RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 C11orf86A6NJI1 115 aa7.01□□□□□ -1.29
MSH5-212ENST00000467319 ZNF22P17026 224 aaPredicted RBP7.01□□□□□ -1.29
MSH5-212ENST00000467319 Q5VSD8 79 aa7.01□□□□□ -1.29
MSH5-212ENST00000467319 C2orf82Q6UX34 121 aa7.01□□□□□ -1.29
MSH5-212ENST00000467319 UNQ6190/PRO20217Q6UXQ8 127 aa7.01□□□□□ -1.29
MSH5-212ENST00000467319 PACRGQ96M98 296 aaPredicted RBP7.01□□□□□ -1.29
MSH5-212ENST00000467319 PLAC8Q9NZF1 115 aa7.01□□□□□ -1.29
MSH5-212ENST00000467319 MYCBP2O75592 4640 aa7□□□□□ -1.29
MSH5-212ENST00000467319 TRBV30A0A0K0K1B3 111 aa7□□□□□ -1.29
MSH5-212ENST00000467319 LOC107984640A0A0U1RRK4 108 aa7□□□□□ -1.29
MSH5-212ENST00000467319 SMR3BP02814 79 aaPredicted RBP7□□□□□ -1.29
MSH5-212ENST00000467319 TLX1NBP0CAT3 122 aa7□□□□□ -1.29
MSH5-212ENST00000467319 PTTG1IPP53801 180 aa7□□□□□ -1.29
MSH5-212ENST00000467319 NDUFA6P56556 154 aa7□□□□□ -1.29
MSH5-212ENST00000467319 COA6Q5JTJ3 125 aaKnown RBP7□□□□□ -1.29
MSH5-212ENST00000467319 LINC00528Q8N1L1 170 aa7□□□□□ -1.29
MSH5-212ENST00000467319 LINC00474Q9P2X8 69 aa7□□□□□ -1.29
MSH5-212ENST00000467319 A0A087WYN8 130 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 IGKV2-24A0A0C4DH68 120 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 EPM2AB3EWF7 344 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 F8VRH5 84 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 H3BRM9 83 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 LEPROTL1O95214 131 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 SPINK8P0C7L1 97 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 ODF1Q14990 250 aa6.99□□□□□ -1.29
MSH5-212ENST00000467319 CHTOPQ9Y3Y2 248 aaKnown RBP6.99□□□□□ -1.29
MSH5-212ENST00000467319 PRSS2P07478 247 aa6.98□□□□□ -1.29
MSH5-212ENST00000467319 CXCL5P42830 114 aa6.98□□□□□ -1.29
MSH5-212ENST00000467319 KRTAP10-4P60372 401 aaPredicted RBP6.98□□□□□ -1.29
MSH5-212ENST00000467319 COX7B2Q8TF08 81 aa6.98□□□□□ -1.29
MSH5-212ENST00000467319 TOMM7Q9P0U1 55 aa6.98□□□□□ -1.29
MSH5-212ENST00000467319 HSPB8Q9UJY1 196 aa6.98□□□□□ -1.29
MSH5-212ENST00000467319 MAJINQ3KP22 176 aa6.97□□□□□ -1.29
MSH5-212ENST00000467319 Q6ZRP5 223 aa6.97□□□□□ -1.29
MSH5-212ENST00000467319 NDUFC2-KCTD14E9PQ53 114 aa6.96□□□□□ -1.3
MSH5-212ENST00000467319 FAM229AH3BQW9 127 aa6.96□□□□□ -1.3
MSH5-212ENST00000467319 CKS1BP61024 79 aa6.96□□□□□ -1.3
MSH5-212ENST00000467319 RPL18AQ02543 176 aaKnown RBP6.96□□□□□ -1.3
MSH5-212ENST00000467319 C6orf226Q5I0X4 101 aa6.96□□□□□ -1.3
MSH5-212ENST00000467319 GAGE2BQ13066 116 aa6.95□□□□□ -1.3
MSH5-212ENST00000467319 C9orf116Q5BN46 136 aaPredicted RBP6.95□□□□□ -1.3
MSH5-212ENST00000467319 TMEM170BQ5T4T1 132 aa6.95□□□□□ -1.3
MSH5-212ENST00000467319 STPG4Q8N801 248 aa6.95□□□□□ -1.3
MSH5-212ENST00000467319 TMEM223A0PJW6 202 aa6.94□□□□□ -1.3
MSH5-212ENST00000467319 FABP4P15090 132 aa6.94□□□□□ -1.3
MSH5-212ENST00000467319 A0A1W2PNN7 141 aa6.93□□□□□ -1.3
MSH5-212ENST00000467319 H0Y8G0 127 aa6.93□□□□□ -1.3
MSH5-212ENST00000467319 PLA2G1BP04054 148 aaKnown RBP6.93□□□□□ -1.3
MSH5-212ENST00000467319 PLNP26678 52 aa6.93□□□□□ -1.3
MSH5-212ENST00000467319 FAT3Q8TDW7 4589 aa6.92□□□□□ -1.3
MSH5-212ENST00000467319 C9orf129Q5T035 196 aaKnown RBP6.92□□□□□ -1.3
MSH5-212ENST00000467319 KRTAP7-1Q8IUC3 87 aa6.92□□□□□ -1.3
MSH5-212ENST00000467319 ZNF625Q96I27 306 aaPredicted RBP6.92□□□□□ -1.3
MSH5-212ENST00000467319 MAP1LC3CQ9BXW4 147 aa6.92□□□□□ -1.3
MSH5-212ENST00000467319 SYS1-DBNDD2H3BUS1 97 aa6.91□□□□□ -1.3
MSH5-212ENST00000467319 DPM2O94777 84 aa6.91□□□□□ -1.3
MSH5-212ENST00000467319 RPL37AP61513 92 aaKnown RBP6.91□□□□□ -1.3
MSH5-212ENST00000467319 SFTA2Q6UW10 78 aa6.91□□□□□ -1.3
MSH5-212ENST00000467319 DPH3Q96FX2 82 aa6.91□□□□□ -1.3
MSH5-212ENST00000467319 FAM168BA1KXE4 195 aa6.9□□□□□ -1.3
MSH5-212ENST00000467319 GAGE2EQ4V326 116 aa6.9□□□□□ -1.3
MSH5-212ENST00000467319 LINC01545Q5VT33 79 aa6.9□□□□□ -1.3
MSH5-212ENST00000467319 PMCHL2Q9BQD1 86 aa6.9□□□□□ -1.3
MSH5-212ENST00000467319 GAGE2DQ9UEU5 116 aa6.9□□□□□ -1.3
MSH5-212ENST00000467319 FLG2Q5D862 2391 aaPredicted RBP6.9□□□□□ -1.31
MSH5-212ENST00000467319 TSPEAR-AS2P59090 65 aa6.89□□□□□ -1.31
MSH5-212ENST00000467319 PRR3P79522 188 aaKnown RBP6.89□□□□□ -1.31
MSH5-212ENST00000467319 C7orf33Q8WU49 177 aa6.89□□□□□ -1.31
MSH5-212ENST00000467319 LRP1Q07954 4544 aaKnown RBP6.88□□□□□ -1.31
MSH5-212ENST00000467319 IGKCP01834 107 aa6.88□□□□□ -1.31
MSH5-212ENST00000467319 PET117Q6UWS5 81 aa6.88□□□□□ -1.31
MSH5-212ENST00000467319 XAGE1AQ9HD64 81 aa6.88□□□□□ -1.31
MSH5-212ENST00000467319 C3orf79P0CE67 100 aa6.87□□□□□ -1.31
MSH5-212ENST00000467319 INAFM2P0DMQ5 153 aa6.87□□□□□ -1.31
MSH5-212ENST00000467319 HNRNPA3P51991 378 aaKnown RBP6.87□□□□□ -1.31
MSH5-212ENST00000467319 SERTAD4-AS1Q5TG53 156 aa6.87□□□□□ -1.31
MSH5-212ENST00000467319 FAM19A5Q7Z5A7 132 aaPredicted RBP6.87□□□□□ -1.31
MSH5-212ENST00000467319 ERG28Q9UKR5 140 aa6.87□□□□□ -1.31
MSH5-212ENST00000467319 M0QXV9 152 aa6.86□□□□□ -1.31
MSH5-212ENST00000467319 COX17Q14061 63 aa6.86□□□□□ -1.31
MSH5-212ENST00000467319 PHF5AQ7RTV0 110 aaKnown RBP6.86□□□□□ -1.31
MSH5-212ENST00000467319 HIST3H2BBQ8N257 126 aa6.86□□□□□ -1.31
MSH5-212ENST00000467319 LEPROTO15243 131 aa6.85□□□□□ -1.31
MSH5-212ENST00000467319 HERVK_113P61574 105 aa6.85□□□□□ -1.31
MSH5-212ENST00000467319 PLEKHB2Q96CS7 222 aa6.85□□□□□ -1.31
MSH5-212ENST00000467319 PLA2G2DQ9UNK4 145 aa6.85□□□□□ -1.31
MSH5-212ENST00000467319 HERC1Q15751 4861 aa6.85□□□□□ -1.31
MSH5-212ENST00000467319 IGLV5-37A0A075B6J1 123 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 J3QQQ9 107 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 PFN2P35080 140 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 KRTDAPP60985 99 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 HERV-K104P63124 156 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 KRTAP11-1Q8IUC1 163 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 HIST1H2BLQ99880 126 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 SND1-IT1Q9HBX3 110 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 TP73-AS1Q9UF72 201 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 NDUFA12Q9UI09 145 aa6.84□□□□□ -1.31
MSH5-212ENST00000467319 DMBT1Q9UGM3 2413 aaPredicted RBP6.84□□□□□ -1.32
MSH5-212ENST00000467319 E9PLD3 99 aa6.83□□□□□ -1.32
MSH5-212ENST00000467319 PSORS1C2Q9UIG4 136 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms