RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 COX7B2Q8TF08 81 aa7.31□□□□□ -1.24
MSH5-214ENST00000468602 HERC1Q15751 4861 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.3□□□□□ -1.24
MSH5-214ENST00000468602 NDUFA1O15239 70 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 LEPROTO15243 131 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 SCGB1D1O95968 90 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 TLX1NBP0CAT3 122 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 HERVK_113P61574 105 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 SYCNQ0VAF6 134 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 PLEKHB2Q96CS7 222 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 ZNF625Q96I27 306 aaPredicted RBP7.3□□□□□ -1.24
MSH5-214ENST00000468602 PMCHL2Q9BQD1 86 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 PKIGQ9Y2B9 76 aa7.3□□□□□ -1.24
MSH5-214ENST00000468602 TSTD3H0UI37 97 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 LECT2O14960 151 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 NMUP48645 174 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 HIGD2BQ4VC39 106 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 C6orf226Q5I0X4 101 aa7.29□□□□□ -1.24
MSH5-214ENST00000468602 PRSS2P07478 247 aa7.28□□□□□ -1.24
MSH5-214ENST00000468602 CAMK2N2Q96S95 79 aa7.28□□□□□ -1.24
MSH5-214ENST00000468602 DNAH5Q8TE73 4624 aa7.28□□□□□ -1.24
MSH5-214ENST00000468602 HERV-K104P63124 156 aa7.27□□□□□ -1.25
MSH5-214ENST00000468602 CIRBPQ14011 172 aaKnown RBP7.27□□□□□ -1.25
MSH5-214ENST00000468602 COX17Q14061 63 aa7.27□□□□□ -1.25
MSH5-214ENST00000468602 SDIM1Q6ZPB5 146 aa7.27□□□□□ -1.25
MSH5-214ENST00000468602 Q6ZRU5 148 aa7.27□□□□□ -1.25
MSH5-214ENST00000468602 CARD19Q96LW7 228 aa7.27□□□□□ -1.25
MSH5-214ENST00000468602 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 J3QQQ9 107 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 CKS1BP61024 79 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 UNQ6190/PRO20217Q6UXQ8 127 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 Q6ZSA8 131 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 C6orf48Q9UBA6 75 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 PKHD1P08F94 4074 aa7.26□□□□□ -1.25
MSH5-214ENST00000468602 LINC00587B1AMM8 73 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 EPM2AB3EWF7 344 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 C10orf25Q5T742 122 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 C2orf82Q6UX34 121 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 STPG4Q8N801 248 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 TOMM7Q9P0U1 55 aa7.25□□□□□ -1.25
MSH5-214ENST00000468602 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.24□□□□□ -1.25
MSH5-214ENST00000468602 MYMXA0A1B0GTQ4 84 aa7.24□□□□□ -1.25
MSH5-214ENST00000468602 GCSHP23434 173 aa7.24□□□□□ -1.25
MSH5-214ENST00000468602 TSPEAR-AS2P59090 65 aa7.24□□□□□ -1.25
MSH5-214ENST00000468602 LINC00526Q96FQ7 95 aa7.24□□□□□ -1.25
MSH5-214ENST00000468602 NDUFA12Q9UI09 145 aa7.24□□□□□ -1.25
MSH5-214ENST00000468602 IGKV2D-26A0A0A0MRZ7 120 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 LOC107984640A0A0U1RRK4 108 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 C16orf90A8MZG2 172 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 NDUFC2-KCTD14E9PQ53 114 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 ANKRD39Q53RE8 183 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 VAMP8Q9BV40 100 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 LINC00474Q9P2X8 69 aa7.23□□□□□ -1.25
MSH5-214ENST00000468602 LOC107984156A0A0G2JMH3 177 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 HSBP1L1C9JCN9 74 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 DLEU1O43261 78 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 TIMM17BO60830 172 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 ARL17AQ8IVW1 177 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 PPDPFQ9H3Y8 114 aa7.22□□□□□ -1.25
MSH5-214ENST00000468602 DYNC1H1Q14204 4646 aaKnown RBP7.21□□□□□ -1.25
MSH5-214ENST00000468602 DNAH8Q96JB1 4490 aa7.21□□□□□ -1.25
MSH5-214ENST00000468602 LGALS3P17931 250 aaKnown RBP7.21□□□□□ -1.26
MSH5-214ENST00000468602 DDTP30046 118 aa7.21□□□□□ -1.26
MSH5-214ENST00000468602 ATOH7Q8N100 152 aa7.21□□□□□ -1.26
MSH5-214ENST00000468602 LRP1BQ9NZR2 4599 aa7.21□□□□□ -1.26
MSH5-214ENST00000468602 PTTG1IPP53801 180 aa7.2□□□□□ -1.26
MSH5-214ENST00000468602 KRTAP10-1P60331 282 aa7.2□□□□□ -1.26
MSH5-214ENST00000468602 ERG28Q9UKR5 140 aa7.2□□□□□ -1.26
MSH5-214ENST00000468602 A0A0J9YXY3 114 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 MAJINQ3KP22 176 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 Q6ZRP5 223 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 BOD1L2Q8IYS8 172 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 SPACA4Q8TDM5 124 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 PRO1933Q9H354 126 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 PLA2G2DQ9UNK4 145 aa7.19□□□□□ -1.26
MSH5-214ENST00000468602 COX8AP10176 69 aa7.18□□□□□ -1.26
MSH5-214ENST00000468602 LITAFQ99732 161 aa7.18□□□□□ -1.26
MSH5-214ENST00000468602 A0A096LNI7 61 aa7.17□□□□□ -1.26
MSH5-214ENST00000468602 ZNF815PA8K554 130 aa7.17□□□□□ -1.26
MSH5-214ENST00000468602 CDK2AP2O75956 126 aa7.17□□□□□ -1.26
MSH5-214ENST00000468602 C9orf116Q5BN46 136 aaPredicted RBP7.17□□□□□ -1.26
MSH5-214ENST00000468602 Q6ZVH6 145 aa7.17□□□□□ -1.26
MSH5-214ENST00000468602 PLAC8Q9NZF1 115 aa7.17□□□□□ -1.26
MSH5-214ENST00000468602 PCP2Q8IVA1 136 aa7.16□□□□□ -1.26
MSH5-214ENST00000468602 MIEN1Q9BRT3 115 aa7.16□□□□□ -1.26
MSH5-214ENST00000468602 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
MSH5-214ENST00000468602 IGLV5-37A0A075B6J1 123 aa7.15□□□□□ -1.26
MSH5-214ENST00000468602 FUSP35637 526 aaKnown RBP eCLIP7.15□□□□□ -1.26
MSH5-214ENST00000468602 SPATA45Q537H7 98 aa7.15□□□□□ -1.26
MSH5-214ENST00000468602 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.15□□□□□ -1.26
MSH5-214ENST00000468602 PANO1I0J062 215 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 SMIM13P0DJ93 91 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 LINC01620Q4KN68 170 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 LBHQ53QV2 105 aaPredicted RBP7.14□□□□□ -1.27
MSH5-214ENST00000468602 MEIG1Q5JSS6 88 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 C9orf129Q5T035 196 aaKnown RBP7.14□□□□□ -1.27
MSH5-214ENST00000468602 SPANXDQ9BXN6 97 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 TTTY13Q9BZ97 58 aa7.14□□□□□ -1.27
MSH5-214ENST00000468602 SPANXB1Q9NS25 103 aaPredicted RBP7.14□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 320 ms