P59090 65 aa9.47□□□□□ -0.89
COL9A3-209ENST00000469852 CKS1BP61024 79 aa9.47□□□□□ -0.89
COL9A3-209ENST00000469852 HAMPP81172 84 aa9.47□□□□□ -0.89
COL9A3-209ENST00000469852 ATOH7Q8N100 152 aa9.47□□□□□ -0.89
COL9A3-209ENST00000469852 CHTF8P0CG12 524 aa9.46□□□□□ -0.9
COL9A3-209ENST00000469852 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.46□□□□□ -0.9
COL9A3-209ENST00000469852 A0A096LNI7 61 aa9.45□□□□□ -0.9
COL9A3-209ENST00000469852 RNF151Q2KHN1 245 aa9.45□□□□□ -0.9
COL9A3-209ENST00000469852 Q6ZSA8 131 aa9.45□□□□□ -0.9
COL9A3-209ENST00000469852 STPG4Q8N801 248 aa9.45□□□□□ -0.9
COL9A3-209ENST00000469852 HSPG2P98160 4391 aa9.45□□□□□ -0.9
COL9A3-209ENST00000469852 TRBV30A0A0K0K1B3 111 aa9.44□□□□□ -0.9
COL9A3-209ENST00000469852 C20orf202A1L168 122 aa9.44□□□□□ -0.9
COL9A3-209ENST00000469852 CXCL5P42830 114 aa9.44□□□□□ -0.9
COL9A3-209ENST00000469852 ZNF625Q96I27 306 aaPredicted RBP9.44□□□□□ -0.9
COL9A3-209ENST00000469852 LEPROTO15243 131 aa9.43□□□□□ -0.9
COL9A3-209ENST00000469852 XGP55808 180 aa9.43□□□□□ -0.9
COL9A3-209ENST00000469852 IGKV2-24A0A0C4DH68 120 aa9.42□□□□□ -0.9
COL9A3-209ENST00000469852 LOC107984640A0A0U1RRK4 108 aa9.42□□□□□ -0.9
COL9A3-209ENST00000469852 HERVK_113P61574 105 aa9.42□□□□□ -0.9
COL9A3-209ENST00000469852 RPL18AQ02543 176 aaKnown RBP9.42□□□□□ -0.9
COL9A3-209ENST00000469852 Q6ZRP5 223 aa9.42□□□□□ -0.9
COL9A3-209ENST00000469852 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 E9PLD3 99 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 TLX1NBP0CAT3 122 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 GAGE2BQ13066 116 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 CIRBPQ14011 172 aaKnown RBP9.41□□□□□ -0.9
COL9A3-209ENST00000469852 MAJINQ3KP22 176 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 ANKRD39Q53RE8 183 aa9.41□□□□□ -0.9
COL9A3-209ENST00000469852 J3QQQ9 107 aa9.4□□□□□ -0.9
COL9A3-209ENST00000469852 PTTG1IPP53801 180 aa9.4□□□□□ -0.9
COL9A3-209ENST00000469852 SPACA4Q8TDM5 124 aa9.4□□□□□ -0.9
COL9A3-209ENST00000469852 PLEKHB2Q96CS7 222 aa9.4□□□□□ -0.9
COL9A3-209ENST00000469852 SCGB1D1O95968 90 aa9.39□□□□□ -0.91
COL9A3-209ENST00000469852 SCXQ7RTU7 201 aa9.39□□□□□ -0.91
COL9A3-209ENST00000469852 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
COL9A3-209ENST00000469852 NDUFA12Q9UI09 145 aa9.39□□□□□ -0.91
COL9A3-209ENST00000469852 NDUFC2-KCTD14E9PQ53 114 aa9.38□□□□□ -0.91
COL9A3-209ENST00000469852 CDK2AP2O75956 126 aa9.38□□□□□ -0.91
COL9A3-209ENST00000469852 GAGE2EQ4V326 116 aa9.38□□□□□ -0.91
COL9A3-209ENST00000469852 CIRBP-AS1Q8TBR5 109 aa9.38□□□□□ -0.91
COL9A3-209ENST00000469852 GAGE2DQ9UEU5 116 aa9.38□□□□□ -0.91
COL9A3-209ENST00000469852 LGALS3P17931 250 aaKnown RBP9.37□□□□□ -0.91
COL9A3-209ENST00000469852 PFN2P35080 140 aa9.37□□□□□ -0.91
COL9A3-209ENST00000469852 ERG28Q9UKR5 140 aa9.37□□□□□ -0.91
COL9A3-209ENST00000469852 A0A087WYN8 130 aa9.36□□□□□ -0.91
COL9A3-209ENST00000469852 C9orf129Q5T035 196 aaKnown RBP9.36□□□□□ -0.91
COL9A3-209ENST00000469852 FAT1Q14517 4588 aa9.36□□□□□ -0.91
COL9A3-209ENST00000469852 A0A0U1RRA0 63 aa9.35□□□□□ -0.91
COL9A3-209ENST00000469852 MYMXA0A1B0GTQ4 84 aa9.35□□□□□ -0.91
COL9A3-209ENST00000469852 XAGE1AQ9HD64 81 aa9.35□□□□□ -0.91
COL9A3-209ENST00000469852 PKIGQ9Y2B9 76 aa9.35□□□□□ -0.91
COL9A3-209ENST00000469852 A0A1W2PNN7 141 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 FAM168BA1KXE4 195 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 SMIM13P0DJ93 91 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 AKR1D1P51857 326 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 JOSD1Q15040 202 aaPredicted RBP9.34□□□□□ -0.91
COL9A3-209ENST00000469852 SFTA2Q6UW10 78 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 DPH3Q96FX2 82 aa9.34□□□□□ -0.91
COL9A3-209ENST00000469852 NMUP48645 174 aa9.33□□□□□ -0.92
COL9A3-209ENST00000469852 HERV-K104P63124 156 aa9.33□□□□□ -0.92
COL9A3-209ENST00000469852 KRTAP7-1Q8IUC3 87 aa9.33□□□□□ -0.92
COL9A3-209ENST00000469852 SMR3BP02814 79 aaPredicted RBP9.32□□□□□ -0.92
COL9A3-209ENST00000469852 PYY3Q5JQD4 70 aa9.32□□□□□ -0.92
COL9A3-209ENST00000469852 MEIG1Q5JSS6 88 aa9.32□□□□□ -0.92
COL9A3-209ENST00000469852 PCP2Q8IVA1 136 aa9.32□□□□□ -0.92
COL9A3-209ENST00000469852 PLAC8Q9NZF1 115 aa9.32□□□□□ -0.92
COL9A3-209ENST00000469852 LINC00474Q9P2X8 69 aa9.32□□□□□ -0.92
COL9A3-209ENST00000469852 A0A0J9YXY3 114 aa9.31□□□□□ -0.92
COL9A3-209ENST00000469852 LINC00158P58513 81 aa9.31□□□□□ -0.92
COL9A3-209ENST00000469852 COX17Q14061 63 aa9.31□□□□□ -0.92
COL9A3-209ENST00000469852 ZNF815PA8K554 130 aa9.3□□□□□ -0.92
COL9A3-209ENST00000469852 EPM2AB3EWF7 344 aa9.3□□□□□ -0.92
COL9A3-209ENST00000469852 SERTAD4-AS1Q5TG53 156 aa9.3□□□□□ -0.92
COL9A3-209ENST00000469852 DAND5Q8N907 189 aa9.3□□□□□ -0.92
COL9A3-209ENST00000469852 SND1-IT1Q9HBX3 110 aa9.3□□□□□ -0.92
COL9A3-209ENST00000469852 FAM19A5Q7Z5A7 132 aaPredicted RBP9.29□□□□□ -0.92
COL9A3-209ENST00000469852 MIR7-3HGQ8N6C7 128 aa9.29□□□□□ -0.92
COL9A3-209ENST00000469852 Q8NDZ9 215 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms