RNA–Protein interactions for RNA: ENST00000468380.1

LINC00888-201, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 1,241 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-201ENST00000468380 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
LINC00888-201ENST00000468380 SRSF3P84103 164 aaKnown RBP10.61□□□□□ -0.71
LINC00888-201ENST00000468380 AMELXQ99217 191 aa10.61□□□□□ -0.71
LINC00888-201ENST00000468380 F8VRH5 84 aa10.6□□□□□ -0.71
LINC00888-201ENST00000468380 PNRC1Q12796 327 aaPredicted RBP10.6□□□□□ -0.71
LINC00888-201ENST00000468380 ALKAL2Q6UX46 152 aa10.6□□□□□ -0.71
LINC00888-201ENST00000468380 C3orf22Q8N5N4 141 aa10.6□□□□□ -0.71
LINC00888-201ENST00000468380 A0A1B0GW15 77 aa10.59□□□□□ -0.71
LINC00888-201ENST00000468380 RPL23P62829 140 aaKnown RBP10.59□□□□□ -0.71
LINC00888-201ENST00000468380 KRTAP13-3Q3SY46 172 aa10.59□□□□□ -0.71
LINC00888-201ENST00000468380 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
LINC00888-201ENST00000468380 MRPL54Q6P161 138 aaKnown RBP10.58□□□□□ -0.72
LINC00888-201ENST00000468380 C2orf66Q6UXQ4 117 aa10.58□□□□□ -0.72
LINC00888-201ENST00000468380 FAM19A3Q7Z5A8 133 aa10.58□□□□□ -0.72
LINC00888-201ENST00000468380 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
LINC00888-201ENST00000468380 IGLV5-37A0A075B6J1 123 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 A0A1B0GXF2 115 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 SCO1O75880 301 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 PPBPP02775 128 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 LINC00337Q8N6G1 96 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 VCX2Q9H322 139 aa10.57□□□□□ -0.72
LINC00888-201ENST00000468380 PRLHP81277 87 aa10.56□□□□□ -0.72
LINC00888-201ENST00000468380 TMEM136Q6ZRR5 245 aa10.56□□□□□ -0.72
LINC00888-201ENST00000468380 TCTE3Q8IZS6 198 aa10.56□□□□□ -0.72
LINC00888-201ENST00000468380 F8W036 122 aa10.55□□□□□ -0.72
LINC00888-201ENST00000468380 LCE2CQ5TA81 110 aa10.55□□□□□ -0.72
LINC00888-201ENST00000468380 ORMDL3Q8N138 153 aa10.55□□□□□ -0.72
LINC00888-201ENST00000468380 PRELID3AQ96N28 172 aa10.55□□□□□ -0.72
LINC00888-201ENST00000468380 IGKV2-28A0A075B6P5 120 aa10.54□□□□□ -0.72
LINC00888-201ENST00000468380 LOC389332A0A1B0GUA5 103 aa10.54□□□□□ -0.72
LINC00888-201ENST00000468380 PRSS47A8MTI9 375 aa10.54□□□□□ -0.72
LINC00888-201ENST00000468380 IGKV2D-28P01615 120 aa10.54□□□□□ -0.72
LINC00888-201ENST00000468380 ADIRFQ15847 76 aa10.54□□□□□ -0.72
LINC00888-201ENST00000468380 FP248Q71RG6 208 aaPredicted RBP10.54□□□□□ -0.72
LINC00888-201ENST00000468380 IGIPA6NJ69 53 aa10.53□□□□□ -0.72
LINC00888-201ENST00000468380 PLEKHB2Q96CS7 222 aa10.53□□□□□ -0.72
LINC00888-201ENST00000468380 CYSLTR1Q9Y271 337 aa10.52□□□□□ -0.73
LINC00888-201ENST00000468380 S100A8P05109 93 aa10.51□□□□□ -0.73
LINC00888-201ENST00000468380 RAB5BP61020 215 aa10.51□□□□□ -0.73
LINC00888-201ENST00000468380 SPAG11AQ6PDA7 123 aa10.51□□□□□ -0.73
LINC00888-201ENST00000468380 NKAPP1Q8N9T2 125 aa10.51□□□□□ -0.73
LINC00888-201ENST00000468380 C9JQL5 133 aa10.5□□□□□ -0.73
LINC00888-201ENST00000468380 CXCL5P42830 114 aa10.5□□□□□ -0.73
LINC00888-201ENST00000468380 HERVK_113P63121 156 aa10.5□□□□□ -0.73
LINC00888-201ENST00000468380 FAM19A1Q7Z5A9 133 aa10.5□□□□□ -0.73
LINC00888-201ENST00000468380 TMEM238C9JI98 176 aa10.49□□□□□ -0.73
LINC00888-201ENST00000468380 SEC61BP60468 96 aaKnown RBP10.49□□□□□ -0.73
LINC00888-201ENST00000468380 SMIM1B2RUZ4 78 aa10.48□□□□□ -0.73
LINC00888-201ENST00000468380 Q8N8P6 123 aa10.48□□□□□ -0.73
LINC00888-201ENST00000468380 TMEM126AQ9H061 195 aa10.48□□□□□ -0.73
LINC00888-201ENST00000468380 GEMIN7Q9H840 131 aaKnown RBP10.48□□□□□ -0.73
LINC00888-201ENST00000468380 NAT8Q9UHE5 227 aa10.48□□□□□ -0.73
LINC00888-201ENST00000468380 NPSP0C0P6 89 aa10.47□□□□□ -0.73
LINC00888-201ENST00000468380 SEC11AP67812 179 aa10.46□□□□□ -0.73
LINC00888-201ENST00000468380 COX7B2Q8TF08 81 aa10.46□□□□□ -0.73
LINC00888-201ENST00000468380 MAP1LC3AQ9H492 121 aa10.46□□□□□ -0.73
LINC00888-201ENST00000468380 M0R378 163 aa10.45□□□□□ -0.74
LINC00888-201ENST00000468380 KRTAP19-2Q3LHN2 52 aa10.45□□□□□ -0.74
LINC00888-201ENST00000468380 PDZD11Q5EBL8 140 aa10.44□□□□□ -0.74
LINC00888-201ENST00000468380 CBLN2Q8IUK8 224 aa10.44□□□□□ -0.74
LINC00888-201ENST00000468380 DAND5Q8N907 189 aa10.44□□□□□ -0.74
LINC00888-201ENST00000468380 ORMDL2Q53FV1 153 aa10.43□□□□□ -0.74
LINC00888-201ENST00000468380 LAMTOR2Q9Y2Q5 125 aa10.43□□□□□ -0.74
LINC00888-201ENST00000468380 VPREB1P12018 145 aa10.42□□□□□ -0.74
LINC00888-201ENST00000468380 C4orf48Q5BLP8 95 aa10.42□□□□□ -0.74
LINC00888-201ENST00000468380 MT1HP80294 61 aa10.41□□□□□ -0.74
LINC00888-201ENST00000468380 SPRR4Q96PI1 79 aa10.41□□□□□ -0.74
LINC00888-201ENST00000468380 ATP5L2Q7Z4Y8 100 aa10.4□□□□□ -0.74
LINC00888-201ENST00000468380 Q8NBF4 154 aa10.4□□□□□ -0.74
LINC00888-201ENST00000468380 Q8NDZ9 215 aa10.4□□□□□ -0.74
LINC00888-201ENST00000468380 HIGD2AQ9BW72 106 aa10.4□□□□□ -0.74
LINC00888-201ENST00000468380 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
LINC00888-201ENST00000468380 PAPPA-AS1Q5QFB9 102 aa10.39□□□□□ -0.75
LINC00888-201ENST00000468380 TIMM17AQ99595 171 aa10.39□□□□□ -0.75
LINC00888-201ENST00000468380 GNB1LQ9BYB4 327 aa10.39□□□□□ -0.75
LINC00888-201ENST00000468380 TINCRA0A1B0GVN0 87 aa10.38□□□□□ -0.75
LINC00888-201ENST00000468380 SPINK8P0C7L1 97 aa10.38□□□□□ -0.75
LINC00888-201ENST00000468380 PFN2P35080 140 aa10.37□□□□□ -0.75
LINC00888-201ENST00000468380 TOMM6Q96B49 74 aa10.37□□□□□ -0.75
LINC00888-201ENST00000468380 K7EMI3 77 aa10.36□□□□□ -0.75
LINC00888-201ENST00000468380 ADCYAP1P18509 176 aa10.36□□□□□ -0.75
LINC00888-201ENST00000468380 SND1-IT1Q9HBX3 110 aa10.36□□□□□ -0.75
LINC00888-201ENST00000468380 XP32Q5T750 250 aa10.35□□□□□ -0.75
LINC00888-201ENST00000468380 SPINK1P00995 79 aa10.34□□□□□ -0.75
LINC00888-201ENST00000468380 LORP23490 312 aaPredicted RBP10.34□□□□□ -0.75
LINC00888-201ENST00000468380 ATP5LO75964 103 aa10.33□□□□□ -0.76
LINC00888-201ENST00000468380 RAB14P61106 215 aa10.33□□□□□ -0.76
LINC00888-201ENST00000468380 ERASQ7Z444 233 aa10.33□□□□□ -0.76
LINC00888-201ENST00000468380 NXT2Q9NPJ8 142 aaKnown RBP10.33□□□□□ -0.76
LINC00888-201ENST00000468380 SCGB3A1Q96QR1 104 aa10.32□□□□□ -0.76
LINC00888-201ENST00000468380 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
LINC00888-201ENST00000468380 CST9LQ9H4G1 147 aa10.31□□□□□ -0.76
LINC00888-201ENST00000468380 CFC1BP0CG36 223 aa10.3□□□□□ -0.76
LINC00888-201ENST00000468380 KRTAP10-6P60371 365 aaPredicted RBP10.3□□□□□ -0.76
LINC00888-201ENST00000468380 PEA15Q15121 130 aa10.3□□□□□ -0.76
LINC00888-201ENST00000468380 Q8N377 158 aa10.3□□□□□ -0.76
LINC00888-201ENST00000468380 G0S2P27469 103 aa10.29□□□□□ -0.76
LINC00888-201ENST00000468380 A0A1B0GVG6 124 aa10.28□□□□□ -0.76
LINC00888-201ENST00000468380 ERG28Q9UKR5 140 aa10.28□□□□□ -0.76
LINC00888-201ENST00000468380 ZNF706Q9Y5V0 76 aaPredicted RBP10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 112.9 ms