RNA–Protein interactions for RNA: ENST00000468676.5

TMEM39A-205, Transcript of transmembrane protein 39A, humanhuman

TSL 3

Gene TMEM39A, Length 935 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-205ENST00000468676 C6orf226Q5I0X4 101 aa9.38□□□□□ -0.91
TMEM39A-205ENST00000468676 UNQ6190/PRO20217Q6UXQ8 127 aa9.38□□□□□ -0.91
TMEM39A-205ENST00000468676 STPG4Q8N801 248 aa9.38□□□□□ -0.91
TMEM39A-205ENST00000468676 H3BRM9 83 aa9.37□□□□□ -0.91
TMEM39A-205ENST00000468676 HSBP1O75506 76 aa9.37□□□□□ -0.91
TMEM39A-205ENST00000468676 GAGE2BQ13066 116 aa9.37□□□□□ -0.91
TMEM39A-205ENST00000468676 TOMM7Q9P0U1 55 aa9.37□□□□□ -0.91
TMEM39A-205ENST00000468676 TLX1NBP0CAT3 122 aa9.36□□□□□ -0.91
TMEM39A-205ENST00000468676 IGLC3P0DOY3 106 aa9.36□□□□□ -0.91
TMEM39A-205ENST00000468676 C10orf25Q5T742 122 aa9.36□□□□□ -0.91
TMEM39A-205ENST00000468676 SMIM1B2RUZ4 78 aa9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 CXCL5P42830 114 aa9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 RPL37AP61513 92 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 RPL18AQ02543 176 aaKnown RBP9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 C7orf33Q8WU49 177 aa9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 C6orf48Q9UBA6 75 aa9.35□□□□□ -0.91
TMEM39A-205ENST00000468676 C2orf82Q6UX34 121 aa9.34□□□□□ -0.91
TMEM39A-205ENST00000468676 IFI27L1Q96BM0 104 aa9.34□□□□□ -0.91
TMEM39A-205ENST00000468676 TRAV12-1A0A0B4J245 112 aa9.33□□□□□ -0.92
TMEM39A-205ENST00000468676 SCO1O75880 301 aa9.33□□□□□ -0.92
TMEM39A-205ENST00000468676 NDUFC2-KCTD14E9PQ53 114 aa9.32□□□□□ -0.92
TMEM39A-205ENST00000468676 F8VRH5 84 aa9.32□□□□□ -0.92
TMEM39A-205ENST00000468676 SERF1AO75920 110 aa9.32□□□□□ -0.92
TMEM39A-205ENST00000468676 FAM19A2Q8N3H0 131 aa9.32□□□□□ -0.92
TMEM39A-205ENST00000468676 COX7B2Q8TF08 81 aa9.32□□□□□ -0.92
TMEM39A-205ENST00000468676 SPINK8P0C7L1 97 aa9.31□□□□□ -0.92
TMEM39A-205ENST00000468676 Q6ZRP5 223 aa9.31□□□□□ -0.92
TMEM39A-205ENST00000468676 CHTOPQ9Y3Y2 248 aaKnown RBP9.31□□□□□ -0.92
TMEM39A-205ENST00000468676 ZNF22P17026 224 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-205ENST00000468676 KRTAP10-4P60372 401 aaPredicted RBP9.3□□□□□ -0.92
TMEM39A-205ENST00000468676 FLG2Q5D862 2391 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-205ENST00000468676 LEPROTL1O95214 131 aa9.29□□□□□ -0.92
TMEM39A-205ENST00000468676 LINC00310P59036 64 aa9.29□□□□□ -0.92
TMEM39A-205ENST00000468676 C9orf116Q5BN46 136 aaPredicted RBP9.29□□□□□ -0.92
TMEM39A-205ENST00000468676 HSPB8Q9UJY1 196 aa9.29□□□□□ -0.92
TMEM39A-205ENST00000468676 IGLV5-39A0A0G2JS06 123 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 A0A1W2PNN7 141 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 C11orf86A6NJI1 115 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 S100A1P23297 94 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 GAGE2EQ4V326 116 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 TMEM170BQ5T4T1 132 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 GAGE2DQ9UEU5 116 aa9.28□□□□□ -0.92
TMEM39A-205ENST00000468676 HIST1H2BKO60814 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BJP06899 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BOP23527 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BBP33778 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BDP58876 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BCP62807 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST2H2BEQ16778 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 SFTA2Q6UW10 78 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BHQ93079 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BNQ99877 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 HIST1H2BMQ99879 126 aa9.26□□□□□ -0.93
TMEM39A-205ENST00000468676 NUPR1O60356 82 aa9.25□□□□□ -0.93
TMEM39A-205ENST00000468676 FABP4P15090 132 aa9.23□□□□□ -0.93
TMEM39A-205ENST00000468676 ODF1Q14990 250 aa9.23□□□□□ -0.93
TMEM39A-205ENST00000468676 TMEM223A0PJW6 202 aa9.22□□□□□ -0.93
TMEM39A-205ENST00000468676 H0Y8G0 127 aa9.22□□□□□ -0.93
TMEM39A-205ENST00000468676 PLNP26678 52 aa9.22□□□□□ -0.93
TMEM39A-205ENST00000468676 PRR3P79522 188 aaKnown RBP9.22□□□□□ -0.93
TMEM39A-205ENST00000468676 C9orf129Q5T035 196 aaKnown RBP9.22□□□□□ -0.93
TMEM39A-205ENST00000468676 FAM168BA1KXE4 195 aa9.21□□□□□ -0.94
TMEM39A-205ENST00000468676 FAM19A5Q7Z5A7 132 aaPredicted RBP9.21□□□□□ -0.94
TMEM39A-205ENST00000468676 MAP1LC3CQ9BXW4 147 aa9.21□□□□□ -0.94
TMEM39A-205ENST00000468676 COX17Q14061 63 aa9.2□□□□□ -0.94
TMEM39A-205ENST00000468676 PHF5AQ7RTV0 110 aaKnown RBP9.2□□□□□ -0.94
TMEM39A-205ENST00000468676 XAGE1AQ9HD64 81 aa9.19□□□□□ -0.94
TMEM39A-205ENST00000468676 MYCBP2O75592 4640 aa9.19□□□□□ -0.94
TMEM39A-205ENST00000468676 DMBT1Q9UGM3 2413 aaPredicted RBP9.19□□□□□ -0.94
TMEM39A-205ENST00000468676 KRTAP29-1A8MX34 341 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 M0QXV9 152 aa9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 ATP6V1G1O75348 118 aa9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 DPM2O94777 84 aa9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 OXTP01178 125 aa9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 COA6Q5JTJ3 125 aaKnown RBP9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 ZNF625Q96I27 306 aaPredicted RBP9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 ERG28Q9UKR5 140 aa9.18□□□□□ -0.94
TMEM39A-205ENST00000468676 HNRNPA3P51991 378 aaKnown RBP9.17□□□□□ -0.94
TMEM39A-205ENST00000468676 LBHQ53QV2 105 aaPredicted RBP9.17□□□□□ -0.94
TMEM39A-205ENST00000468676 KRTAP7-1Q8IUC3 87 aa9.17□□□□□ -0.94
TMEM39A-205ENST00000468676 PFN2P35080 140 aa9.16□□□□□ -0.94
TMEM39A-205ENST00000468676 LCE2CQ5TA81 110 aa9.16□□□□□ -0.94
TMEM39A-205ENST00000468676 TP73-AS1Q9UF72 201 aa9.16□□□□□ -0.94
TMEM39A-205ENST00000468676 PSORS1C2Q9UIG4 136 aa9.16□□□□□ -0.94
TMEM39A-205ENST00000468676 PLA2G2DQ9UNK4 145 aa9.16□□□□□ -0.94
TMEM39A-205ENST00000468676 J3QL48 77 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 IGKCP01834 107 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 HERVK_113P61574 105 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 HERV-K104P63124 156 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 UBE2BP63146 152 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 SERTAD4-AS1Q5TG53 156 aa9.15□□□□□ -0.94
TMEM39A-205ENST00000468676 PKHD1L1Q86WI1 4243 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 LINC00587B1AMM8 73 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 SYS1-DBNDD2H3BUS1 97 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 SPINK6Q6UWN8 80 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 PLEKHB2Q96CS7 222 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 C22orf24Q9Y442 160 aa9.14□□□□□ -0.95
TMEM39A-205ENST00000468676 MYMXA0A1B0GTQ4 84 aa9.13□□□□□ -0.95
TMEM39A-205ENST00000468676 C1orf137Q5JT78 98 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms